Protein–RNA interactions for Protein: P54839

ERG13, Hydroxymethylglutaryl-CoA synthase, yeastyeast

Known RBP Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ERG13P54839 YML009W-BYML009W-B 477 nt19.3■□□□□ 0.68
ERG13P54839 NSR1YGR159C 1245 nt19.02■□□□□ 0.64
ERG13P54839 NOP1YDL014W 984 nt18.81■□□□□ 0.6
ERG13P54839 YKL036CYKL036C 393 nt17.45■□□□□ 0.38
ERG13P54839 MDJ1YFL016C 1536 nt16.8■□□□□ 0.28
ERG13P54839 Q0297Q0297 156 nt16.46■□□□□ 0.23
ERG13P54839 SRX1YKL086W 384 nt16.39■□□□□ 0.21
ERG13P54839 YJL027CYJL027C 417 nt16.34■□□□□ 0.21
ERG13P54839 SCS3YGL126W 1143 nt15.94■□□□□ 0.14
ERG13P54839 YCR051WYCR051W 669 nt15.61■□□□□ 0.09
ERG13P54839 YOL085CYOL085C 342 nt15.1■□□□□ 0.01
ERG13P54839 PKP1YIL042C 1185 nt14.87□□□□□ -0.03
ERG13P54839 DBP2YNL112W 1641 nt14.85□□□□□ -0.03
ERG13P54839 RPP1BYDL130W 321 nt14.79□□□□□ -0.04
ERG13P54839 TRN1tP(UGG)A 72 nt14.75□□□□□ -0.05
ERG13P54839 SUF9tP(UGG)F 72 nt14.75□□□□□ -0.05
ERG13P54839 SUF8tP(UGG)H 72 nt14.75□□□□□ -0.05
ERG13P54839 tP(UGG)LtP(UGG)L 72 nt14.75□□□□□ -0.05
ERG13P54839 SUF7tP(UGG)M 72 nt14.75□□□□□ -0.05
ERG13P54839 tP(UGG)N1tP(UGG)N1 72 nt14.75□□□□□ -0.05
ERG13P54839 tP(UGG)N2tP(UGG)N2 72 nt14.75□□□□□ -0.05
ERG13P54839 tP(UGG)O1tP(UGG)O1 72 nt14.75□□□□□ -0.05
ERG13P54839 SUF11tP(UGG)O2 72 nt14.75□□□□□ -0.05
ERG13P54839 CCC1YLR220W 969 nt14.65□□□□□ -0.06
ERG13P54839 ATS1YAL020C 1002 nt14.28□□□□□ -0.12
ERG13P54839 YBR190WYBR190W 312 nt14.27□□□□□ -0.13
ERG13P54839 SCJ1YMR214W 1134 nt14.25□□□□□ -0.13
ERG13P54839 PET122YER153C 765 nt14.12□□□□□ -0.15
ERG13P54839 RVS167YDR388W 1449 nt14.09□□□□□ -0.15
ERG13P54839 SCR1SCR1 522 nt14.03□□□□□ -0.16
ERG13P54839 RTC3YHR087W 336 nt14.02□□□□□ -0.17
ERG13P54839 tP(UGG)O3tP(UGG)O3 72 nt14□□□□□ -0.17
ERG13P54839 RRN5YLR141W 1092 nt13.71□□□□□ -0.21
ERG13P54839 SHR5YOL110W 714 nt13.6□□□□□ -0.23
ERG13P54839 YDJ1YNL064C 1230 nt13.54□□□□□ -0.24
ERG13P54839 RSB1YOR049C 1065 nt13.51□□□□□ -0.25
ERG13P54839 YER088W-BYER088W-B 147 nt13.45□□□□□ -0.26
ERG13P54839 GAR1YHR089C 618 nt13.25□□□□□ -0.29
ERG13P54839 DEP1YAL013W 1218 nt13.19□□□□□ -0.3
ERG13P54839 PST2YDR032C 597 nt13.18□□□□□ -0.3
ERG13P54839 URN1YPR152C 1398 nt13.14□□□□□ -0.31
ERG13P54839 RPN10YHR200W 807 nt13.01□□□□□ -0.33
ERG13P54839 YNL208WYNL208W 600 nt12.98□□□□□ -0.33
ERG13P54839 OPI9YLR338W 858 nt12.9□□□□□ -0.34
ERG13P54839 PUT4YOR348C 1884 nt12.82□□□□□ -0.36
ERG13P54839 SAH1YER043C 1350 nt12.8□□□□□ -0.36
ERG13P54839 TIR1YER011W 765 nt12.78□□□□□ -0.36
ERG13P54839 YKL097CYKL097C 411 nt12.78□□□□□ -0.36
ERG13P54839 ARE1YCR048W 1833 nt12.64□□□□□ -0.39
ERG13P54839 SHU1YHL006C 453 nt12.63□□□□□ -0.39
ERG13P54839 SSA1YAL005C 1929 nt12.58□□□□□ -0.4
ERG13P54839 PUN1YLR414C 792 nt12.55□□□□□ -0.4
ERG13P54839 YHR049C-AYHR049C-A 297 nt12.54□□□□□ -0.4
ERG13P54839 YJR018WYJR018W 363 nt12.53□□□□□ -0.4
ERG13P54839 POA1YBR022W 534 nt12.48□□□□□ -0.41
ERG13P54839 YAL037C-BYAL037C-B 975 nt12.41□□□□□ -0.42
ERG13P54839 SRB2YHR041C 633 nt12.38□□□□□ -0.43
ERG13P54839 PTC2YER089C 1395 nt12.37□□□□□ -0.43
ERG13P54839 RPP2BYDR382W 333 nt12.35□□□□□ -0.43
ERG13P54839 YJR120WYJR120W 351 nt12.32□□□□□ -0.44
ERG13P54839 BUD23YCR047C 828 nt12.27□□□□□ -0.45
ERG13P54839 WWM1YFL010C 636 nt12.23□□□□□ -0.45
ERG13P54839 YGR021WYGR021W 873 nt12.23□□□□□ -0.45
ERG13P54839 SSA3YBL075C 1950 nt12.19□□□□□ -0.46
ERG13P54839 YOR139CYOR139C 393 nt12.19□□□□□ -0.46
ERG13P54839 BSC6YOL137W 1494 nt12.18□□□□□ -0.46
ERG13P54839 NAB2YGL122C 1578 nt12.18□□□□□ -0.46
ERG13P54839 HOM6YJR139C 1080 nt12.16□□□□□ -0.46
ERG13P54839 MNP1YGL068W 585 nt12.14□□□□□ -0.47
ERG13P54839 NPL3YDR432W 1245 nt12.12□□□□□ -0.47
ERG13P54839 BDH2YAL061W 1254 nt12.08□□□□□ -0.48
ERG13P54839 FPR4YLR449W 1179 nt12.08□□□□□ -0.48
ERG13P54839 INM2YDR287W 879 nt12.07□□□□□ -0.48
ERG13P54839 DAL1YIR027C 1383 nt12.05□□□□□ -0.48
ERG13P54839 YFL021C-AYFL021C-A 855 nt12.04□□□□□ -0.48
ERG13P54839 FIS1YIL065C 468 nt12.03□□□□□ -0.48
ERG13P54839 RKM5YLR137W 1104 nt12□□□□□ -0.49
ERG13P54839 YBL100CYBL100C 315 nt12□□□□□ -0.49
ERG13P54839 YOL037CYOL037C 354 nt12□□□□□ -0.49
ERG13P54839 PHO4YFR034C 939 nt11.95□□□□□ -0.5
ERG13P54839 LSM3YLR438C-A 270 nt11.94□□□□□ -0.5
ERG13P54839 TRM9YML014W 840 nt11.85□□□□□ -0.51
ERG13P54839 FUN26YAL022C 1554 nt11.84□□□□□ -0.51
ERG13P54839 tM(CAU)CtM(CAU)C 72 nt11.7□□□□□ -0.54
ERG13P54839 IMT4tM(CAU)E 72 nt11.7□□□□□ -0.54
ERG13P54839 IMT3tM(CAU)J3 72 nt11.7□□□□□ -0.54
ERG13P54839 IMT1tM(CAU)O1 72 nt11.7□□□□□ -0.54
ERG13P54839 IMT2tM(CAU)P 72 nt11.7□□□□□ -0.54
ERG13P54839 CCT6YDR188W 1641 nt11.7□□□□□ -0.54
ERG13P54839 ALF1YNL148C 765 nt11.69□□□□□ -0.54
ERG13P54839 YLR281CYLR281C 468 nt11.68□□□□□ -0.54
ERG13P54839 WHI5YOR083W 888 nt11.64□□□□□ -0.55
ERG13P54839 YPS1YLR120C 1710 nt11.63□□□□□ -0.55
ERG13P54839 PUS2YGL063W 1113 nt11.63□□□□□ -0.55
ERG13P54839 SUF2tP(AGG)C 72 nt11.63□□□□□ -0.55
ERG13P54839 SUF10tP(AGG)N 72 nt11.63□□□□□ -0.55
ERG13P54839 YDR095CYDR095C 411 nt11.59□□□□□ -0.55
ERG13P54839 YHR165W-AYHR165W-A 312 nt11.55□□□□□ -0.56
ERG13P54839 YLR154C-GYLR154C-G 150 nt11.53□□□□□ -0.56
ERG13P54839 SPT5YML010W 3192 nt11.51□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms