Protein–RNA interactions for Protein: P32578

SIP1, SNF1 protein kinase subunit beta-1, yeast

Predictions only

Length 815 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	P32578	NSR1	YGR159C	1245 nt		16.44	■□□□□ 0.22
SIP1	P32578	YML009W-B	YML009W-B	477 nt		16.18	■□□□□ 0.18
SIP1	P32578	NOP1	YDL014W	984 nt		15.45	■□□□□ 0.06
SIP1	P32578	MDJ1	YFL016C	1536 nt		15.18	■□□□□ 0.02
SIP1	P32578	YJL027C	YJL027C	417 nt		13.93	□□□□□ -0.18
SIP1	P32578	YKL036C	YKL036C	393 nt		13.93	□□□□□ -0.18
SIP1	P32578	SSA3	YBL075C	1950 nt		13.79	□□□□□ -0.2
SIP1	P32578	SRX1	YKL086W	384 nt		13.49	□□□□□ -0.25
SIP1	P32578	Q0297	Q0297	156 nt		13.33	□□□□□ -0.28
SIP1	P32578	DBP2	YNL112W	1641 nt		13.17	□□□□□ -0.3
SIP1	P32578	YBR190W	YBR190W	312 nt		13.01	□□□□□ -0.33
SIP1	P32578	YCR051W	YCR051W	669 nt		12.83	□□□□□ -0.36
SIP1	P32578	RTC3	YHR087W	336 nt		12.78	□□□□□ -0.36
SIP1	P32578	SCS3	YGL126W	1143 nt		12.55	□□□□□ -0.4
SIP1	P32578	TRN1	tP(UGG)A	72 nt		12.51	□□□□□ -0.41
SIP1	P32578	SUF9	tP(UGG)F	72 nt		12.51	□□□□□ -0.41
SIP1	P32578	SUF8	tP(UGG)H	72 nt		12.51	□□□□□ -0.41
SIP1	P32578	tP(UGG)L	tP(UGG)L	72 nt		12.51	□□□□□ -0.41
SIP1	P32578	SUF7	tP(UGG)M	72 nt		12.51	□□□□□ -0.41
SIP1	P32578	tP(UGG)N1	tP(UGG)N1	72 nt		12.51	□□□□□ -0.41
SIP1	P32578	tP(UGG)N2	tP(UGG)N2	72 nt		12.51	□□□□□ -0.41
SIP1	P32578	tP(UGG)O1	tP(UGG)O1	72 nt		12.51	□□□□□ -0.41
SIP1	P32578	SUF11	tP(UGG)O2	72 nt		12.51	□□□□□ -0.41
SIP1	P32578	CCC1	YLR220W	969 nt		12.48	□□□□□ -0.41
SIP1	P32578	RVS167	YDR388W	1449 nt		12.28	□□□□□ -0.44
SIP1	P32578	PUT4	YOR348C	1884 nt		12.23	□□□□□ -0.45
SIP1	P32578	SCJ1	YMR214W	1134 nt		12.12	□□□□□ -0.47
SIP1	P32578	YOL085C	YOL085C	342 nt		12.08	□□□□□ -0.48
SIP1	P32578	RPP1B	YDL130W	321 nt		11.98	□□□□□ -0.49
SIP1	P32578	SSA4	YER103W	1929 nt		11.95	□□□□□ -0.5
SIP1	P32578	PKP1	YIL042C	1185 nt		11.92	□□□□□ -0.5
SIP1	P32578	SPT5	YML010W	3192 nt		11.91	□□□□□ -0.5
SIP1	P32578	Q0182	Q0182	405 nt		11.88	□□□□□ -0.51
SIP1	P32578	ARE1	YCR048W	1833 nt		11.86	□□□□□ -0.51
SIP1	P32578	POA1	YBR022W	534 nt		11.85	□□□□□ -0.51
SIP1	P32578	YHR049C-A	YHR049C-A	297 nt		11.74	□□□□□ -0.53
SIP1	P32578	SAH1	YER043C	1350 nt		11.74	□□□□□ -0.53
SIP1	P32578	URN1	YPR152C	1398 nt		11.74	□□□□□ -0.53
SIP1	P32578	SHR5	YOL110W	714 nt		11.7	□□□□□ -0.54
SIP1	P32578	BSC6	YOL137W	1494 nt		11.69	□□□□□ -0.54
SIP1	P32578	tP(UGG)O3	tP(UGG)O3	72 nt		11.68	□□□□□ -0.54
SIP1	P32578	DEP1	YAL013W	1218 nt		11.64	□□□□□ -0.55
SIP1	P32578	OPI9	YLR338W	858 nt		11.63	□□□□□ -0.55
SIP1	P32578	BDF1	YLR399C	2061 nt		11.61	□□□□□ -0.55
SIP1	P32578	PAC11	YDR488C	1602 nt		11.57	□□□□□ -0.56
SIP1	P32578	PET122	YER153C	765 nt		11.55	□□□□□ -0.56
SIP1	P32578	BUD23	YCR047C	828 nt		11.46	□□□□□ -0.57
SIP1	P32578	TAT1	YBR069C	1860 nt		11.44	□□□□□ -0.58
SIP1	P32578	RPN10	YHR200W	807 nt		11.4	□□□□□ -0.58
SIP1	P32578	MOT3	YMR070W	1473 nt		11.38	□□□□□ -0.59
SIP1	P32578	NVJ2	YPR091C	2313 nt		11.36	□□□□□ -0.59
SIP1	P32578	YNL208W	YNL208W	600 nt		11.32	□□□□□ -0.6
SIP1	P32578	PTC2	YER089C	1395 nt		11.29	□□□□□ -0.6
SIP1	P32578	PUN1	YLR414C	792 nt		11.29	□□□□□ -0.6
SIP1	P32578	SCR1	SCR1	522 nt		11.27	□□□□□ -0.61
SIP1	P32578	YDJ1	YNL064C	1230 nt		11.26	□□□□□ -0.61
SIP1	P32578	ATS1	YAL020C	1002 nt		11.21	□□□□□ -0.61
SIP1	P32578	GAR1	YHR089C	618 nt		11.18	□□□□□ -0.62
SIP1	P32578	NAB2	YGL122C	1578 nt		11.17	□□□□□ -0.62
SIP1	P32578	RRN5	YLR141W	1092 nt		11.16	□□□□□ -0.62
SIP1	P32578	YJR018W	YJR018W	363 nt		11.15	□□□□□ -0.62
SIP1	P32578	SSA1	YAL005C	1929 nt		11.13	□□□□□ -0.63
SIP1	P32578	MEP2	YNL142W	1500 nt		11.08	□□□□□ -0.64
SIP1	P32578	FPR4	YLR449W	1179 nt		10.99	□□□□□ -0.65
SIP1	P32578	FIS1	YIL065C	468 nt		10.98	□□□□□ -0.65
SIP1	P32578	DAL1	YIR027C	1383 nt		10.94	□□□□□ -0.66
SIP1	P32578	YER088W-B	YER088W-B	147 nt		10.93	□□□□□ -0.66
SIP1	P32578	FPS1	YLL043W	2010 nt		10.87	□□□□□ -0.67
SIP1	P32578	PHO4	YFR034C	939 nt		10.85	□□□□□ -0.67
SIP1	P32578	YJR120W	YJR120W	351 nt		10.85	□□□□□ -0.67
SIP1	P32578	DCW1	YKL046C	1350 nt		10.85	□□□□□ -0.67
SIP1	P32578	YBR220C	YBR220C	1683 nt		10.84	□□□□□ -0.67
SIP1	P32578	YPS1	YLR120C	1710 nt		10.8	□□□□□ -0.68
SIP1	P32578	TIR1	YER011W	765 nt		10.79	□□□□□ -0.68
SIP1	P32578	RSB1	YOR049C	1065 nt		10.79	□□□□□ -0.68
SIP1	P32578	INM2	YDR287W	879 nt		10.78	□□□□□ -0.68
SIP1	P32578	RPP2B	YDR382W	333 nt		10.78	□□□□□ -0.68
SIP1	P32578	YHR165W-A	YHR165W-A	312 nt		10.76	□□□□□ -0.69
SIP1	P32578	YMR090W	YMR090W	684 nt		10.71	□□□□□ -0.69
SIP1	P32578	PCH2	YBR186W	1695 nt		10.71	□□□□□ -0.69
SIP1	P32578	EMI2	YDR516C	1503 nt		10.69	□□□□□ -0.7
SIP1	P32578	GUT2	YIL155C	1950 nt		10.69	□□□□□ -0.7
SIP1	P32578	YDR095C	YDR095C	411 nt		10.64	□□□□□ -0.71
SIP1	P32578	YBL100C	YBL100C	315 nt		10.64	□□□□□ -0.71
SIP1	P32578	YJL225C	YJL225C	5277 nt		10.62	□□□□□ -0.71
SIP1	P32578	SEC11	YIR022W	504 nt		10.62	□□□□□ -0.71
SIP1	P32578	SDH1	YKL148C	1923 nt		10.6	□□□□□ -0.71
SIP1	P32578	YDL221W	YDL221W	552 nt		10.55	□□□□□ -0.72
SIP1	P32578	UME6	YDR207C	2511 nt		10.52	□□□□□ -0.72
SIP1	P32578	SRB2	YHR041C	633 nt		10.52	□□□□□ -0.73
SIP1	P32578	CAC2	YML102W	1407 nt		10.51	□□□□□ -0.73
SIP1	P32578	PIB2	YGL023C	1908 nt		10.5	□□□□□ -0.73
SIP1	P32578	FUN26	YAL022C	1554 nt		10.49	□□□□□ -0.73
SIP1	P32578	ALF1	YNL148C	765 nt		10.47	□□□□□ -0.73
SIP1	P32578	PTP1	YDL230W	1008 nt		10.46	□□□□□ -0.73
SIP1	P32578	BDH2	YAL061W	1254 nt		10.46	□□□□□ -0.73
SIP1	P32578	RPP2A	YOL039W	321 nt		10.45	□□□□□ -0.74
SIP1	P32578	PST2	YDR032C	597 nt		10.42	□□□□□ -0.74
SIP1	P32578	SCC4	YER147C	1875 nt		10.38	□□□□□ -0.75
SIP1	P32578	TRM9	YML014W	840 nt		10.37	□□□□□ -0.75

Retrieved 100 of 7,029 protein–RNA pairs in 85.7 ms