RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YOL087C	Q99247	1116 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	VCX1	Q99385	411 aa		3.78	□□□□□ -1.8
TPM1	YNL079C	HKR1	P41809	1802 aa		3.77	□□□□□ -1.81
TPM1	YNL079C	RPL22A	P05749	121 aa	Known RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	RPB2	P08518	1224 aa	Known RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	YMR085W	P0CF18	432 aa		3.77	□□□□□ -1.81
TPM1	YNL079C	ICL1	P28240	557 aa	Predicted RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	MCM4	P30665	933 aa	Known RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	PRO3	P32263	286 aa	Known RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	TFC3	P34111	1160 aa		3.77	□□□□□ -1.81
TPM1	YNL079C	EBP2	P36049	427 aa	Known RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	PFK26	P40433	827 aa	Known RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	PCI8	P40512	444 aa		3.77	□□□□□ -1.81
TPM1	YNL079C	YNR061C	P53747	219 aa		3.77	□□□□□ -1.81
TPM1	YNL079C	ERG13	P54839	491 aa	Known RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	SVL3	Q03088	825 aa	Known RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	OPY2	Q06810	360 aa		3.77	□□□□□ -1.81
TPM1	YNL079C	KEL3	Q08979	651 aa	Predicted RBP	3.77	□□□□□ -1.81
TPM1	YNL079C	CEX1	Q12453	761 aa		3.77	□□□□□ -1.81
TPM1	YNL079C	SUI3	P09064	285 aa	Known RBP	3.76	□□□□□ -1.81
TPM1	YNL079C	COQ3	P27680	312 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	MSS51	P32335	436 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	CAB3	P36076	571 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	UBP13	P38187	747 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	ARN1	P38731	627 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	TFG2	P41896	400 aa	Predicted RBP	3.76	□□□□□ -1.81
TPM1	YNL079C	PSA1	P41940	361 aa	Known RBP	3.76	□□□□□ -1.81
TPM1	YNL079C	YJL107C	P42947	387 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	SWP82	P43554	623 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	YGL138C	P53122	345 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	CUE3	P53137	624 aa	Known RBP	3.76	□□□□□ -1.81
TPM1	YNL079C	MEP3	P53390	489 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	CBK1	P53894	756 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	RPT6	Q01939	405 aa	Known RBP	3.76	□□□□□ -1.81
TPM1	YNL079C	RCO1	Q04779	684 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	YDR341C	Q05506	607 aa	Known RBP	3.76	□□□□□ -1.81
TPM1	YNL079C	NUS1	Q12063	375 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	RRG1	Q12167	365 aa	Predicted RBP	3.76	□□□□□ -1.81
TPM1	YNL079C	CRC1	Q12289	327 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	NBL1	Q3E7Y6	73 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	FLO11	P08640	1367 aa		3.76	□□□□□ -1.81
TPM1	YNL079C	GAL4	P04386	881 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	ALG1	P16661	449 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	PTP1	P25044	335 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	BMH1	P29311	267 aa	Known RBP	3.75	□□□□□ -1.81
TPM1	YNL079C	MCM10	P32354	571 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	MRP20	P32387	263 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	NTR2	P36118	322 aa	Predicted RBP	3.75	□□□□□ -1.81
TPM1	YNL079C	ADE17	P38009	592 aa	Known RBP	3.75	□□□□□ -1.81
TPM1	YNL079C	TOM71	P38825	639 aa	Known RBP	3.75	□□□□□ -1.81
TPM1	YNL079C	SEC31	P38968	1273 aa	Known RBP	3.75	□□□□□ -1.81
TPM1	YNL079C	SHC1	P39000	512 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	PES4	P39684	611 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	NOC2	P39744	710 aa	Known RBP	3.75	□□□□□ -1.81
TPM1	YNL079C	TPA1	P40032	644 aa	Known RBP	3.75	□□□□□ -1.81
TPM1	YNL079C	DPH1	P40487	425 aa	Known RBP	3.75	□□□□□ -1.81
TPM1	YNL079C	NET1	P47035	1189 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	YMR018W	Q04364	514 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	PDR8	Q06149	701 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	MMR1	Q06324	491 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	DSE3	Q08729	430 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	PFA4	Q12006	378 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	YOR019W	Q99248	730 aa		3.75	□□□□□ -1.81
TPM1	YNL079C	FUM1	P08417	488 aa	Known RBP	3.74	□□□□□ -1.81
TPM1	YNL079C	MRP2	P10663	115 aa	Predicted RBP	3.74	□□□□□ -1.81
TPM1	YNL079C	YAP1	P19880	650 aa	Known RBP	3.74	□□□□□ -1.81
TPM1	YNL079C	PRE8	P23639	250 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	CHS3	P29465	1165 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	OCT1	P35999	772 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	LHS1	P36016	881 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	MRX1	P40050	688 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	FMP10	P40098	244 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	CFD1	P40558	293 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	RET3	P53600	189 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	COP1	P53622	1201 aa	Known RBP	3.74	□□□□□ -1.81
TPM1	YNL079C	RTC4	P53850	401 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	MDM1	Q01846	1127 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	RSM28	Q03430	361 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	SKG3	Q06315	1026 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	NBP2	Q12163	236 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	TIP41	Q12199	356 aa		3.74	□□□□□ -1.81
TPM1	YNL079C	TUS1	Q06412	1307 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	HIS4	P00815	799 aa	Known RBP	3.73	□□□□□ -1.81
TPM1	YNL079C	PET111	P08468	800 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	THR4	P16120	514 aa	Known RBP	3.73	□□□□□ -1.81
TPM1	YNL079C	YCR006C	P25350	157 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	CDC15	P27636	974 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	SAC6	P32599	642 aa	Known RBP	3.73	□□□□□ -1.81
TPM1	YNL079C	ECM32	P32644	1121 aa	Known RBP	3.73	□□□□□ -1.81
TPM1	YNL079C	SOF1	P33750	489 aa	Known RBP	3.73	□□□□□ -1.81
TPM1	YNL079C	CST26	P38226	397 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	YIL024C	P40543	189 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	LYS14	P40971	790 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	IME4	P41833	600 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	SIP4	P46954	829 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	MUB1	Q03162	620 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	HCR1	Q05775	265 aa	Known RBP	3.73	□□□□□ -1.81
TPM1	YNL079C	YLR455W	Q06188	304 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	PIG1	Q06216	648 aa		3.73	□□□□□ -1.81
TPM1	YNL079C	SMD2	Q06217	110 aa	Known RBP	3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms