RNA–Protein interactions for RNA: YKR004C

ECM9, Transcript of Non-essential protein of unknown function, yeast

Gene ECM9, Length 1,134 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM9	YKR004C	RKM3	P38222	552 aa		4.28	□□□□□ -1.72
ECM9	YKR004C	SDS24	P38314	527 aa		4.28	□□□□□ -1.72
ECM9	YKR004C	STL1	P39932	569 aa		4.28	□□□□□ -1.72
ECM9	YKR004C	YND1	P40009	630 aa		4.28	□□□□□ -1.72
ECM9	YKR004C	SKP2	P42843	763 aa		4.28	□□□□□ -1.72
ECM9	YKR004C	YOX1	P34161	385 aa		4.27	□□□□□ -1.73
ECM9	YKR004C	ERC1	P38767	581 aa		4.27	□□□□□ -1.73
ECM9	YKR004C	SSP120	P39931	234 aa	Known RBP	4.27	□□□□□ -1.73
ECM9	YKR004C	PCL6	P40038	420 aa		4.27	□□□□□ -1.73
ECM9	YKR004C	NIT2	P47016	307 aa		4.27	□□□□□ -1.73
ECM9	YKR004C	CRF1	Q04930	467 aa		4.27	□□□□□ -1.73
ECM9	YKR004C	COX11	P19516	300 aa	Known RBP	4.26	□□□□□ -1.73
ECM9	YKR004C	RPF2	P36160	344 aa	Known RBP	4.26	□□□□□ -1.73
ECM9	YKR004C	TPA1	P40032	644 aa	Known RBP	4.26	□□□□□ -1.73
ECM9	YKR004C	QRI7	P43122	407 aa		4.26	□□□□□ -1.73
ECM9	YKR004C	SPC105	P53148	917 aa		4.26	□□□□□ -1.73
ECM9	YKR004C	THI3	Q07471	609 aa		4.26	□□□□□ -1.73
ECM9	YKR004C	LEA1	Q08963	238 aa	Predicted RBP	4.26	□□□□□ -1.73
ECM9	YKR004C	YGR161W-C	Q3E744	92 aa		4.26	□□□□□ -1.73
ECM9	YKR004C	VFA1	P40080	203 aa		4.25	□□□□□ -1.73
ECM9	YKR004C	CDC1	P40986	491 aa		4.25	□□□□□ -1.73
ECM9	YKR004C	TRS31	Q03337	283 aa		4.25	□□□□□ -1.73
ECM9	YKR004C	FMP42	Q04991	504 aa		4.25	□□□□□ -1.73
ECM9	YKR004C	PDR8	Q06149	701 aa		4.25	□□□□□ -1.73
ECM9	YKR004C	GPN2	Q08726	347 aa	Predicted RBP	4.25	□□□□□ -1.73
ECM9	YKR004C	MNN2	P38069	597 aa		4.24	□□□□□ -1.73
ECM9	YKR004C	VPS41	P38959	992 aa		4.24	□□□□□ -1.73
ECM9	YKR004C	VPS25	P47142	202 aa		4.24	□□□□□ -1.73
ECM9	YKR004C	HOL1	P53389	586 aa		4.24	□□□□□ -1.73
ECM9	YKR004C	DBP10	Q12389	995 aa	Known RBP	4.24	□□□□□ -1.73
ECM9	YKR004C	SIP1	P32578	815 aa		4.23	□□□□□ -1.73
ECM9	YKR004C	OCT1	P35999	772 aa		4.23	□□□□□ -1.73
ECM9	YKR004C	ARB1	P40024	610 aa	Known RBP	4.23	□□□□□ -1.73
ECM9	YKR004C	YPR003C	P53394	754 aa		4.23	□□□□□ -1.73
ECM9	YKR004C	EAF7	P53911	425 aa	Known RBP	4.23	□□□□□ -1.73
ECM9	YKR004C	ECM38	Q05902	660 aa	Predicted RBP	4.23	□□□□□ -1.73
ECM9	YKR004C	SLD3	P53135	668 aa		4.22	□□□□□ -1.73
ECM9	YKR004C	IZH1	Q03419	316 aa		4.22	□□□□□ -1.73
ECM9	YKR004C	TRI1	Q05024	226 aa		4.22	□□□□□ -1.73
ECM9	YKR004C	CTT1	P06115	562 aa		4.21	□□□□□ -1.74
ECM9	YKR004C	POL31	P46957	487 aa		4.21	□□□□□ -1.74
ECM9	YKR004C	NPA3	P47122	385 aa		4.21	□□□□□ -1.74
ECM9	YKR004C	YGL036W	P53185	909 aa	Predicted RBP	4.21	□□□□□ -1.74
ECM9	YKR004C	YLR112W	Q12130	139 aa		4.21	□□□□□ -1.74
ECM9	YKR004C	RPS7A	P26786	190 aa	Known RBP	4.2	□□□□□ -1.74
ECM9	YKR004C	HEM12	P32347	362 aa	Predicted RBP	4.2	□□□□□ -1.74
ECM9	YKR004C	BZZ1	P38822	633 aa		4.2	□□□□□ -1.74
ECM9	YKR004C	CAC2	Q04199	468 aa		4.2	□□□□□ -1.74
ECM9	YKR004C	PIG1	Q06216	648 aa		4.2	□□□□□ -1.74
ECM9	YKR004C	PSF3	Q12146	194 aa		4.2	□□□□□ -1.74
ECM9	YKR004C	CDC23	P16522	626 aa		4.19	□□□□□ -1.74
ECM9	YKR004C	YBR139W	P38109	508 aa		4.19	□□□□□ -1.74
ECM9	YKR004C	DHH1	P39517	506 aa	Known RBP	4.19	□□□□□ -1.74
ECM9	YKR004C	ASG1	P40467	964 aa		4.19	□□□□□ -1.74
ECM9	YKR004C	ARP9	Q05123	467 aa		4.19	□□□□□ -1.74
ECM9	YKR004C	PEX15	Q08215	383 aa		4.19	□□□□□ -1.74
ECM9	YKR004C	MCH4	Q08268	501 aa		4.19	□□□□□ -1.74
ECM9	YKR004C	PDE1	P22434	369 aa		4.18	□□□□□ -1.74
ECM9	YKR004C	SWC3	P31376	625 aa		4.18	□□□□□ -1.74
ECM9	YKR004C	DED81	P38707	554 aa	Known RBP	4.18	□□□□□ -1.74
ECM9	YKR004C	EMP65	P40085	556 aa		4.18	□□□□□ -1.74
ECM9	YKR004C	UBP8	P50102	471 aa		4.18	□□□□□ -1.74
ECM9	YKR004C	YRB30	P53107	440 aa	Predicted RBP	4.18	□□□□□ -1.74
ECM9	YKR004C	POS5	Q06892	414 aa		4.18	□□□□□ -1.74
ECM9	YKR004C	APL5	Q08951	932 aa	Known RBP	4.18	□□□□□ -1.74
ECM9	YKR004C	TIP41	Q12199	356 aa		4.18	□□□□□ -1.74
ECM9	YKR004C	YBR255C-A	Q3E776	120 aa		4.18	□□□□□ -1.74
ECM9	YKR004C	FPR3	P38911	411 aa	Known RBP	4.17	□□□□□ -1.74
ECM9	YKR004C	ESBP6	P53918	673 aa		4.17	□□□□□ -1.74
ECM9	YKR004C	SND1	Q04007	877 aa		4.17	□□□□□ -1.74
ECM9	YKR004C	ECI1	Q05871	280 aa		4.17	□□□□□ -1.74
ECM9	YKR004C	TAH18	Q12181	623 aa		4.17	□□□□□ -1.74
ECM9	YKR004C	LAC1	P28496	418 aa		4.16	□□□□□ -1.74
ECM9	YKR004C	EFM2	P38347	419 aa		4.16	□□□□□ -1.74
ECM9	YKR004C	PSP1	P50896	841 aa	Known RBP	4.16	□□□□□ -1.74
ECM9	YKR004C	TRE2	Q08693	809 aa		4.16	□□□□□ -1.74
ECM9	YKR004C	YNL034W	P53963	612 aa		4.15	□□□□□ -1.75
ECM9	YKR004C	VPS64	Q03944	604 aa		4.15	□□□□□ -1.75
ECM9	YKR004C	SWF1	Q04629	336 aa		4.15	□□□□□ -1.75
ECM9	YKR004C	YMR254C	Q04838	102 aa		4.15	□□□□□ -1.75
ECM9	YKR004C	COX1	P00401	534 aa		4.14	□□□□□ -1.75
ECM9	YKR004C	SEC1	P30619	724 aa	Known RBP	4.14	□□□□□ -1.75
ECM9	YKR004C	YGL081W	P53156	320 aa		4.14	□□□□□ -1.75
ECM9	YKR004C	ESF2	P53743	316 aa	Known RBP	4.14	□□□□□ -1.75
ECM9	YKR004C	CRZ1	P53968	678 aa		4.14	□□□□□ -1.75
ECM9	YKR004C	FRE3	Q08905	711 aa		4.14	□□□□□ -1.75
ECM9	YKR004C	TGL1	P34163	548 aa		4.13	□□□□□ -1.75
ECM9	YKR004C	SCS2	P40075	244 aa	Known RBP	4.13	□□□□□ -1.75
ECM9	YKR004C	CUL3	P53202	744 aa		4.13	□□□□□ -1.75
ECM9	YKR004C	AIM6	Q07716	390 aa		4.13	□□□□□ -1.75
ECM9	YKR004C	VAS1	P07806	1104 aa	Known RBP	4.12	□□□□□ -1.75
ECM9	YKR004C	YCR006C	P25350	157 aa		4.12	□□□□□ -1.75
ECM9	YKR004C	HES1	P35843	434 aa		4.12	□□□□□ -1.75
ECM9	YKR004C	IMP4	P53941	290 aa	Known RBP	4.12	□□□□□ -1.75
ECM9	YKR004C	YLR352W	Q06479	807 aa		4.12	□□□□□ -1.75
ECM9	YKR004C	CRD1	Q07560	283 aa		4.12	□□□□□ -1.75
ECM9	YKR004C	SLX4	Q12098	748 aa		4.12	□□□□□ -1.75
ECM9	YKR004C	HNM1	P19807	563 aa		4.11	□□□□□ -1.75
ECM9	YKR004C	PHO3	P24031	467 aa		4.11	□□□□□ -1.75
ECM9	YKR004C	TAF5	P38129	798 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 86.5 ms