RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W MTC1P47018 478 aaKnown RBP5.51□□□□□ -1.53
RTP1YMR185W FAP1P53971 965 aa5.27□□□□□ -1.57
RTP1YMR185W DRS1P32892 752 aaKnown RBP5.09□□□□□ -1.59
RTP1YMR185W PRY3P47033 881 aa4.93□□□□□ -1.62
RTP1YMR185W AAD16Q02895 342 aa4.74□□□□□ -1.65
RTP1YMR185W PRI1P10363 409 aa4.69□□□□□ -1.66
RTP1YMR185W ISW2Q08773 1120 aa4.66□□□□□ -1.66
RTP1YMR185W RPG1P38249 964 aaKnown RBP4.6□□□□□ -1.67
RTP1YMR185W HAA1Q12753 694 aaKnown RBP4.55□□□□□ -1.68
RTP1YMR185W TSR3Q12094 313 aaKnown RBP4.51□□□□□ -1.69
RTP1YMR185W DIP2Q12220 943 aaPredicted RBP4.46□□□□□ -1.69
RTP1YMR185W YCK3P39962 524 aa4.43□□□□□ -1.7
RTP1YMR185W RSE1Q04693 1361 aaKnown RBP4.38□□□□□ -1.71
RTP1YMR185W MRPL32P25348 183 aa4.36□□□□□ -1.71
RTP1YMR185W REB1P21538 810 aa4.31□□□□□ -1.72
RTP1YMR185W RPL17AP05740 184 aaKnown RBP4.28□□□□□ -1.72
RTP1YMR185W RPL17BP46990 184 aaKnown RBP4.28□□□□□ -1.72
RTP1YMR185W BFR2Q06631 534 aaKnown RBP4.19□□□□□ -1.74
RTP1YMR185W AVT3P36062 692 aa4.17□□□□□ -1.74
RTP1YMR185W YGL015CP33199 130 aa4.16□□□□□ -1.74
RTP1YMR185W CDC27P38042 758 aa4.03□□□□□ -1.76
RTP1YMR185W BUD31P25337 157 aaPredicted RBP4□□□□□ -1.77
RTP1YMR185W HOP09932 586 aa3.96□□□□□ -1.78
RTP1YMR185W MAP2P38174 421 aaKnown RBP3.95□□□□□ -1.78
RTP1YMR185W YKR023WP36119 530 aaKnown RBP3.95□□□□□ -1.78
RTP1YMR185W DCD1P06773 312 aa3.94□□□□□ -1.78
RTP1YMR185W SPT21P35209 758 aa3.94□□□□□ -1.78
RTP1YMR185W UBP10P53874 792 aaPredicted RBP3.94□□□□□ -1.78
RTP1YMR185W TFC8Q12308 588 aa3.89□□□□□ -1.79
RTP1YMR185W SCY1P53009 804 aa3.89□□□□□ -1.79
RTP1YMR185W SLX5P32828 619 aaKnown RBP3.84□□□□□ -1.79
RTP1YMR185W TIF4632P39936 914 aaKnown RBP3.84□□□□□ -1.79
RTP1YMR185W RIM101P33400 625 aa3.78□□□□□ -1.8
RTP1YMR185W BCH2P36122 765 aa3.76□□□□□ -1.81
RTP1YMR185W UBP9P39967 754 aa3.76□□□□□ -1.81
RTP1YMR185W SIS1P25294 352 aaKnown RBP3.76□□□□□ -1.81
RTP1YMR185W PTP3P40048 928 aa3.76□□□□□ -1.81
RTP1YMR185W YIL055CP40523 627 aaKnown RBP3.75□□□□□ -1.81
RTP1YMR185W TGL3P40308 642 aa3.73□□□□□ -1.81
RTP1YMR185W YAH1Q12184 172 aaKnown RBP3.69□□□□□ -1.82
RTP1YMR185W EPS1P40557 701 aa3.69□□□□□ -1.82
RTP1YMR185W OXP1P28273 1286 aa3.66□□□□□ -1.82
RTP1YMR185W BDF1P35817 686 aa3.65□□□□□ -1.82
RTP1YMR185W BBC1P47068 1157 aa3.65□□□□□ -1.82
RTP1YMR185W RSM7P47150 247 aa3.61□□□□□ -1.83
RTP1YMR185W YOR238WQ08634 303 aa3.61□□□□□ -1.83
RTP1YMR185W AI2P03876 854 aa3.59□□□□□ -1.83
RTP1YMR185W YBL029C-AQ3E756 94 aa3.59□□□□□ -1.83
RTP1YMR185W GTT3P39996 337 aa3.59□□□□□ -1.84
RTP1YMR185W WSC3Q12215 556 aa3.59□□□□□ -1.84
RTP1YMR185W TFA1P36100 482 aa3.56□□□□□ -1.84
RTP1YMR185W YAP5P40574 245 aa3.56□□□□□ -1.84
RTP1YMR185W SPP1Q03012 353 aa3.54□□□□□ -1.84
RTP1YMR185W PIB1Q06651 286 aa3.53□□□□□ -1.84
RTP1YMR185W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
RTP1YMR185W VNX1P42839 908 aa3.5□□□□□ -1.85
RTP1YMR185W YJL171CP46992 396 aa3.49□□□□□ -1.85
RTP1YMR185W MST1P07236 462 aa3.49□□□□□ -1.85
RTP1YMR185W YLR271WQ06152 274 aa3.49□□□□□ -1.85
RTP1YMR185W MRM1P25270 412 aa3.48□□□□□ -1.85
RTP1YMR185W NSR1P27476 414 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
RTP1YMR185W TIF11P38912 153 aaKnown RBP3.46□□□□□ -1.86
RTP1YMR185W SSP1P38871 571 aa3.45□□□□□ -1.86
RTP1YMR185W ULI1P43604 169 aa3.43□□□□□ -1.86
RTP1YMR185W PSD2P53037 1138 aaKnown RBP3.43□□□□□ -1.86
RTP1YMR185W LDB19Q12502 818 aa3.42□□□□□ -1.86
RTP1YMR185W SET4P42948 560 aa3.41□□□□□ -1.86
RTP1YMR185W YFR006WP43590 535 aa3.4□□□□□ -1.86
RTP1YMR185W FKH1P40466 484 aa3.4□□□□□ -1.87
RTP1YMR185W DBP1P24784 617 aaKnown RBP3.38□□□□□ -1.87
RTP1YMR185W BMT6Q12291 365 aa3.38□□□□□ -1.87
RTP1YMR185W AIR2Q12476 344 aaKnown RBP3.38□□□□□ -1.87
RTP1YMR185W YMR1P47147 688 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
RTP1YMR185W CST9Q06032 482 aa3.37□□□□□ -1.87
RTP1YMR185W EAP1P36041 632 aaKnown RBP3.37□□□□□ -1.87
RTP1YMR185W YOL036WQ08206 761 aa3.37□□□□□ -1.87
RTP1YMR185W RTG3P38165 486 aa3.37□□□□□ -1.87
RTP1YMR185W MGA2P40578 1113 aa3.37□□□□□ -1.87
RTP1YMR185W MSB4Q12317 492 aa3.36□□□□□ -1.87
RTP1YMR185W TFG1P41895 735 aaPredicted RBP3.36□□□□□ -1.87
RTP1YMR185W RTG1P32607 177 aa3.35□□□□□ -1.87
RTP1YMR185W TRP5P00931 707 aaKnown RBP3.33□□□□□ -1.88
RTP1YMR185W VMA1P17255 1071 aaKnown RBP3.33□□□□□ -1.88
RTP1YMR185W IOC2Q12072 812 aa3.33□□□□□ -1.88
RTP1YMR185W NCR1Q12200 1170 aa3.32□□□□□ -1.88
RTP1YMR185W STS1P38637 319 aa3.32□□□□□ -1.88
RTP1YMR185W VPS29P38759 282 aa3.32□□□□□ -1.88
RTP1YMR185W YNL035CP53962 389 aaKnown RBP3.31□□□□□ -1.88
RTP1YMR185W DCW1P36091 449 aa3.3□□□□□ -1.88
RTP1YMR185W RCR1P38212 213 aa3.3□□□□□ -1.88
RTP1YMR185W GYP5Q12344 894 aa3.3□□□□□ -1.88
RTP1YMR185W SAP30P38429 201 aa3.28□□□□□ -1.88
RTP1YMR185W HTA1P04911 132 aaKnown RBP3.27□□□□□ -1.89
RTP1YMR185W HTA2P04912 132 aa3.27□□□□□ -1.89
RTP1YMR185W SEC61P32915 480 aa3.27□□□□□ -1.89
RTP1YMR185W MIF2P35201 549 aa3.26□□□□□ -1.89
RTP1YMR185W SAM3Q08986 587 aa3.26□□□□□ -1.89
RTP1YMR185W ABP1P15891 592 aaKnown RBP3.25□□□□□ -1.89
RTP1YMR185W JIP4Q03361 876 aa3.24□□□□□ -1.89
RTP1YMR185W YDL129WQ07555 291 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms