RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA10YHR039C-A MTC1P47018 478 aaKnown RBP10.76□□□□□ -0.69
VMA10YHR039C-A DRS1P32892 752 aaKnown RBP10.59□□□□□ -0.71
VMA10YHR039C-A DIP2Q12220 943 aaPredicted RBP9.09□□□□□ -0.95
VMA10YHR039C-A FAP1P53971 965 aa9.07□□□□□ -0.96
VMA10YHR039C-A BFR2Q06631 534 aaKnown RBP9.06□□□□□ -0.96
VMA10YHR039C-A AVT3P36062 692 aa8.91□□□□□ -0.98
VMA10YHR039C-A ISW2Q08773 1120 aa8.79□□□□□ -1
VMA10YHR039C-A PRI1P10363 409 aa8.76□□□□□ -1.01
VMA10YHR039C-A RPG1P38249 964 aaKnown RBP8.69□□□□□ -1.02
VMA10YHR039C-A AAD16Q02895 342 aa8.63□□□□□ -1.03
VMA10YHR039C-A RSE1Q04693 1361 aaKnown RBP8.62□□□□□ -1.03
VMA10YHR039C-A PRY3P47033 881 aa8.49□□□□□ -1.05
VMA10YHR039C-A TFA1P36100 482 aa8.37□□□□□ -1.07
VMA10YHR039C-A RPL17AP05740 184 aaKnown RBP8.33□□□□□ -1.08
VMA10YHR039C-A RPL17BP46990 184 aaKnown RBP8.33□□□□□ -1.08
VMA10YHR039C-A TSR3Q12094 313 aaKnown RBP8.32□□□□□ -1.08
VMA10YHR039C-A REB1P21538 810 aa8.23□□□□□ -1.09
VMA10YHR039C-A YCK3P39962 524 aa8.06□□□□□ -1.12
VMA10YHR039C-A SPT21P35209 758 aa8□□□□□ -1.13
VMA10YHR039C-A HAA1Q12753 694 aaKnown RBP7.99□□□□□ -1.13
VMA10YHR039C-A MRPL32P25348 183 aa7.98□□□□□ -1.13
VMA10YHR039C-A RIM101P33400 625 aa7.86□□□□□ -1.15
VMA10YHR039C-A YKR023WP36119 530 aaKnown RBP7.8□□□□□ -1.16
VMA10YHR039C-A CDC27P38042 758 aa7.69□□□□□ -1.18
VMA10YHR039C-A HOP09932 586 aa7.64□□□□□ -1.19
VMA10YHR039C-A TFC8Q12308 588 aa7.64□□□□□ -1.19
VMA10YHR039C-A OXP1P28273 1286 aa7.61□□□□□ -1.19
VMA10YHR039C-A DCD1P06773 312 aa7.6□□□□□ -1.19
VMA10YHR039C-A YGL015CP33199 130 aa7.5□□□□□ -1.21
VMA10YHR039C-A YIL055CP40523 627 aaKnown RBP7.49□□□□□ -1.21
VMA10YHR039C-A YAH1Q12184 172 aaKnown RBP7.46□□□□□ -1.22
VMA10YHR039C-A PTP3P40048 928 aa7.45□□□□□ -1.22
VMA10YHR039C-A BCH2P36122 765 aa7.41□□□□□ -1.22
VMA10YHR039C-A SSP1P38871 571 aa7.41□□□□□ -1.22
VMA10YHR039C-A MAP2P38174 421 aaKnown RBP7.39□□□□□ -1.23
VMA10YHR039C-A RSM7P47150 247 aa7.38□□□□□ -1.23
VMA10YHR039C-A UBP10P53874 792 aaPredicted RBP7.38□□□□□ -1.23
VMA10YHR039C-A YLR271WQ06152 274 aa7.36□□□□□ -1.23
VMA10YHR039C-A SCY1P53009 804 aa7.33□□□□□ -1.24
VMA10YHR039C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
VMA10YHR039C-A AI2P03876 854 aa7.27□□□□□ -1.25
VMA10YHR039C-A EPS1P40557 701 aa7.26□□□□□ -1.25
VMA10YHR039C-A BDF1P35817 686 aa7.23□□□□□ -1.25
VMA10YHR039C-A BBC1P47068 1157 aa7.22□□□□□ -1.25
VMA10YHR039C-A SLX5P32828 619 aaKnown RBP7.2□□□□□ -1.26
VMA10YHR039C-A PSD2P53037 1138 aaKnown RBP7.18□□□□□ -1.26
VMA10YHR039C-A MGA2P40578 1113 aa7.16□□□□□ -1.26
VMA10YHR039C-A CST9Q06032 482 aa7.14□□□□□ -1.27
VMA10YHR039C-A TIF4632P39936 914 aaKnown RBP7.07□□□□□ -1.28
VMA10YHR039C-A TGL3P40308 642 aa7.04□□□□□ -1.28
VMA10YHR039C-A MRM1P25270 412 aa7.03□□□□□ -1.28
VMA10YHR039C-A RTG3P38165 486 aa6.93□□□□□ -1.3
VMA10YHR039C-A RCR1P38212 213 aa6.91□□□□□ -1.3
VMA10YHR039C-A RQC2Q12532 1038 aaKnown RBP6.89□□□□□ -1.31
VMA10YHR039C-A NSR1P27476 414 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
VMA10YHR039C-A VPS29P38759 282 aa6.88□□□□□ -1.31
VMA10YHR039C-A RAM2P29703 316 aa6.84□□□□□ -1.31
VMA10YHR039C-A YAP5P40574 245 aa6.84□□□□□ -1.31
VMA10YHR039C-A DMA1P38823 416 aa6.83□□□□□ -1.32
VMA10YHR039C-A YMR1P47147 688 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
VMA10YHR039C-A YOR238WQ08634 303 aa6.82□□□□□ -1.32
VMA10YHR039C-A MST1P07236 462 aa6.81□□□□□ -1.32
VMA10YHR039C-A DBP1P24784 617 aaKnown RBP6.79□□□□□ -1.32
VMA10YHR039C-A PIB1Q06651 286 aa6.78□□□□□ -1.32
VMA10YHR039C-A STS1P38637 319 aa6.77□□□□□ -1.33
VMA10YHR039C-A YFR006WP43590 535 aa6.77□□□□□ -1.33
VMA10YHR039C-A MAK11P20484 414 aaKnown RBP6.74□□□□□ -1.33
VMA10YHR039C-A GTT3P39996 337 aa6.68□□□□□ -1.34
VMA10YHR039C-A VMA1P17255 1071 aaKnown RBP6.66□□□□□ -1.34
VMA10YHR039C-A COQ8P27697 501 aa6.65□□□□□ -1.34
VMA10YHR039C-A MIF2P35201 549 aa6.65□□□□□ -1.34
VMA10YHR039C-A UBP9P39967 754 aa6.65□□□□□ -1.34
VMA10YHR039C-A SET1P38827 1080 aaKnown RBP6.64□□□□□ -1.35
VMA10YHR039C-A BUD31P25337 157 aaPredicted RBP6.63□□□□□ -1.35
VMA10YHR039C-A EDS1P38073 919 aa6.63□□□□□ -1.35
VMA10YHR039C-A WSC3Q12215 556 aa6.61□□□□□ -1.35
VMA10YHR039C-A YBL029C-AQ3E756 94 aa6.61□□□□□ -1.35
VMA10YHR039C-A SAM3Q08986 587 aa6.6□□□□□ -1.35
VMA10YHR039C-A PTC3P34221 468 aaKnown RBP6.58□□□□□ -1.36
VMA10YHR039C-A VNX1P42839 908 aa6.58□□□□□ -1.36
VMA10YHR039C-A YOL036WQ08206 761 aa6.57□□□□□ -1.36
VMA10YHR039C-A NOP53Q12080 455 aaKnown RBP6.57□□□□□ -1.36
VMA10YHR039C-A SET4P42948 560 aa6.55□□□□□ -1.36
VMA10YHR039C-A GYP5Q12344 894 aa6.54□□□□□ -1.36
VMA10YHR039C-A MSB4Q12317 492 aa6.53□□□□□ -1.36
VMA10YHR039C-A SAS10Q12136 610 aaPredicted RBP6.52□□□□□ -1.37
VMA10YHR039C-A SPP1Q03012 353 aa6.51□□□□□ -1.37
VMA10YHR039C-A GRE2Q12068 342 aaKnown RBP6.51□□□□□ -1.37
VMA10YHR039C-A TIF11P38912 153 aaKnown RBP6.5□□□□□ -1.37
VMA10YHR039C-A IFH1P39520 1085 aa6.5□□□□□ -1.37
VMA10YHR039C-A ATH1P48016 1211 aa6.5□□□□□ -1.37
VMA10YHR039C-A YPR148CQ06523 435 aa6.5□□□□□ -1.37
VMA10YHR039C-A GUT1P32190 709 aa6.49□□□□□ -1.37
VMA10YHR039C-A DCW1P36091 449 aa6.49□□□□□ -1.37
VMA10YHR039C-A ABP1P15891 592 aaKnown RBP6.47□□□□□ -1.37
VMA10YHR039C-A EAP1P36041 632 aaKnown RBP6.47□□□□□ -1.37
VMA10YHR039C-A ULI1P43604 169 aa6.47□□□□□ -1.37
VMA10YHR039C-A VPS70P47161 811 aa6.46□□□□□ -1.38
VMA10YHR039C-A TRP5P00931 707 aaKnown RBP6.45□□□□□ -1.38
VMA10YHR039C-A HTA1P04911 132 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms