Protein–RNA interactions for Protein: P33442

RPS1A, 40S ribosomal protein S1-A, yeastyeast

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS1AP33442 NSR1YGR159C 1245 nt19.88■□□□□ 0.77
RPS1AP33442 YML009W-BYML009W-B 477 nt19.88■□□□□ 0.77
RPS1AP33442 NOP1YDL014W 984 nt19.25■□□□□ 0.67
RPS1AP33442 MDJ1YFL016C 1536 nt17.84■□□□□ 0.45
RPS1AP33442 YKL036CYKL036C 393 nt17.58■□□□□ 0.4
RPS1AP33442 SRX1YKL086W 384 nt16.79■□□□□ 0.28
RPS1AP33442 Q0297Q0297 156 nt16.75■□□□□ 0.27
RPS1AP33442 YJL027CYJL027C 417 nt16.47■□□□□ 0.23
RPS1AP33442 YCR051WYCR051W 669 nt15.97■□□□□ 0.15
RPS1AP33442 SCS3YGL126W 1143 nt15.89■□□□□ 0.13
RPS1AP33442 DBP2YNL112W 1641 nt15.66■□□□□ 0.1
RPS1AP33442 TRN1tP(UGG)A 72 nt15.28■□□□□ 0.04
RPS1AP33442 SUF9tP(UGG)F 72 nt15.28■□□□□ 0.04
RPS1AP33442 SUF8tP(UGG)H 72 nt15.28■□□□□ 0.04
RPS1AP33442 tP(UGG)LtP(UGG)L 72 nt15.28■□□□□ 0.04
RPS1AP33442 SUF7tP(UGG)M 72 nt15.28■□□□□ 0.04
RPS1AP33442 tP(UGG)N1tP(UGG)N1 72 nt15.28■□□□□ 0.04
RPS1AP33442 tP(UGG)N2tP(UGG)N2 72 nt15.28■□□□□ 0.04
RPS1AP33442 tP(UGG)O1tP(UGG)O1 72 nt15.28■□□□□ 0.04
RPS1AP33442 SUF11tP(UGG)O2 72 nt15.28■□□□□ 0.04
RPS1AP33442 YBR190WYBR190W 312 nt15.24■□□□□ 0.03
RPS1AP33442 YOL085CYOL085C 342 nt15.22■□□□□ 0.03
RPS1AP33442 CCC1YLR220W 969 nt15.19■□□□□ 0.02
RPS1AP33442 RPP1BYDL130W 321 nt15.05■□□□□ -0
RPS1AP33442 PKP1YIL042C 1185 nt15.05■□□□□ -0
RPS1AP33442 RTC3YHR087W 336 nt14.96□□□□□ -0.01
RPS1AP33442 RVS167YDR388W 1449 nt14.75□□□□□ -0.05
RPS1AP33442 SCJ1YMR214W 1134 nt14.59□□□□□ -0.07
RPS1AP33442 tP(UGG)O3tP(UGG)O3 72 nt14.41□□□□□ -0.1
RPS1AP33442 PET122YER153C 765 nt14.4□□□□□ -0.1
RPS1AP33442 SCR1SCR1 522 nt14.23□□□□□ -0.13
RPS1AP33442 ATS1YAL020C 1002 nt14.17□□□□□ -0.14
RPS1AP33442 SHR5YOL110W 714 nt14.17□□□□□ -0.14
RPS1AP33442 RRN5YLR141W 1092 nt13.97□□□□□ -0.17
RPS1AP33442 PUT4YOR348C 1884 nt13.95□□□□□ -0.18
RPS1AP33442 YDJ1YNL064C 1230 nt13.93□□□□□ -0.18
RPS1AP33442 URN1YPR152C 1398 nt13.9□□□□□ -0.18
RPS1AP33442 DEP1YAL013W 1218 nt13.87□□□□□ -0.19
RPS1AP33442 SSA3YBL075C 1950 nt13.8□□□□□ -0.2
RPS1AP33442 OPI9YLR338W 858 nt13.72□□□□□ -0.21
RPS1AP33442 YER088W-BYER088W-B 147 nt13.69□□□□□ -0.22
RPS1AP33442 GAR1YHR089C 618 nt13.69□□□□□ -0.22
RPS1AP33442 SAH1YER043C 1350 nt13.69□□□□□ -0.22
RPS1AP33442 RPN10YHR200W 807 nt13.67□□□□□ -0.22
RPS1AP33442 RSB1YOR049C 1065 nt13.66□□□□□ -0.22
RPS1AP33442 ARE1YCR048W 1833 nt13.65□□□□□ -0.22
RPS1AP33442 YNL208WYNL208W 600 nt13.6□□□□□ -0.23
RPS1AP33442 POA1YBR022W 534 nt13.54□□□□□ -0.24
RPS1AP33442 YHR049C-AYHR049C-A 297 nt13.51□□□□□ -0.25
RPS1AP33442 PUN1YLR414C 792 nt13.33□□□□□ -0.28
RPS1AP33442 BSC6YOL137W 1494 nt13.27□□□□□ -0.29
RPS1AP33442 YJR018WYJR018W 363 nt13.25□□□□□ -0.29
RPS1AP33442 BUD23YCR047C 828 nt13.22□□□□□ -0.29
RPS1AP33442 TIR1YER011W 765 nt13.22□□□□□ -0.29
RPS1AP33442 PTC2YER089C 1395 nt13.2□□□□□ -0.3
RPS1AP33442 PST2YDR032C 597 nt13.13□□□□□ -0.31
RPS1AP33442 SSA1YAL005C 1929 nt13.08□□□□□ -0.32
RPS1AP33442 NAB2YGL122C 1578 nt13.04□□□□□ -0.32
RPS1AP33442 RPP2BYDR382W 333 nt12.95□□□□□ -0.34
RPS1AP33442 YJR120WYJR120W 351 nt12.95□□□□□ -0.34
RPS1AP33442 FPR4YLR449W 1179 nt12.86□□□□□ -0.35
RPS1AP33442 DAL1YIR027C 1383 nt12.84□□□□□ -0.35
RPS1AP33442 SRB2YHR041C 633 nt12.81□□□□□ -0.36
RPS1AP33442 FIS1YIL065C 468 nt12.81□□□□□ -0.36
RPS1AP33442 INM2YDR287W 879 nt12.8□□□□□ -0.36
RPS1AP33442 PHO4YFR034C 939 nt12.72□□□□□ -0.37
RPS1AP33442 SPT5YML010W 3192 nt12.67□□□□□ -0.38
RPS1AP33442 SHU1YHL006C 453 nt12.65□□□□□ -0.38
RPS1AP33442 YBL100CYBL100C 315 nt12.65□□□□□ -0.38
RPS1AP33442 BDH2YAL061W 1254 nt12.63□□□□□ -0.39
RPS1AP33442 WWM1YFL010C 636 nt12.61□□□□□ -0.39
RPS1AP33442 YAL037C-BYAL037C-B 975 nt12.55□□□□□ -0.4
RPS1AP33442 YKL097CYKL097C 411 nt12.55□□□□□ -0.4
RPS1AP33442 YPS1YLR120C 1710 nt12.51□□□□□ -0.41
RPS1AP33442 FUN26YAL022C 1554 nt12.49□□□□□ -0.41
RPS1AP33442 YGR021WYGR021W 873 nt12.48□□□□□ -0.41
RPS1AP33442 MEP2YNL142W 1500 nt12.46□□□□□ -0.42
RPS1AP33442 TRM9YML014W 840 nt12.45□□□□□ -0.42
RPS1AP33442 YHR165W-AYHR165W-A 312 nt12.44□□□□□ -0.42
RPS1AP33442 LSM3YLR438C-A 270 nt12.43□□□□□ -0.42
RPS1AP33442 YDR095CYDR095C 411 nt12.41□□□□□ -0.42
RPS1AP33442 HOM6YJR139C 1080 nt12.41□□□□□ -0.42
RPS1AP33442 YFL021C-AYFL021C-A 855 nt12.4□□□□□ -0.42
RPS1AP33442 ALF1YNL148C 765 nt12.38□□□□□ -0.43
RPS1AP33442 SSA4YER103W 1929 nt12.35□□□□□ -0.43
RPS1AP33442 MNP1YGL068W 585 nt12.34□□□□□ -0.43
RPS1AP33442 CCT6YDR188W 1641 nt12.29□□□□□ -0.44
RPS1AP33442 DCW1YKL046C 1350 nt12.28□□□□□ -0.44
RPS1AP33442 SUF2tP(AGG)C 72 nt12.24□□□□□ -0.45
RPS1AP33442 SUF10tP(AGG)N 72 nt12.24□□□□□ -0.45
RPS1AP33442 RKM5YLR137W 1104 nt12.24□□□□□ -0.45
RPS1AP33442 RPP2AYOL039W 321 nt12.2□□□□□ -0.46
RPS1AP33442 SIS1YNL007C 1059 nt12.14□□□□□ -0.47
RPS1AP33442 PTP1YDL230W 1008 nt12.13□□□□□ -0.47
RPS1AP33442 EMI2YDR516C 1503 nt12.11□□□□□ -0.47
RPS1AP33442 YMR090WYMR090W 684 nt12.08□□□□□ -0.48
RPS1AP33442 CAC2YML102W 1407 nt12.08□□□□□ -0.48
RPS1AP33442 YOL037CYOL037C 354 nt12.05□□□□□ -0.48
RPS1AP33442 YOR139CYOR139C 393 nt12.05□□□□□ -0.48
RPS1AP33442 NPL3YDR432W 1245 nt12.04□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms