RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W DUS3Q06053 668 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W YLR125WQ12138 136 aa1.78□□□□□ -2.12
RTP1YMR185W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
RTP1YMR185W ENA5Q12691 1091 aa1.78□□□□□ -2.12
RTP1YMR185W CHS1P08004 1131 aa1.77□□□□□ -2.13
RTP1YMR185W HMG1P12683 1054 aa1.77□□□□□ -2.13
RTP1YMR185W RSR1P13856 272 aa1.77□□□□□ -2.13
RTP1YMR185W MSM1P22438 575 aa1.77□□□□□ -2.13
RTP1YMR185W VPS34P22543 875 aa1.77□□□□□ -2.13
RTP1YMR185W TRX2P22803 104 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W URE2P23202 354 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W GIT1P25346 518 aa1.77□□□□□ -2.13
RTP1YMR185W PUP3P25451 205 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W YCR016WP25617 290 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W NUP2P32499 720 aa1.77□□□□□ -2.13
RTP1YMR185W RGT1P32862 1170 aa1.77□□□□□ -2.13
RTP1YMR185W RPS1AP33442 255 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W PEX6P33760 1030 aa1.77□□□□□ -2.13
RTP1YMR185W HCS1P34243 683 aa1.77□□□□□ -2.13
RTP1YMR185W BIT2P38346 545 aa1.77□□□□□ -2.13
RTP1YMR185W FAD1P38913 306 aa1.77□□□□□ -2.13
RTP1YMR185W PRM9P39551 298 aa1.77□□□□□ -2.13
RTP1YMR185W YEL020CP39994 560 aa1.77□□□□□ -2.13
RTP1YMR185W YGR117CP53270 476 aa1.77□□□□□ -2.13
RTP1YMR185W LSM3P57743 89 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W SMA1Q02651 245 aa1.77□□□□□ -2.13
RTP1YMR185W YMR099CQ03161 297 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W RLI1Q03195 608 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W SNU56Q03782 492 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W YAP6Q03935 383 aa1.77□□□□□ -2.13
RTP1YMR185W ECM11Q04110 302 aa1.77□□□□□ -2.13
RTP1YMR185W PEX10Q05568 337 aa1.77□□□□□ -2.13
RTP1YMR185W ECM38Q05902 660 aaPredicted RBP1.77□□□□□ -2.13
RTP1YMR185W DNL4Q08387 944 aaPredicted RBP1.77□□□□□ -2.13
RTP1YMR185W GPM2Q12008 311 aa1.77□□□□□ -2.13
RTP1YMR185W ULA1Q12059 462 aa1.77□□□□□ -2.13
RTP1YMR185W BBP1Q12365 385 aa1.77□□□□□ -2.13
RTP1YMR185W AHA1Q12449 350 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W RPN13O13563 156 aa1.77□□□□□ -2.13
RTP1YMR185W PHO4P07270 312 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W COS2P0CX12 379 aa1.77□□□□□ -2.13
RTP1YMR185W COS3P0CX13 379 aa1.77□□□□□ -2.13
RTP1YMR185W HSP26P15992 214 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
RTP1YMR185W NCP1P16603 691 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W GLN3P18494 730 aa1.77□□□□□ -2.13
RTP1YMR185W CCA1P21269 546 aa1.77□□□□□ -2.13
RTP1YMR185W CHA1P25379 360 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W EMC1P25574 760 aa1.77□□□□□ -2.13
RTP1YMR185W YCL068CP25593 260 aa1.77□□□□□ -2.13
RTP1YMR185W SPT14P32363 452 aa1.77□□□□□ -2.13
RTP1YMR185W SAC1P32368 623 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W UTR4P32626 227 aa1.77□□□□□ -2.13
RTP1YMR185W HBS1P32769 611 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W STB6P36085 766 aa1.77□□□□□ -2.13
RTP1YMR185W VID24P38263 362 aa1.77□□□□□ -2.13
RTP1YMR185W TDP1P38319 544 aa1.77□□□□□ -2.13
RTP1YMR185W MUP3P38734 546 aa1.77□□□□□ -2.13
RTP1YMR185W YAP1801P38856 637 aa1.77□□□□□ -2.13
RTP1YMR185W AVT2P39981 480 aa1.77□□□□□ -2.13
RTP1YMR185W VAB2P40003 282 aa1.77□□□□□ -2.13
RTP1YMR185W ISC1P40015 477 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W MEP1P40260 492 aa1.77□□□□□ -2.13
RTP1YMR185W AYR1P40471 297 aa1.77□□□□□ -2.13
RTP1YMR185W PAC11P40960 533 aa1.77□□□□□ -2.13
RTP1YMR185W MRPS18P42847 217 aa1.77□□□□□ -2.13
RTP1YMR185W SNX4P47057 423 aa1.77□□□□□ -2.13
RTP1YMR185W GCV2P49095 1034 aa1.77□□□□□ -2.13
RTP1YMR185W MNN10P50108 393 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W ATP22P50273 684 aaPredicted RBP1.77□□□□□ -2.13
RTP1YMR185W YPT32P51996 222 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W AIF1P52923 378 aa1.77□□□□□ -2.13
RTP1YMR185W GND2P53319 492 aa1.77□□□□□ -2.13
RTP1YMR185W SNF12P53628 566 aa1.77□□□□□ -2.13
RTP1YMR185W IGO1P53897 168 aa1.77□□□□□ -2.13
RTP1YMR185W IMP4P53941 290 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W MUK1Q02866 612 aa1.77□□□□□ -2.13
RTP1YMR185W YML131WQ03102 365 aa1.77□□□□□ -2.13
RTP1YMR185W ENT5Q03769 411 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W HPT1Q04178 221 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W RAD33Q04231 177 aa1.77□□□□□ -2.13
RTP1YMR185W TRM12Q04235 462 aa1.77□□□□□ -2.13
RTP1YMR185W BLS1Q06071 122 aa1.77□□□□□ -2.13
RTP1YMR185W YPS7Q06325 596 aa1.77□□□□□ -2.13
RTP1YMR185W GPI11Q06636 219 aa1.77□□□□□ -2.13
RTP1YMR185W GRS2Q06817 618 aa1.77□□□□□ -2.13
RTP1YMR185W MDM36Q06820 579 aa1.77□□□□□ -2.13
RTP1YMR185W SHS1Q07657 551 aa1.77□□□□□ -2.13
RTP1YMR185W FLC1Q08967 793 aa1.77□□□□□ -2.13
RTP1YMR185W PUS9Q12069 462 aa1.77□□□□□ -2.13
RTP1YMR185W BAG7Q12128 409 aa1.77□□□□□ -2.13
RTP1YMR185W HSP42Q12329 375 aa1.77□□□□□ -2.13
RTP1YMR185W DBP10Q12389 995 aaKnown RBP1.77□□□□□ -2.13
RTP1YMR185W YPR1Q12458 312 aa1.77□□□□□ -2.13
RTP1YMR185W PFK27Q12471 397 aaPredicted RBP1.77□□□□□ -2.13
RTP1YMR185W RMD5Q12508 421 aa1.77□□□□□ -2.13
RTP1YMR185W MHF1Q3E835 90 aa1.77□□□□□ -2.13
RTP1YMR185W COX4P04037 155 aa1.77□□□□□ -2.13
RTP1YMR185W HEM2P05373 342 aa1.77□□□□□ -2.13
RTP1YMR185W MET17P06106 444 aa1.77□□□□□ -2.13
RTP1YMR185W MSS116P15424 664 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms