Protein–RNA interactions for Protein: P53202

CUL3, Cullin-3, yeastyeast

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUL3P53202 YML009W-BYML009W-B 477 nt22.36■■□□□ 1.17
CUL3P53202 NSR1YGR159C 1245 nt22.06■■□□□ 1.12
CUL3P53202 NOP1YDL014W 984 nt21.79■■□□□ 1.08
CUL3P53202 YKL036CYKL036C 393 nt20.25■□□□□ 0.83
CUL3P53202 MDJ1YFL016C 1536 nt19.47■□□□□ 0.71
CUL3P53202 Q0297Q0297 156 nt19.12■□□□□ 0.65
CUL3P53202 SRX1YKL086W 384 nt19.03■□□□□ 0.64
CUL3P53202 YJL027CYJL027C 417 nt18.94■□□□□ 0.62
CUL3P53202 SCS3YGL126W 1143 nt18.51■□□□□ 0.55
CUL3P53202 YCR051WYCR051W 669 nt18.08■□□□□ 0.48
CUL3P53202 YOL085CYOL085C 342 nt17.53■□□□□ 0.4
CUL3P53202 DBP2YNL112W 1641 nt17.26■□□□□ 0.35
CUL3P53202 PKP1YIL042C 1185 nt17.25■□□□□ 0.35
CUL3P53202 RPP1BYDL130W 321 nt17.16■□□□□ 0.34
CUL3P53202 TRN1tP(UGG)A 72 nt17.13■□□□□ 0.33
CUL3P53202 SUF9tP(UGG)F 72 nt17.13■□□□□ 0.33
CUL3P53202 SUF8tP(UGG)H 72 nt17.13■□□□□ 0.33
CUL3P53202 tP(UGG)LtP(UGG)L 72 nt17.13■□□□□ 0.33
CUL3P53202 SUF7tP(UGG)M 72 nt17.13■□□□□ 0.33
CUL3P53202 tP(UGG)N1tP(UGG)N1 72 nt17.13■□□□□ 0.33
CUL3P53202 tP(UGG)N2tP(UGG)N2 72 nt17.13■□□□□ 0.33
CUL3P53202 tP(UGG)O1tP(UGG)O1 72 nt17.13■□□□□ 0.33
CUL3P53202 SUF11tP(UGG)O2 72 nt17.13■□□□□ 0.33
CUL3P53202 CCC1YLR220W 969 nt16.95■□□□□ 0.3
CUL3P53202 ATS1YAL020C 1002 nt16.59■□□□□ 0.25
CUL3P53202 SCJ1YMR214W 1134 nt16.57■□□□□ 0.24
CUL3P53202 YBR190WYBR190W 312 nt16.54■□□□□ 0.24
CUL3P53202 PET122YER153C 765 nt16.39■□□□□ 0.21
CUL3P53202 RVS167YDR388W 1449 nt16.29■□□□□ 0.2
CUL3P53202 tP(UGG)O3tP(UGG)O3 72 nt16.25■□□□□ 0.19
CUL3P53202 SCR1SCR1 522 nt16.25■□□□□ 0.19
CUL3P53202 RTC3YHR087W 336 nt16.2■□□□□ 0.18
CUL3P53202 RRN5YLR141W 1092 nt15.92■□□□□ 0.14
CUL3P53202 SHR5YOL110W 714 nt15.76■□□□□ 0.11
CUL3P53202 YDJ1YNL064C 1230 nt15.72■□□□□ 0.11
CUL3P53202 RSB1YOR049C 1065 nt15.65■□□□□ 0.1
CUL3P53202 YER088W-BYER088W-B 147 nt15.61■□□□□ 0.09
CUL3P53202 GAR1YHR089C 618 nt15.36■□□□□ 0.05
CUL3P53202 PST2YDR032C 597 nt15.33■□□□□ 0.04
CUL3P53202 DEP1YAL013W 1218 nt15.26■□□□□ 0.03
CUL3P53202 URN1YPR152C 1398 nt15.23■□□□□ 0.03
CUL3P53202 RPN10YHR200W 807 nt15.05■□□□□ -0
CUL3P53202 YNL208WYNL208W 600 nt15.03■□□□□ -0
CUL3P53202 OPI9YLR338W 858 nt14.97□□□□□ -0.01
CUL3P53202 PUT4YOR348C 1884 nt14.89□□□□□ -0.03
CUL3P53202 TIR1YER011W 765 nt14.83□□□□□ -0.04
CUL3P53202 YKL097CYKL097C 411 nt14.83□□□□□ -0.04
CUL3P53202 SAH1YER043C 1350 nt14.83□□□□□ -0.04
CUL3P53202 SHU1YHL006C 453 nt14.68□□□□□ -0.06
CUL3P53202 ARE1YCR048W 1833 nt14.66□□□□□ -0.06
CUL3P53202 SSA1YAL005C 1929 nt14.6□□□□□ -0.07
CUL3P53202 PUN1YLR414C 792 nt14.54□□□□□ -0.08
CUL3P53202 YHR049C-AYHR049C-A 297 nt14.52□□□□□ -0.09
CUL3P53202 YJR018WYJR018W 363 nt14.52□□□□□ -0.09
CUL3P53202 POA1YBR022W 534 nt14.44□□□□□ -0.1
CUL3P53202 SRB2YHR041C 633 nt14.4□□□□□ -0.1
CUL3P53202 YAL037C-BYAL037C-B 975 nt14.4□□□□□ -0.1
CUL3P53202 YJR120WYJR120W 351 nt14.34□□□□□ -0.11
CUL3P53202 PTC2YER089C 1395 nt14.33□□□□□ -0.12
CUL3P53202 RPP2BYDR382W 333 nt14.29□□□□□ -0.12
CUL3P53202 WWM1YFL010C 636 nt14.2□□□□□ -0.14
CUL3P53202 YOR139CYOR139C 393 nt14.2□□□□□ -0.14
CUL3P53202 BUD23YCR047C 828 nt14.19□□□□□ -0.14
CUL3P53202 YGR021WYGR021W 873 nt14.18□□□□□ -0.14
CUL3P53202 HOM6YJR139C 1080 nt14.13□□□□□ -0.15
CUL3P53202 BSC6YOL137W 1494 nt14.12□□□□□ -0.15
CUL3P53202 NAB2YGL122C 1578 nt14.1□□□□□ -0.15
CUL3P53202 MNP1YGL068W 585 nt14.09□□□□□ -0.15
CUL3P53202 NPL3YDR432W 1245 nt14.05□□□□□ -0.16
CUL3P53202 BDH2YAL061W 1254 nt14.02□□□□□ -0.17
CUL3P53202 INM2YDR287W 879 nt13.98□□□□□ -0.17
CUL3P53202 YFL021C-AYFL021C-A 855 nt13.98□□□□□ -0.17
CUL3P53202 DAL1YIR027C 1383 nt13.97□□□□□ -0.17
CUL3P53202 FIS1YIL065C 468 nt13.96□□□□□ -0.17
CUL3P53202 SSA3YBL075C 1950 nt13.95□□□□□ -0.18
CUL3P53202 FPR4YLR449W 1179 nt13.95□□□□□ -0.18
CUL3P53202 RKM5YLR137W 1104 nt13.93□□□□□ -0.18
CUL3P53202 YOL037CYOL037C 354 nt13.93□□□□□ -0.18
CUL3P53202 YBL100CYBL100C 315 nt13.89□□□□□ -0.19
CUL3P53202 LSM3YLR438C-A 270 nt13.86□□□□□ -0.19
CUL3P53202 PHO4YFR034C 939 nt13.84□□□□□ -0.19
CUL3P53202 FUN26YAL022C 1554 nt13.72□□□□□ -0.21
CUL3P53202 TRM9YML014W 840 nt13.72□□□□□ -0.21
CUL3P53202 tM(CAU)CtM(CAU)C 72 nt13.62□□□□□ -0.23
CUL3P53202 IMT4tM(CAU)E 72 nt13.62□□□□□ -0.23
CUL3P53202 IMT3tM(CAU)J3 72 nt13.62□□□□□ -0.23
CUL3P53202 IMT1tM(CAU)O1 72 nt13.62□□□□□ -0.23
CUL3P53202 IMT2tM(CAU)P 72 nt13.62□□□□□ -0.23
CUL3P53202 CCT6YDR188W 1641 nt13.57□□□□□ -0.24
CUL3P53202 YLR281CYLR281C 468 nt13.56□□□□□ -0.24
CUL3P53202 ALF1YNL148C 765 nt13.51□□□□□ -0.25
CUL3P53202 WHI5YOR083W 888 nt13.51□□□□□ -0.25
CUL3P53202 PUS2YGL063W 1113 nt13.49□□□□□ -0.25
CUL3P53202 YPS1YLR120C 1710 nt13.49□□□□□ -0.25
CUL3P53202 YDR095CYDR095C 411 nt13.46□□□□□ -0.25
CUL3P53202 SUF2tP(AGG)C 72 nt13.46□□□□□ -0.25
CUL3P53202 SUF10tP(AGG)N 72 nt13.46□□□□□ -0.25
CUL3P53202 YLR154C-GYLR154C-G 150 nt13.37□□□□□ -0.27
CUL3P53202 YHR165W-AYHR165W-A 312 nt13.36□□□□□ -0.27
CUL3P53202 SIS1YNL007C 1059 nt13.28□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms