Protein–RNA interactions for Protein: P08004

CHS1, Chitin synthase 1, yeastyeast

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHS1P08004 YML009W-BYML009W-B 477 nt21.83■■□□□ 1.09
CHS1P08004 NSR1YGR159C 1245 nt21.54■■□□□ 1.04
CHS1P08004 NOP1YDL014W 984 nt21.22■□□□□ 0.99
CHS1P08004 YKL036CYKL036C 393 nt19.71■□□□□ 0.75
CHS1P08004 MDJ1YFL016C 1536 nt19.07■□□□□ 0.64
CHS1P08004 Q0297Q0297 156 nt18.62■□□□□ 0.57
CHS1P08004 SRX1YKL086W 384 nt18.55■□□□□ 0.56
CHS1P08004 YJL027CYJL027C 417 nt18.45■□□□□ 0.54
CHS1P08004 SCS3YGL126W 1143 nt18.03■□□□□ 0.48
CHS1P08004 YCR051WYCR051W 669 nt17.65■□□□□ 0.42
CHS1P08004 YOL085CYOL085C 342 nt17.1■□□□□ 0.33
CHS1P08004 DBP2YNL112W 1641 nt16.92■□□□□ 0.3
CHS1P08004 PKP1YIL042C 1185 nt16.86■□□□□ 0.29
CHS1P08004 RPP1BYDL130W 321 nt16.72■□□□□ 0.27
CHS1P08004 TRN1tP(UGG)A 72 nt16.71■□□□□ 0.27
CHS1P08004 SUF9tP(UGG)F 72 nt16.71■□□□□ 0.27
CHS1P08004 SUF8tP(UGG)H 72 nt16.71■□□□□ 0.27
CHS1P08004 tP(UGG)LtP(UGG)L 72 nt16.71■□□□□ 0.27
CHS1P08004 SUF7tP(UGG)M 72 nt16.71■□□□□ 0.27
CHS1P08004 tP(UGG)N1tP(UGG)N1 72 nt16.71■□□□□ 0.27
CHS1P08004 tP(UGG)N2tP(UGG)N2 72 nt16.71■□□□□ 0.27
CHS1P08004 tP(UGG)O1tP(UGG)O1 72 nt16.71■□□□□ 0.27
CHS1P08004 SUF11tP(UGG)O2 72 nt16.71■□□□□ 0.27
CHS1P08004 CCC1YLR220W 969 nt16.6■□□□□ 0.25
CHS1P08004 YBR190WYBR190W 312 nt16.18■□□□□ 0.18
CHS1P08004 ATS1YAL020C 1002 nt16.16■□□□□ 0.18
CHS1P08004 SCJ1YMR214W 1134 nt16.05■□□□□ 0.16
CHS1P08004 PET122YER153C 765 nt15.99■□□□□ 0.15
CHS1P08004 RVS167YDR388W 1449 nt15.89■□□□□ 0.13
CHS1P08004 tP(UGG)O3tP(UGG)O3 72 nt15.87■□□□□ 0.13
CHS1P08004 RTC3YHR087W 336 nt15.87■□□□□ 0.13
CHS1P08004 SCR1SCR1 522 nt15.81■□□□□ 0.12
CHS1P08004 RRN5YLR141W 1092 nt15.55■□□□□ 0.08
CHS1P08004 SHR5YOL110W 714 nt15.37■□□□□ 0.05
CHS1P08004 YDJ1YNL064C 1230 nt15.31■□□□□ 0.04
CHS1P08004 RSB1YOR049C 1065 nt15.26■□□□□ 0.03
CHS1P08004 YER088W-BYER088W-B 147 nt15.24■□□□□ 0.03
CHS1P08004 GAR1YHR089C 618 nt15.01□□□□□ -0.01
CHS1P08004 DEP1YAL013W 1218 nt14.96□□□□□ -0.01
CHS1P08004 PST2YDR032C 597 nt14.94□□□□□ -0.02
CHS1P08004 URN1YPR152C 1398 nt14.89□□□□□ -0.03
CHS1P08004 YNL208WYNL208W 600 nt14.68□□□□□ -0.06
CHS1P08004 RPN10YHR200W 807 nt14.65□□□□□ -0.06
CHS1P08004 OPI9YLR338W 858 nt14.63□□□□□ -0.07
CHS1P08004 PUT4YOR348C 1884 nt14.63□□□□□ -0.07
CHS1P08004 SAH1YER043C 1350 nt14.54□□□□□ -0.08
CHS1P08004 TIR1YER011W 765 nt14.48□□□□□ -0.09
CHS1P08004 ARE1YCR048W 1833 nt14.41□□□□□ -0.1
CHS1P08004 YKL097CYKL097C 411 nt14.4□□□□□ -0.1
CHS1P08004 SHU1YHL006C 453 nt14.32□□□□□ -0.12
CHS1P08004 SSA1YAL005C 1929 nt14.31□□□□□ -0.12
CHS1P08004 YHR049C-AYHR049C-A 297 nt14.22□□□□□ -0.13
CHS1P08004 YJR018WYJR018W 363 nt14.21□□□□□ -0.13
CHS1P08004 POA1YBR022W 534 nt14.21□□□□□ -0.13
CHS1P08004 PUN1YLR414C 792 nt14.19□□□□□ -0.14
CHS1P08004 SRB2YHR041C 633 nt14.13□□□□□ -0.15
CHS1P08004 YAL037C-BYAL037C-B 975 nt14.1□□□□□ -0.15
CHS1P08004 YJR120WYJR120W 351 nt14.04□□□□□ -0.16
CHS1P08004 PTC2YER089C 1395 nt14.04□□□□□ -0.16
CHS1P08004 RPP2BYDR382W 333 nt13.93□□□□□ -0.18
CHS1P08004 BUD23YCR047C 828 nt13.92□□□□□ -0.18
CHS1P08004 WWM1YFL010C 636 nt13.89□□□□□ -0.19
CHS1P08004 BSC6YOL137W 1494 nt13.85□□□□□ -0.19
CHS1P08004 YOR139CYOR139C 393 nt13.83□□□□□ -0.2
CHS1P08004 NAB2YGL122C 1578 nt13.81□□□□□ -0.2
CHS1P08004 YGR021WYGR021W 873 nt13.78□□□□□ -0.2
CHS1P08004 HOM6YJR139C 1080 nt13.78□□□□□ -0.2
CHS1P08004 MNP1YGL068W 585 nt13.76□□□□□ -0.21
CHS1P08004 SSA3YBL075C 1950 nt13.72□□□□□ -0.21
CHS1P08004 BDH2YAL061W 1254 nt13.68□□□□□ -0.22
CHS1P08004 FPR4YLR449W 1179 nt13.67□□□□□ -0.22
CHS1P08004 INM2YDR287W 879 nt13.66□□□□□ -0.22
CHS1P08004 NPL3YDR432W 1245 nt13.66□□□□□ -0.22
CHS1P08004 DAL1YIR027C 1383 nt13.66□□□□□ -0.22
CHS1P08004 FIS1YIL065C 468 nt13.64□□□□□ -0.23
CHS1P08004 YFL021C-AYFL021C-A 855 nt13.61□□□□□ -0.23
CHS1P08004 RKM5YLR137W 1104 nt13.57□□□□□ -0.24
CHS1P08004 YBL100CYBL100C 315 nt13.57□□□□□ -0.24
CHS1P08004 PHO4YFR034C 939 nt13.54□□□□□ -0.24
CHS1P08004 LSM3YLR438C-A 270 nt13.52□□□□□ -0.25
CHS1P08004 YOL037CYOL037C 354 nt13.51□□□□□ -0.25
CHS1P08004 FUN26YAL022C 1554 nt13.43□□□□□ -0.26
CHS1P08004 TRM9YML014W 840 nt13.41□□□□□ -0.26
CHS1P08004 tM(CAU)CtM(CAU)C 72 nt13.29□□□□□ -0.28
CHS1P08004 IMT4tM(CAU)E 72 nt13.29□□□□□ -0.28
CHS1P08004 IMT3tM(CAU)J3 72 nt13.29□□□□□ -0.28
CHS1P08004 IMT1tM(CAU)O1 72 nt13.29□□□□□ -0.28
CHS1P08004 IMT2tM(CAU)P 72 nt13.29□□□□□ -0.28
CHS1P08004 CCT6YDR188W 1641 nt13.26□□□□□ -0.29
CHS1P08004 YLR281CYLR281C 468 nt13.23□□□□□ -0.29
CHS1P08004 YPS1YLR120C 1710 nt13.22□□□□□ -0.29
CHS1P08004 ALF1YNL148C 765 nt13.19□□□□□ -0.3
CHS1P08004 WHI5YOR083W 888 nt13.18□□□□□ -0.3
CHS1P08004 PUS2YGL063W 1113 nt13.16□□□□□ -0.3
CHS1P08004 YDR095CYDR095C 411 nt13.15□□□□□ -0.3
CHS1P08004 SUF2tP(AGG)C 72 nt13.11□□□□□ -0.31
CHS1P08004 SUF10tP(AGG)N 72 nt13.11□□□□□ -0.31
CHS1P08004 SPT5YML010W 3192 nt13.1□□□□□ -0.31
CHS1P08004 YHR165W-AYHR165W-A 312 nt13.08□□□□□ -0.32
CHS1P08004 YLR154C-GYLR154C-G 150 nt13.05□□□□□ -0.32
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms