Protein–RNA interactions for Protein: P30619

SEC1, Protein transport protein SEC1, yeastyeast

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC1P30619 YML009W-BYML009W-B 477 nt21.43■■□□□ 1.02
SEC1P30619 NSR1YGR159C 1245 nt21.32■■□□□ 1
SEC1P30619 NOP1YDL014W 984 nt20.8■□□□□ 0.92
SEC1P30619 YKL036CYKL036C 393 nt19.16■□□□□ 0.66
SEC1P30619 MDJ1YFL016C 1536 nt18.98■□□□□ 0.63
SEC1P30619 Q0297Q0297 156 nt18.2■□□□□ 0.5
SEC1P30619 SRX1YKL086W 384 nt18.19■□□□□ 0.5
SEC1P30619 YJL027CYJL027C 417 nt17.88■□□□□ 0.45
SEC1P30619 SCS3YGL126W 1143 nt17.42■□□□□ 0.38
SEC1P30619 YCR051WYCR051W 669 nt17.24■□□□□ 0.35
SEC1P30619 DBP2YNL112W 1641 nt16.78■□□□□ 0.28
SEC1P30619 YOL085CYOL085C 342 nt16.58■□□□□ 0.24
SEC1P30619 TRN1tP(UGG)A 72 nt16.49■□□□□ 0.23
SEC1P30619 SUF9tP(UGG)F 72 nt16.49■□□□□ 0.23
SEC1P30619 SUF8tP(UGG)H 72 nt16.49■□□□□ 0.23
SEC1P30619 tP(UGG)LtP(UGG)L 72 nt16.49■□□□□ 0.23
SEC1P30619 SUF7tP(UGG)M 72 nt16.49■□□□□ 0.23
SEC1P30619 tP(UGG)N1tP(UGG)N1 72 nt16.49■□□□□ 0.23
SEC1P30619 tP(UGG)N2tP(UGG)N2 72 nt16.49■□□□□ 0.23
SEC1P30619 tP(UGG)O1tP(UGG)O1 72 nt16.49■□□□□ 0.23
SEC1P30619 SUF11tP(UGG)O2 72 nt16.49■□□□□ 0.23
SEC1P30619 PKP1YIL042C 1185 nt16.34■□□□□ 0.21
SEC1P30619 RPP1BYDL130W 321 nt16.33■□□□□ 0.2
SEC1P30619 CCC1YLR220W 969 nt16.29■□□□□ 0.2
SEC1P30619 YBR190WYBR190W 312 nt16.19■□□□□ 0.18
SEC1P30619 RTC3YHR087W 336 nt15.82■□□□□ 0.12
SEC1P30619 RVS167YDR388W 1449 nt15.78■□□□□ 0.12
SEC1P30619 SCJ1YMR214W 1134 nt15.7■□□□□ 0.1
SEC1P30619 PET122YER153C 765 nt15.61■□□□□ 0.09
SEC1P30619 tP(UGG)O3tP(UGG)O3 72 nt15.56■□□□□ 0.08
SEC1P30619 ATS1YAL020C 1002 nt15.55■□□□□ 0.08
SEC1P30619 SCR1SCR1 522 nt15.44■□□□□ 0.06
SEC1P30619 SHR5YOL110W 714 nt15.22■□□□□ 0.03
SEC1P30619 RRN5YLR141W 1092 nt15.14■□□□□ 0.01
SEC1P30619 YDJ1YNL064C 1230 nt15.05■□□□□ -0
SEC1P30619 YER088W-BYER088W-B 147 nt14.84□□□□□ -0.03
SEC1P30619 RSB1YOR049C 1065 nt14.84□□□□□ -0.03
SEC1P30619 URN1YPR152C 1398 nt14.81□□□□□ -0.04
SEC1P30619 DEP1YAL013W 1218 nt14.78□□□□□ -0.04
SEC1P30619 PUT4YOR348C 1884 nt14.74□□□□□ -0.05
SEC1P30619 GAR1YHR089C 618 nt14.73□□□□□ -0.05
SEC1P30619 OPI9YLR338W 858 nt14.6□□□□□ -0.07
SEC1P30619 RPN10YHR200W 807 nt14.58□□□□□ -0.08
SEC1P30619 YNL208WYNL208W 600 nt14.56□□□□□ -0.08
SEC1P30619 SAH1YER043C 1350 nt14.51□□□□□ -0.09
SEC1P30619 ARE1YCR048W 1833 nt14.46□□□□□ -0.09
SEC1P30619 PST2YDR032C 597 nt14.41□□□□□ -0.1
SEC1P30619 YHR049C-AYHR049C-A 297 nt14.29□□□□□ -0.12
SEC1P30619 POA1YBR022W 534 nt14.27□□□□□ -0.13
SEC1P30619 SSA3YBL075C 1950 nt14.25□□□□□ -0.13
SEC1P30619 TIR1YER011W 765 nt14.23□□□□□ -0.13
SEC1P30619 PUN1YLR414C 792 nt14.19□□□□□ -0.14
SEC1P30619 YJR018WYJR018W 363 nt14.12□□□□□ -0.15
SEC1P30619 SSA1YAL005C 1929 nt14.07□□□□□ -0.16
SEC1P30619 PTC2YER089C 1395 nt14.01□□□□□ -0.17
SEC1P30619 BSC6YOL137W 1494 nt13.98□□□□□ -0.17
SEC1P30619 BUD23YCR047C 828 nt13.94□□□□□ -0.18
SEC1P30619 YJR120WYJR120W 351 nt13.9□□□□□ -0.18
SEC1P30619 SHU1YHL006C 453 nt13.84□□□□□ -0.19
SEC1P30619 NAB2YGL122C 1578 nt13.83□□□□□ -0.19
SEC1P30619 RPP2BYDR382W 333 nt13.83□□□□□ -0.2
SEC1P30619 SRB2YHR041C 633 nt13.83□□□□□ -0.2
SEC1P30619 YKL097CYKL097C 411 nt13.83□□□□□ -0.2
SEC1P30619 FIS1YIL065C 468 nt13.66□□□□□ -0.22
SEC1P30619 DAL1YIR027C 1383 nt13.65□□□□□ -0.22
SEC1P30619 YAL037C-BYAL037C-B 975 nt13.63□□□□□ -0.23
SEC1P30619 INM2YDR287W 879 nt13.61□□□□□ -0.23
SEC1P30619 FPR4YLR449W 1179 nt13.61□□□□□ -0.23
SEC1P30619 WWM1YFL010C 636 nt13.6□□□□□ -0.23
SEC1P30619 BDH2YAL061W 1254 nt13.55□□□□□ -0.24
SEC1P30619 PHO4YFR034C 939 nt13.53□□□□□ -0.24
SEC1P30619 YGR021WYGR021W 873 nt13.53□□□□□ -0.24
SEC1P30619 YBL100CYBL100C 315 nt13.5□□□□□ -0.25
SEC1P30619 HOM6YJR139C 1080 nt13.48□□□□□ -0.25
SEC1P30619 MNP1YGL068W 585 nt13.41□□□□□ -0.26
SEC1P30619 YFL021C-AYFL021C-A 855 nt13.39□□□□□ -0.27
SEC1P30619 LSM3YLR438C-A 270 nt13.35□□□□□ -0.27
SEC1P30619 FUN26YAL022C 1554 nt13.32□□□□□ -0.28
SEC1P30619 SPT5YML010W 3192 nt13.32□□□□□ -0.28
SEC1P30619 TRM9YML014W 840 nt13.28□□□□□ -0.28
SEC1P30619 YOR139CYOR139C 393 nt13.28□□□□□ -0.28
SEC1P30619 YPS1YLR120C 1710 nt13.27□□□□□ -0.28
SEC1P30619 RKM5YLR137W 1104 nt13.27□□□□□ -0.29
SEC1P30619 YDR095CYDR095C 411 nt13.19□□□□□ -0.3
SEC1P30619 NPL3YDR432W 1245 nt13.19□□□□□ -0.3
SEC1P30619 YOL037CYOL037C 354 nt13.18□□□□□ -0.3
SEC1P30619 CCT6YDR188W 1641 nt13.17□□□□□ -0.3
SEC1P30619 ALF1YNL148C 765 nt13.15□□□□□ -0.3
SEC1P30619 YHR165W-AYHR165W-A 312 nt13.13□□□□□ -0.31
SEC1P30619 MEP2YNL142W 1500 nt13.11□□□□□ -0.31
SEC1P30619 SUF2tP(AGG)C 72 nt13.06□□□□□ -0.32
SEC1P30619 SUF10tP(AGG)N 72 nt13.06□□□□□ -0.32
SEC1P30619 SIS1YNL007C 1059 nt12.95□□□□□ -0.34
SEC1P30619 RPP2AYOL039W 321 nt12.93□□□□□ -0.34
SEC1P30619 SSA4YER103W 1929 nt12.91□□□□□ -0.34
SEC1P30619 DCW1YKL046C 1350 nt12.91□□□□□ -0.34
SEC1P30619 PTP1YDL230W 1008 nt12.88□□□□□ -0.35
SEC1P30619 YLR281CYLR281C 468 nt12.85□□□□□ -0.35
SEC1P30619 YLR154C-GYLR154C-G 150 nt12.81□□□□□ -0.36
SEC1P30619 WHI5YOR083W 888 nt12.81□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms