RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	TRM8	Q12009	286 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	NUS1	Q12063	375 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	ADY2	P25613	283 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	CDC15	P27636	974 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	BMH1	P29311	267 aa	Known RBP	4.85	□□□□□ -1.63
NUP42	YDR192C	YBL028C	P38202	106 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	APD1	P38281	316 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	UBP7	P40453	1071 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	MNT3	P40549	630 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	YPT11	P48559	417 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	VPS4	P52917	437 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	MEP3	P53390	489 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	YVH1	Q02256	364 aa	Known RBP	4.85	□□□□□ -1.63
NUP42	YDR192C	YML119W	Q03208	357 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	MYO5	Q04439	1219 aa	Known RBP	4.85	□□□□□ -1.63
NUP42	YDR192C	RCO1	Q04779	684 aa		4.85	□□□□□ -1.63
NUP42	YDR192C	FUM1	P08417	488 aa	Known RBP	4.84	□□□□□ -1.63
NUP42	YDR192C	GUK1	P15454	187 aa	Known RBP	4.84	□□□□□ -1.63
NUP42	YDR192C	THR4	P16120	514 aa	Known RBP	4.84	□□□□□ -1.63
NUP42	YDR192C	AAD3	P25612	363 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	HES1	P35843	434 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	MRPL10	P36520	322 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	VBA2	P38358	474 aa	Known RBP	4.84	□□□□□ -1.63
NUP42	YDR192C	ERC1	P38767	581 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	AXL2	P38928	823 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	PHM8	P40025	321 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	RRT6	P53117	311 aa	Predicted RBP	4.84	□□□□□ -1.63
NUP42	YDR192C	CUE3	P53137	624 aa	Known RBP	4.84	□□□□□ -1.63
NUP42	YDR192C	IMO32	P53219	342 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	YGR117C	P53270	476 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	DCP2	P53550	970 aa	Known RBP	4.84	□□□□□ -1.63
NUP42	YDR192C	BNI5	P53890	448 aa	Known RBP	4.84	□□□□□ -1.63
NUP42	YDR192C	MDM1	Q01846	1127 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	RAD33	Q04231	177 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	SKG3	Q06315	1026 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	DSE3	Q08729	430 aa		4.84	□□□□□ -1.63
NUP42	YDR192C	GET3	Q12154	354 aa	Known RBP	4.84	□□□□□ -1.63
NUP42	YDR192C	UTP10	P42945	1769 aa	Known RBP	4.83	□□□□□ -1.64
NUP42	YDR192C	TY1B-A	O13527	1196 aa	Known RBP	4.83	□□□□□ -1.64
NUP42	YDR192C	BI2	P03873	423 aa		4.83	□□□□□ -1.64
NUP42	YDR192C	SES1	P07284	462 aa	Known RBP	4.83	□□□□□ -1.64
NUP42	YDR192C	LAC1	P28496	418 aa		4.83	□□□□□ -1.64
NUP42	YDR192C	YMC1	P32331	307 aa		4.83	□□□□□ -1.64
NUP42	YDR192C	SAC6	P32599	642 aa	Known RBP	4.83	□□□□□ -1.64
NUP42	YDR192C	MPE1	P35728	441 aa	Known RBP	4.83	□□□□□ -1.64
NUP42	YDR192C	VAB2	P40003	282 aa		4.83	□□□□□ -1.64
NUP42	YDR192C	PCI8	P40512	444 aa		4.83	□□□□□ -1.64
NUP42	YDR192C	EPL1	P43572	832 aa		4.83	□□□□□ -1.64
NUP42	YDR192C	VTC2	P43585	828 aa		4.83	□□□□□ -1.64
NUP42	YDR192C	FYV8	P46949	817 aa	Known RBP	4.83	□□□□□ -1.64
NUP42	YDR192C	RET3	P53600	189 aa		4.83	□□□□□ -1.64
NUP42	YDR192C	TRM44	Q02648	567 aa	Known RBP	4.83	□□□□□ -1.64
NUP42	YDR192C	YML053C	Q04978	212 aa		4.83	□□□□□ -1.64
NUP42	YDR192C	VIP1	Q06685	1146 aa	Known RBP	4.83	□□□□□ -1.64
NUP42	YDR192C	PRS5	Q12265	496 aa	Known RBP	4.83	□□□□□ -1.64
NUP42	YDR192C	VPS13	Q07878	3144 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	FOB1	O13329	566 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	ALG1	P16661	449 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	CKA2	P19454	339 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	KES1	P35844	434 aa	Known RBP	4.82	□□□□□ -1.64
NUP42	YDR192C	RKM3	P38222	552 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	PFK26	P40433	827 aa	Known RBP	4.82	□□□□□ -1.64
NUP42	YDR192C	SMC3	P47037	1230 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	YGL138C	P53122	345 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	BSC5	P53755	489 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	YAT1	P80235	687 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	FMP30	Q02883	468 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	MMR1	Q06324	491 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	TMA16	Q08687	178 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	SKM1	Q12469	655 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	VCX1	Q99385	411 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	FIG2	P25653	1609 aa		4.82	□□□□□ -1.64
NUP42	YDR192C	ILV2	P07342	687 aa	Known RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	RPB2	P08518	1224 aa	Known RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	GPA1	P08539	472 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	YML003W	P0CF16	290 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	HSC82	P15108	705 aa	Known RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	FRS2	P15625	503 aa	Known RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	RRP43	P25359	394 aa	Predicted RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	GSY2	P27472	705 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	YJU2	P28320	278 aa	Predicted RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	ADE17	P38009	592 aa	Known RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	NOC2	P39744	710 aa	Known RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	EXO1	P39875	702 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	SAP1	P39955	897 aa	Known RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	YER130C	P39959	443 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	LYS14	P40971	790 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	ARC1	P46672	376 aa	Known RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	YJL043W	P47053	257 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	SEC5	P89102	971 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	REG1	Q00816	1014 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	YDR109C	Q04585	715 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	SNO4	Q04902	237 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	HRD3	Q05787	833 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	HSP33	Q08914	237 aa	Known RBP	4.81	□□□□□ -1.64
NUP42	YDR192C	HSP32	Q08992	237 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	SUT2	Q12286	268 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	PCD1	Q12524	340 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	SMC6	Q12749	1114 aa		4.81	□□□□□ -1.64
NUP42	YDR192C	YOR111W	Q99210	232 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms