Protein–RNA interactions for Protein: P39875

EXO1, Exodeoxyribonuclease 1, yeastyeast

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
EXO1P39875 YML009W-BYML009W-B 477 nt20.92■□□□□ 0.94
EXO1P39875 NSR1YGR159C 1245 nt20.59■□□□□ 0.89
EXO1P39875 NOP1YDL014W 984 nt20.42■□□□□ 0.86
EXO1P39875 YKL036CYKL036C 393 nt19.02■□□□□ 0.64
EXO1P39875 MDJ1YFL016C 1536 nt18.09■□□□□ 0.49
EXO1P39875 Q0297Q0297 156 nt17.91■□□□□ 0.46
EXO1P39875 YJL027CYJL027C 417 nt17.82■□□□□ 0.44
EXO1P39875 SRX1YKL086W 384 nt17.82■□□□□ 0.44
EXO1P39875 SCS3YGL126W 1143 nt17.39■□□□□ 0.37
EXO1P39875 YCR051WYCR051W 669 nt16.97■□□□□ 0.31
EXO1P39875 YOL085CYOL085C 342 nt16.45■□□□□ 0.22
EXO1P39875 PKP1YIL042C 1185 nt16.21■□□□□ 0.19
EXO1P39875 RPP1BYDL130W 321 nt16.08■□□□□ 0.16
EXO1P39875 DBP2YNL112W 1641 nt16.05■□□□□ 0.16
EXO1P39875 TRN1tP(UGG)A 72 nt15.98■□□□□ 0.15
EXO1P39875 SUF9tP(UGG)F 72 nt15.98■□□□□ 0.15
EXO1P39875 SUF8tP(UGG)H 72 nt15.98■□□□□ 0.15
EXO1P39875 tP(UGG)LtP(UGG)L 72 nt15.98■□□□□ 0.15
EXO1P39875 SUF7tP(UGG)M 72 nt15.98■□□□□ 0.15
EXO1P39875 tP(UGG)N1tP(UGG)N1 72 nt15.98■□□□□ 0.15
EXO1P39875 tP(UGG)N2tP(UGG)N2 72 nt15.98■□□□□ 0.15
EXO1P39875 tP(UGG)O1tP(UGG)O1 72 nt15.98■□□□□ 0.15
EXO1P39875 SUF11tP(UGG)O2 72 nt15.98■□□□□ 0.15
EXO1P39875 CCC1YLR220W 969 nt15.88■□□□□ 0.13
EXO1P39875 SCJ1YMR214W 1134 nt15.65■□□□□ 0.1
EXO1P39875 ATS1YAL020C 1002 nt15.62■□□□□ 0.09
EXO1P39875 YBR190WYBR190W 312 nt15.37■□□□□ 0.05
EXO1P39875 PET122YER153C 765 nt15.34■□□□□ 0.05
EXO1P39875 SCR1SCR1 522 nt15.27■□□□□ 0.04
EXO1P39875 RVS167YDR388W 1449 nt15.21■□□□□ 0.03
EXO1P39875 tP(UGG)O3tP(UGG)O3 72 nt15.2■□□□□ 0.02
EXO1P39875 RTC3YHR087W 336 nt15.1■□□□□ 0.01
EXO1P39875 RRN5YLR141W 1092 nt14.93□□□□□ -0.02
EXO1P39875 RSB1YOR049C 1065 nt14.71□□□□□ -0.05
EXO1P39875 YDJ1YNL064C 1230 nt14.69□□□□□ -0.06
EXO1P39875 SHR5YOL110W 714 nt14.69□□□□□ -0.06
EXO1P39875 YER088W-BYER088W-B 147 nt14.62□□□□□ -0.07
EXO1P39875 PST2YDR032C 597 nt14.41□□□□□ -0.1
EXO1P39875 GAR1YHR089C 618 nt14.37□□□□□ -0.11
EXO1P39875 DEP1YAL013W 1218 nt14.24□□□□□ -0.13
EXO1P39875 SSA3YBL075C 1950 nt14.19□□□□□ -0.14
EXO1P39875 URN1YPR152C 1398 nt14.18□□□□□ -0.14
EXO1P39875 RPN10YHR200W 807 nt14.03□□□□□ -0.16
EXO1P39875 YNL208WYNL208W 600 nt14.03□□□□□ -0.16
EXO1P39875 YKL097CYKL097C 411 nt13.98□□□□□ -0.17
EXO1P39875 OPI9YLR338W 858 nt13.9□□□□□ -0.18
EXO1P39875 TIR1YER011W 765 nt13.86□□□□□ -0.19
EXO1P39875 SHU1YHL006C 453 nt13.79□□□□□ -0.2
EXO1P39875 SAH1YER043C 1350 nt13.77□□□□□ -0.21
EXO1P39875 PUT4YOR348C 1884 nt13.76□□□□□ -0.21
EXO1P39875 SSA1YAL005C 1929 nt13.63□□□□□ -0.23
EXO1P39875 ARE1YCR048W 1833 nt13.58□□□□□ -0.24
EXO1P39875 YAL037C-BYAL037C-B 975 nt13.55□□□□□ -0.24
EXO1P39875 YJR018WYJR018W 363 nt13.54□□□□□ -0.24
EXO1P39875 PUN1YLR414C 792 nt13.52□□□□□ -0.25
EXO1P39875 YHR049C-AYHR049C-A 297 nt13.44□□□□□ -0.26
EXO1P39875 SRB2YHR041C 633 nt13.41□□□□□ -0.26
EXO1P39875 POA1YBR022W 534 nt13.4□□□□□ -0.26
EXO1P39875 RPP2BYDR382W 333 nt13.35□□□□□ -0.27
EXO1P39875 YOR139CYOR139C 393 nt13.35□□□□□ -0.27
EXO1P39875 PTC2YER089C 1395 nt13.32□□□□□ -0.28
EXO1P39875 YJR120WYJR120W 351 nt13.3□□□□□ -0.28
EXO1P39875 WWM1YFL010C 636 nt13.29□□□□□ -0.28
EXO1P39875 YGR021WYGR021W 873 nt13.27□□□□□ -0.29
EXO1P39875 NPL3YDR432W 1245 nt13.25□□□□□ -0.29
EXO1P39875 HOM6YJR139C 1080 nt13.21□□□□□ -0.29
EXO1P39875 MNP1YGL068W 585 nt13.2□□□□□ -0.3
EXO1P39875 BUD23YCR047C 828 nt13.19□□□□□ -0.3
EXO1P39875 NAB2YGL122C 1578 nt13.11□□□□□ -0.31
EXO1P39875 BDH2YAL061W 1254 nt13.08□□□□□ -0.32
EXO1P39875 YFL021C-AYFL021C-A 855 nt13.06□□□□□ -0.32
EXO1P39875 YOL037CYOL037C 354 nt13.05□□□□□ -0.32
EXO1P39875 BSC6YOL137W 1494 nt13.04□□□□□ -0.32
EXO1P39875 INM2YDR287W 879 nt13.03□□□□□ -0.32
EXO1P39875 RKM5YLR137W 1104 nt13.02□□□□□ -0.33
EXO1P39875 FPR4YLR449W 1179 nt13.01□□□□□ -0.33
EXO1P39875 DAL1YIR027C 1383 nt12.98□□□□□ -0.33
EXO1P39875 LSM3YLR438C-A 270 nt12.95□□□□□ -0.34
EXO1P39875 YBL100CYBL100C 315 nt12.94□□□□□ -0.34
EXO1P39875 FIS1YIL065C 468 nt12.9□□□□□ -0.34
EXO1P39875 PHO4YFR034C 939 nt12.85□□□□□ -0.35
EXO1P39875 tM(CAU)CtM(CAU)C 72 nt12.83□□□□□ -0.36
EXO1P39875 IMT4tM(CAU)E 72 nt12.83□□□□□ -0.36
EXO1P39875 IMT3tM(CAU)J3 72 nt12.83□□□□□ -0.36
EXO1P39875 IMT1tM(CAU)O1 72 nt12.83□□□□□ -0.36
EXO1P39875 IMT2tM(CAU)P 72 nt12.83□□□□□ -0.36
EXO1P39875 TRM9YML014W 840 nt12.83□□□□□ -0.36
EXO1P39875 FUN26YAL022C 1554 nt12.78□□□□□ -0.36
EXO1P39875 YLR281CYLR281C 468 nt12.72□□□□□ -0.37
EXO1P39875 PUS2YGL063W 1113 nt12.71□□□□□ -0.37
EXO1P39875 WHI5YOR083W 888 nt12.68□□□□□ -0.38
EXO1P39875 CCT6YDR188W 1641 nt12.64□□□□□ -0.39
EXO1P39875 ALF1YNL148C 765 nt12.6□□□□□ -0.39
EXO1P39875 SPT5YML010W 3192 nt12.56□□□□□ -0.4
EXO1P39875 SUF2tP(AGG)C 72 nt12.56□□□□□ -0.4
EXO1P39875 SUF10tP(AGG)N 72 nt12.56□□□□□ -0.4
EXO1P39875 YLR154C-GYLR154C-G 150 nt12.51□□□□□ -0.41
EXO1P39875 YPS1YLR120C 1710 nt12.51□□□□□ -0.41
EXO1P39875 YDR095CYDR095C 411 nt12.46□□□□□ -0.41
EXO1P39875 DSK2YMR276W 1122 nt12.43□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 41.6 ms