Protein–RNA interactions for Protein: A0A0A6YWU3

Ighv6-7, Immunoglobulin heavy variable V6-7 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-7A0A0A6YWU3 Gm25239-201ENSMUST00000174915 86 ntBASIC27.01■■□□□ 1.91
Ighv6-7A0A0A6YWU3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ighv6-7A0A0A6YWU3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ighv6-7A0A0A6YWU3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ighv6-7A0A0A6YWU3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ighv6-7A0A0A6YWU3 Gm15042-201ENSMUST00000120212 883 ntBASIC23.75■■□□□ 1.39
Ighv6-7A0A0A6YWU3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ighv6-7A0A0A6YWU3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Ighv6-7A0A0A6YWU3 Gm24109-201ENSMUST00000175489 103 ntBASIC23.32■■□□□ 1.32
Ighv6-7A0A0A6YWU3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ighv6-7A0A0A6YWU3 Psd-208ENSMUST00000224556 2034 ntBASIC23.25■■□□□ 1.31
Ighv6-7A0A0A6YWU3 Gm15045-201ENSMUST00000117359 883 ntBASIC23.16■■□□□ 1.3
Ighv6-7A0A0A6YWU3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ighv6-7A0A0A6YWU3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ighv6-7A0A0A6YWU3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ighv6-7A0A0A6YWU3 Gm23366-201ENSMUST00000175022 89 ntBASIC22.65■■□□□ 1.22
Ighv6-7A0A0A6YWU3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv6-7A0A0A6YWU3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ighv6-7A0A0A6YWU3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv6-7A0A0A6YWU3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv6-7A0A0A6YWU3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv6-7A0A0A6YWU3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ighv6-7A0A0A6YWU3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ighv6-7A0A0A6YWU3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.06■■□□□ 1.12
Ighv6-7A0A0A6YWU3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Ighv6-7A0A0A6YWU3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ighv6-7A0A0A6YWU3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ighv6-7A0A0A6YWU3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ighv6-7A0A0A6YWU3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv6-7A0A0A6YWU3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ighv6-7A0A0A6YWU3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv6-7A0A0A6YWU3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv6-7A0A0A6YWU3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.76■■□□□ 1.07
Ighv6-7A0A0A6YWU3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv6-7A0A0A6YWU3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ighv6-7A0A0A6YWU3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ighv6-7A0A0A6YWU3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv6-7A0A0A6YWU3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ighv6-7A0A0A6YWU3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.59■■□□□ 1.05
Ighv6-7A0A0A6YWU3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.56■■□□□ 1.04
Ighv6-7A0A0A6YWU3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Ighv6-7A0A0A6YWU3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv6-7A0A0A6YWU3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv6-7A0A0A6YWU3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv6-7A0A0A6YWU3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv6-7A0A0A6YWU3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ighv6-7A0A0A6YWU3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv6-7A0A0A6YWU3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv6-7A0A0A6YWU3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.36■■□□□ 1.01
Ighv6-7A0A0A6YWU3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv6-7A0A0A6YWU3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.27■□□□□ 0.99
Ighv6-7A0A0A6YWU3 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.27■□□□□ 0.99
Ighv6-7A0A0A6YWU3 Gm25238-201ENSMUST00000174914 89 ntBASIC21.24■□□□□ 0.99
Ighv6-7A0A0A6YWU3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.22■□□□□ 0.99
Ighv6-7A0A0A6YWU3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv6-7A0A0A6YWU3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv6-7A0A0A6YWU3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv6-7A0A0A6YWU3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv6-7A0A0A6YWU3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv6-7A0A0A6YWU3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv6-7A0A0A6YWU3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Ighv6-7A0A0A6YWU3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.93■□□□□ 0.94
Ighv6-7A0A0A6YWU3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.92■□□□□ 0.94
Ighv6-7A0A0A6YWU3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv6-7A0A0A6YWU3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.88■□□□□ 0.93
Ighv6-7A0A0A6YWU3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv6-7A0A0A6YWU3 Gm27325-201ENSMUST00000175467 74 ntBASIC20.81■□□□□ 0.92
Ighv6-7A0A0A6YWU3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv6-7A0A0A6YWU3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv6-7A0A0A6YWU3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ighv6-7A0A0A6YWU3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.73■□□□□ 0.91
Ighv6-7A0A0A6YWU3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv6-7A0A0A6YWU3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.65■□□□□ 0.9
Ighv6-7A0A0A6YWU3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ighv6-7A0A0A6YWU3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ighv6-7A0A0A6YWU3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Ighv6-7A0A0A6YWU3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.59■□□□□ 0.89
Ighv6-7A0A0A6YWU3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv6-7A0A0A6YWU3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv6-7A0A0A6YWU3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Ighv6-7A0A0A6YWU3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ighv6-7A0A0A6YWU3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv6-7A0A0A6YWU3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv6-7A0A0A6YWU3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv6-7A0A0A6YWU3 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.43■□□□□ 0.86
Ighv6-7A0A0A6YWU3 Gm25262-201ENSMUST00000174934 133 ntBASIC20.42■□□□□ 0.86
Ighv6-7A0A0A6YWU3 Rab21-202ENSMUST00000218831 843 ntBASIC20.41■□□□□ 0.86
Ighv6-7A0A0A6YWU3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv6-7A0A0A6YWU3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Ighv6-7A0A0A6YWU3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv6-7A0A0A6YWU3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv6-7A0A0A6YWU3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv6-7A0A0A6YWU3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ighv6-7A0A0A6YWU3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv6-7A0A0A6YWU3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.34■□□□□ 0.85
Ighv6-7A0A0A6YWU3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ighv6-7A0A0A6YWU3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv6-7A0A0A6YWU3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv6-7A0A0A6YWU3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv6-7A0A0A6YWU3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms