Protein–RNA interactions for Protein: P32500

NDC1, Nucleoporin NDC1, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDC1P32500 NSR1YGR159C 1245 nt18.39■□□□□ 0.53
NDC1P32500 YML009W-BYML009W-B 477 nt18.14■□□□□ 0.49
NDC1P32500 NOP1YDL014W 984 nt17.44■□□□□ 0.38
NDC1P32500 MDJ1YFL016C 1536 nt16.75■□□□□ 0.27
NDC1P32500 YKL036CYKL036C 393 nt15.72■□□□□ 0.11
NDC1P32500 YJL027CYJL027C 417 nt15.38■□□□□ 0.05
NDC1P32500 SRX1YKL086W 384 nt15.26■□□□□ 0.03
NDC1P32500 Q0297Q0297 156 nt15.16■□□□□ 0.02
NDC1P32500 DBP2YNL112W 1641 nt14.68□□□□□ -0.06
NDC1P32500 YCR051WYCR051W 669 nt14.43□□□□□ -0.1
NDC1P32500 YBR190WYBR190W 312 nt14.37□□□□□ -0.11
NDC1P32500 SCS3YGL126W 1143 nt14.12□□□□□ -0.15
NDC1P32500 TRN1tP(UGG)A 72 nt14.07□□□□□ -0.16
NDC1P32500 SUF9tP(UGG)F 72 nt14.07□□□□□ -0.16
NDC1P32500 SUF8tP(UGG)H 72 nt14.07□□□□□ -0.16
NDC1P32500 tP(UGG)LtP(UGG)L 72 nt14.07□□□□□ -0.16
NDC1P32500 SUF7tP(UGG)M 72 nt14.07□□□□□ -0.16
NDC1P32500 tP(UGG)N1tP(UGG)N1 72 nt14.07□□□□□ -0.16
NDC1P32500 tP(UGG)N2tP(UGG)N2 72 nt14.07□□□□□ -0.16
NDC1P32500 tP(UGG)O1tP(UGG)O1 72 nt14.07□□□□□ -0.16
NDC1P32500 SUF11tP(UGG)O2 72 nt14.07□□□□□ -0.16
NDC1P32500 RTC3YHR087W 336 nt14□□□□□ -0.17
NDC1P32500 CCC1YLR220W 969 nt13.89□□□□□ -0.19
NDC1P32500 SSA3YBL075C 1950 nt13.8□□□□□ -0.2
NDC1P32500 YOL085CYOL085C 342 nt13.65□□□□□ -0.22
NDC1P32500 RVS167YDR388W 1449 nt13.64□□□□□ -0.23
NDC1P32500 RPP1BYDL130W 321 nt13.6□□□□□ -0.23
NDC1P32500 SCJ1YMR214W 1134 nt13.55□□□□□ -0.24
NDC1P32500 PKP1YIL042C 1185 nt13.49□□□□□ -0.25
NDC1P32500 PUT4YOR348C 1884 nt13.41□□□□□ -0.26
NDC1P32500 tP(UGG)O3tP(UGG)O3 72 nt13.16□□□□□ -0.3
NDC1P32500 SHR5YOL110W 714 nt13.09□□□□□ -0.31
NDC1P32500 PET122YER153C 765 nt13.06□□□□□ -0.32
NDC1P32500 ARE1YCR048W 1833 nt13.04□□□□□ -0.32
NDC1P32500 URN1YPR152C 1398 nt12.98□□□□□ -0.33
NDC1P32500 POA1YBR022W 534 nt12.93□□□□□ -0.34
NDC1P32500 SAH1YER043C 1350 nt12.92□□□□□ -0.34
NDC1P32500 OPI9YLR338W 858 nt12.88□□□□□ -0.35
NDC1P32500 DEP1YAL013W 1218 nt12.86□□□□□ -0.35
NDC1P32500 YHR049C-AYHR049C-A 297 nt12.85□□□□□ -0.35
NDC1P32500 SCR1SCR1 522 nt12.76□□□□□ -0.37
NDC1P32500 BSC6YOL137W 1494 nt12.73□□□□□ -0.37
NDC1P32500 YDJ1YNL064C 1230 nt12.73□□□□□ -0.37
NDC1P32500 RPN10YHR200W 807 nt12.66□□□□□ -0.38
NDC1P32500 RRN5YLR141W 1092 nt12.62□□□□□ -0.39
NDC1P32500 YNL208WYNL208W 600 nt12.6□□□□□ -0.39
NDC1P32500 SPT5YML010W 3192 nt12.53□□□□□ -0.4
NDC1P32500 GAR1YHR089C 618 nt12.5□□□□□ -0.41
NDC1P32500 ATS1YAL020C 1002 nt12.5□□□□□ -0.41
NDC1P32500 BUD23YCR047C 828 nt12.49□□□□□ -0.41
NDC1P32500 PUN1YLR414C 792 nt12.48□□□□□ -0.41
NDC1P32500 PTC2YER089C 1395 nt12.42□□□□□ -0.42
NDC1P32500 YER088W-BYER088W-B 147 nt12.39□□□□□ -0.43
NDC1P32500 YJR018WYJR018W 363 nt12.34□□□□□ -0.43
NDC1P32500 NAB2YGL122C 1578 nt12.31□□□□□ -0.44
NDC1P32500 SSA4YER103W 1929 nt12.23□□□□□ -0.45
NDC1P32500 RSB1YOR049C 1065 nt12.22□□□□□ -0.45
NDC1P32500 FIS1YIL065C 468 nt12.15□□□□□ -0.46
NDC1P32500 YJR120WYJR120W 351 nt12.14□□□□□ -0.47
NDC1P32500 TIR1YER011W 765 nt12.11□□□□□ -0.47
NDC1P32500 SSA1YAL005C 1929 nt12.08□□□□□ -0.48
NDC1P32500 DAL1YIR027C 1383 nt12.07□□□□□ -0.48
NDC1P32500 FPR4YLR449W 1179 nt12.01□□□□□ -0.49
NDC1P32500 MEP2YNL142W 1500 nt12.01□□□□□ -0.49
NDC1P32500 PHO4YFR034C 939 nt11.97□□□□□ -0.49
NDC1P32500 RPP2BYDR382W 333 nt11.96□□□□□ -0.49
NDC1P32500 INM2YDR287W 879 nt11.94□□□□□ -0.5
NDC1P32500 YPS1YLR120C 1710 nt11.9□□□□□ -0.5
NDC1P32500 SRB2YHR041C 633 nt11.85□□□□□ -0.51
NDC1P32500 DCW1YKL046C 1350 nt11.82□□□□□ -0.52
NDC1P32500 BDF1YLR399C 2061 nt11.82□□□□□ -0.52
NDC1P32500 YBL100CYBL100C 315 nt11.78□□□□□ -0.52
NDC1P32500 YDR095CYDR095C 411 nt11.76□□□□□ -0.53
NDC1P32500 YHR165W-AYHR165W-A 312 nt11.76□□□□□ -0.53
NDC1P32500 BDH2YAL061W 1254 nt11.68□□□□□ -0.54
NDC1P32500 PST2YDR032C 597 nt11.66□□□□□ -0.54
NDC1P32500 TAT1YBR069C 1860 nt11.66□□□□□ -0.54
NDC1P32500 PAC11YDR488C 1602 nt11.65□□□□□ -0.54
NDC1P32500 FUN26YAL022C 1554 nt11.64□□□□□ -0.55
NDC1P32500 EMI2YDR516C 1503 nt11.64□□□□□ -0.55
NDC1P32500 YBR220CYBR220C 1683 nt11.59□□□□□ -0.55
NDC1P32500 PTP1YDL230W 1008 nt11.56□□□□□ -0.56
NDC1P32500 CAC2YML102W 1407 nt11.53□□□□□ -0.56
NDC1P32500 YDL221WYDL221W 552 nt11.53□□□□□ -0.56
NDC1P32500 YMR090WYMR090W 684 nt11.53□□□□□ -0.56
NDC1P32500 ALF1YNL148C 765 nt11.52□□□□□ -0.57
NDC1P32500 RPP2AYOL039W 321 nt11.52□□□□□ -0.57
NDC1P32500 WWM1YFL010C 636 nt11.51□□□□□ -0.57
NDC1P32500 TRM9YML014W 840 nt11.5□□□□□ -0.57
NDC1P32500 SDH1YKL148C 1923 nt11.46□□□□□ -0.58
NDC1P32500 CCT6YDR188W 1641 nt11.46□□□□□ -0.58
NDC1P32500 LSM3YLR438C-A 270 nt11.45□□□□□ -0.58
NDC1P32500 NVJ2YPR091C 2313 nt11.43□□□□□ -0.58
NDC1P32500 SIS1YNL007C 1059 nt11.4□□□□□ -0.58
NDC1P32500 IRC15YPL017C 1500 nt11.37□□□□□ -0.59
NDC1P32500 SUF2tP(AGG)C 72 nt11.35□□□□□ -0.59
NDC1P32500 SUF10tP(AGG)N 72 nt11.35□□□□□ -0.59
NDC1P32500 SCC4YER147C 1875 nt11.33□□□□□ -0.6
NDC1P32500 YFL021C-AYFL021C-A 855 nt11.32□□□□□ -0.6
NDC1P32500 YGR021WYGR021W 873 nt11.3□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms