RNA–Protein interactions for RNA: YKR004C

ECM9, Transcript of Non-essential protein of unknown function, yeastyeast

Gene ECM9, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM9YKR004C MTC1P47018 478 aaKnown RBP19.22■□□□□ 0.67
ECM9YKR004C DRS1P32892 752 aaKnown RBP17.76■□□□□ 0.43
ECM9YKR004C FAP1P53971 965 aa17.49■□□□□ 0.39
ECM9YKR004C PRY3P47033 881 aa16.44■□□□□ 0.22
ECM9YKR004C PRI1P10363 409 aa16.3■□□□□ 0.2
ECM9YKR004C AAD16Q02895 342 aa16.22■□□□□ 0.19
ECM9YKR004C ISW2Q08773 1120 aa15.97■□□□□ 0.15
ECM9YKR004C RPG1P38249 964 aaKnown RBP15.79■□□□□ 0.12
ECM9YKR004C DIP2Q12220 943 aaPredicted RBP15.64■□□□□ 0.09
ECM9YKR004C YCK3P39962 524 aa15.52■□□□□ 0.08
ECM9YKR004C HAA1Q12753 694 aaKnown RBP15.43■□□□□ 0.06
ECM9YKR004C TSR3Q12094 313 aaKnown RBP15.4■□□□□ 0.06
ECM9YKR004C RSE1Q04693 1361 aaKnown RBP15.17■□□□□ 0.02
ECM9YKR004C AVT3P36062 692 aa15.03■□□□□ -0
ECM9YKR004C MRPL32P25348 183 aa14.79□□□□□ -0.04
ECM9YKR004C RPL17AP05740 184 aaKnown RBP14.7□□□□□ -0.06
ECM9YKR004C RPL17BP46990 184 aaKnown RBP14.7□□□□□ -0.06
ECM9YKR004C BFR2Q06631 534 aaKnown RBP14.68□□□□□ -0.06
ECM9YKR004C REB1P21538 810 aa14.65□□□□□ -0.06
ECM9YKR004C YGL015CP33199 130 aa14.23□□□□□ -0.13
ECM9YKR004C SPT21P35209 758 aa14.07□□□□□ -0.16
ECM9YKR004C CDC27P38042 758 aa14.02□□□□□ -0.17
ECM9YKR004C YKR023WP36119 530 aaKnown RBP13.94□□□□□ -0.18
ECM9YKR004C UBP10P53874 792 aaPredicted RBP13.67□□□□□ -0.22
ECM9YKR004C TFC8Q12308 588 aa13.66□□□□□ -0.22
ECM9YKR004C HOP09932 586 aa13.65□□□□□ -0.22
ECM9YKR004C MAP2P38174 421 aaKnown RBP13.61□□□□□ -0.23
ECM9YKR004C DCD1P06773 312 aa13.59□□□□□ -0.23
ECM9YKR004C RIM101P33400 625 aa13.53□□□□□ -0.24
ECM9YKR004C SCY1P53009 804 aa13.31□□□□□ -0.28
ECM9YKR004C BCH2P36122 765 aa13.2□□□□□ -0.3
ECM9YKR004C SLX5P32828 619 aaKnown RBP13.15□□□□□ -0.3
ECM9YKR004C BUD31P25337 157 aaPredicted RBP13.13□□□□□ -0.31
ECM9YKR004C TIF4632P39936 914 aaKnown RBP13.1□□□□□ -0.31
ECM9YKR004C OXP1P28273 1286 aa13.06□□□□□ -0.32
ECM9YKR004C TGL3P40308 642 aa13.04□□□□□ -0.32
ECM9YKR004C PTP3P40048 928 aa12.88□□□□□ -0.35
ECM9YKR004C YIL055CP40523 627 aaKnown RBP12.87□□□□□ -0.35
ECM9YKR004C EPS1P40557 701 aa12.87□□□□□ -0.35
ECM9YKR004C BDF1P35817 686 aa12.82□□□□□ -0.36
ECM9YKR004C TFA1P36100 482 aa12.77□□□□□ -0.37
ECM9YKR004C UBP9P39967 754 aa12.7□□□□□ -0.38
ECM9YKR004C RSM7P47150 247 aa12.69□□□□□ -0.38
ECM9YKR004C YAH1Q12184 172 aaKnown RBP12.65□□□□□ -0.38
ECM9YKR004C BBC1P47068 1157 aa12.62□□□□□ -0.39
ECM9YKR004C AI2P03876 854 aa12.59□□□□□ -0.39
ECM9YKR004C SIS1P25294 352 aaKnown RBP12.48□□□□□ -0.41
ECM9YKR004C MST1P07236 462 aa12.47□□□□□ -0.41
ECM9YKR004C NSR1P27476 414 aaKnown RBP RIP-Chip data12.44□□□□□ -0.42not detected
ECM9YKR004C YLR271WQ06152 274 aa12.44□□□□□ -0.42
ECM9YKR004C YOR238WQ08634 303 aa12.43□□□□□ -0.42
ECM9YKR004C YAP5P40574 245 aa12.33□□□□□ -0.44
ECM9YKR004C YBL029C-AQ3E756 94 aa12.3□□□□□ -0.44
ECM9YKR004C PSD2P53037 1138 aaKnown RBP12.29□□□□□ -0.44
ECM9YKR004C SSP1P38871 571 aa12.24□□□□□ -0.45
ECM9YKR004C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.19□□□□□ -0.46not detected
ECM9YKR004C VNX1P42839 908 aa12.16□□□□□ -0.46
ECM9YKR004C MRM1P25270 412 aa12.13□□□□□ -0.47
ECM9YKR004C WSC3Q12215 556 aa12.09□□□□□ -0.47
ECM9YKR004C GTT3P39996 337 aa12.06□□□□□ -0.48
ECM9YKR004C SPP1Q03012 353 aa12.06□□□□□ -0.48
ECM9YKR004C PIB1Q06651 286 aa12□□□□□ -0.49
ECM9YKR004C CST9Q06032 482 aa11.99□□□□□ -0.49
ECM9YKR004C MGA2P40578 1113 aa11.97□□□□□ -0.49
ECM9YKR004C TIF11P38912 153 aaKnown RBP11.95□□□□□ -0.5
ECM9YKR004C YMR1P47147 688 aaKnown RBP RIP-Chip data11.86□□□□□ -0.51not detected
ECM9YKR004C RTG3P38165 486 aa11.85□□□□□ -0.51
ECM9YKR004C VPS29P38759 282 aa11.85□□□□□ -0.51
ECM9YKR004C FKH1P40466 484 aa11.81□□□□□ -0.52
ECM9YKR004C DBP1P24784 617 aaKnown RBP11.8□□□□□ -0.52
ECM9YKR004C ULI1P43604 169 aa11.79□□□□□ -0.52
ECM9YKR004C AIR2Q12476 344 aaKnown RBP11.79□□□□□ -0.52
ECM9YKR004C MSB4Q12317 492 aa11.77□□□□□ -0.53
ECM9YKR004C YFR006WP43590 535 aa11.76□□□□□ -0.53
ECM9YKR004C IOC2Q12072 812 aa11.76□□□□□ -0.53
ECM9YKR004C LDB19Q12502 818 aa11.76□□□□□ -0.53
ECM9YKR004C STS1P38637 319 aa11.74□□□□□ -0.53
ECM9YKR004C RCR1P38212 213 aa11.73□□□□□ -0.53
ECM9YKR004C YOL036WQ08206 761 aa11.72□□□□□ -0.53
ECM9YKR004C EAP1P36041 632 aaKnown RBP11.7□□□□□ -0.54
ECM9YKR004C VMA1P17255 1071 aaKnown RBP11.69□□□□□ -0.54
ECM9YKR004C SET4P42948 560 aa11.69□□□□□ -0.54
ECM9YKR004C YJL171CP46992 396 aa11.69□□□□□ -0.54
ECM9YKR004C SAM3Q08986 587 aa11.63□□□□□ -0.55
ECM9YKR004C TRP5P00931 707 aaKnown RBP11.61□□□□□ -0.55
ECM9YKR004C RTG1P32607 177 aa11.55□□□□□ -0.56
ECM9YKR004C BMT6Q12291 365 aa11.54□□□□□ -0.56
ECM9YKR004C YNL035CP53962 389 aaKnown RBP11.5□□□□□ -0.57
ECM9YKR004C NCR1Q12200 1170 aa11.47□□□□□ -0.57
ECM9YKR004C ABP1P15891 592 aaKnown RBP11.45□□□□□ -0.58
ECM9YKR004C SEC61P32915 480 aa11.45□□□□□ -0.58
ECM9YKR004C GYP5Q12344 894 aa11.45□□□□□ -0.58
ECM9YKR004C HTA1P04911 132 aaKnown RBP11.37□□□□□ -0.59
ECM9YKR004C HTA2P04912 132 aa11.37□□□□□ -0.59
ECM9YKR004C DCW1P36091 449 aa11.36□□□□□ -0.59
ECM9YKR004C JIP4Q03361 876 aa11.36□□□□□ -0.59
ECM9YKR004C RAM2P29703 316 aa11.35□□□□□ -0.59
ECM9YKR004C DAN4P47179 1161 aa11.35□□□□□ -0.59
ECM9YKR004C MAK11P20484 414 aaKnown RBP11.33□□□□□ -0.6
ECM9YKR004C TFG1P41895 735 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms