RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Gm6040Q4QY32 63 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ighv6-7A0A0A6YWU3 119 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ighv1-12A0A0A6YXJ9 117 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Foxi2Q3I5G5 311 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ptpn13Q64512 2453 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ndufb4Q9CQC7 129 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Tln1P26039 2541 aaKnown RBP11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Col5a1O88207 1838 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Igkv3-3A0A140T8Q0 119 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 P01794 123 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 1700074P13RikQ9D9G7 251 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gm17577J3QNF7 156 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Tm2d1Q99MB3 208 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 CrygdP04342 174 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gm7257D3YX25 99 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Trav9d-3A0A075B695 113 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Cryba4Q9JJV0 196 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 P01793 123 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Cox7a1P56392 80 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 P01789 122 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Msrb3Q8BU85 253 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gp9O88186 177 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gm10762Q9CZN6 115 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gm14137Q8CE97 175 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Q08AU9 97 aa11.22□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Rnf138Q9CQE0 245 aaKnown RBP11.22□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ndufs5Q99LY9 106 aa11.22□□□□□ -0.61
Col7a1-201ENSMUST00000026740 P04942 107 aa11.21□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Reg3bP35230 175 aa11.21□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Atox1O08997 68 aaKnown RBP11.21□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Defb18Q30KP5 85 aa11.21□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Trav7-6A0A075B640 112 aa11.21□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01750 117 aa11.21□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Rspo1Q9Z132 265 aa11.21□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Vpreb1P13372 142 aa11.21□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ramp1Q9WTJ5 148 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Prok1Q14A28 105 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 9530003J23RikQ8BM26 151 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01791 123 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Igkv1-88A0A140T8N1 120 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Luzp4B1AV09 449 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 4930470P17RikQ9D542 155 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Vopp1Q8R1C3 172 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 7420426K07RikQ3UX66 186 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm15128A2ADW8 449 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm15127B1AVZ5 449 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm15107B1B0X0 449 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm10401E9Q3K6 71 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P04945 108 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Trav9-2A0A075B647 113 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Trav9-4A0A0B4J1K2 113 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 NpyP57774 97 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Mapk1ip1lQ8BH93 242 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm17455G3UW87 128 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm17472A0A075B683 117 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm28539A0A087WSL9 92 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm15217A2CG07 155 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01753 117 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Rnf144bQ8BKD6 301 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm19684G3UZ45 117 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Obox8V9GWY9 217 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ighv3-1A0A075B5S6 116 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Mrpl35Q9CQL6 188 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ighv1-11A0A0A6YWI9 117 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Trav12d-3A0A075B6A4 115 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Foxs1Q61574 329 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Klk12B2RVZ0 247 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm26602M0QWA4 95 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Hoxb4P10284 250 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Iglc1A0A0G2JE99 106 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01843 105 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ighv1-53A0A075B5W3 117 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01748 117 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 H2al1mQ9DAD9 105 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Tnfrsf13bQ9ET35 249 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ebi3O35228 228 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Cfap126Q6P8X9 189 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Defb13Q8R2I4 64 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm17521F6QAC8 156 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Defb12Q8K4N3 78 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 CrygcQ61597 174 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 4933414I15RikQ9D4D5 133 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Odf3Q920N1 254 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Setd2E9Q5F9 2537 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Znf706Q9D115 76 aaKnown RBP11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Gm21994F6T2D2 329 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Cd24P24807 76 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Fancd2osQ9D4K4 178 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Igkv2-109A0A075B5K6 120 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Ighv10-1A0A0B4J1J6 119 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Trav9n-2A0A0G2JDP3 113 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Igf1P05017 153 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Apoc4Q61268 124 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Nxph4G3X9N5 304 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Igkv8-30A0A140T8M3 121 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Rpl39lQ9CQD0 51 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Gphb5Q812B2 130 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Ighv1-61P01749 117 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 P84750 121 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 C920008G01RikA0A0B4J1N1 112 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 69 ms