RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Rhox8Q6VSS7 320 aa24.5■■□□□ 1.51
Col7a1-201ENSMUST00000026740 Rpgrip1Q9EPQ2 1331 aa23.73■■□□□ 1.39
Col7a1-201ENSMUST00000026740 Cngb1E1AZ71 1325 aa23.49■■□□□ 1.35
Col7a1-201ENSMUST00000026740 Pelp1Q9DBD5 1123 aaKnown RBP23.21■■□□□ 1.31
Col7a1-201ENSMUST00000026740 Las1lA2BE28 776 aaKnown RBP23.13■■□□□ 1.29
Col7a1-201ENSMUST00000026740 Wdr66E9Q743 1299 aa22.25■■□□□ 1.15
Col7a1-201ENSMUST00000026740 Rtl1Q7M732 1744 aa22.21■■□□□ 1.15
Col7a1-201ENSMUST00000026740 Ube2uB1AUC4 352 aa22■■□□□ 1.11
Col7a1-201ENSMUST00000026740 Stra8P70278 393 aa21.85■■□□□ 1.09
Col7a1-201ENSMUST00000026740 Esf1Q3V1V3 845 aaKnown RBP21.81■■□□□ 1.08
Col7a1-201ENSMUST00000026740 Amer1Q7TS75 1132 aa21.74■■□□□ 1.07
Col7a1-201ENSMUST00000026740 Ehmt2Q9Z148 1263 aaKnown RBP21.67■■□□□ 1.06
Col7a1-201ENSMUST00000026740 4930567H17RikQ3V0K5 233 aa21.67■■□□□ 1.06
Col7a1-201ENSMUST00000026740 CenpbP27790 599 aa21.65■■□□□ 1.06
Col7a1-201ENSMUST00000026740 Ccdc180J3QNE4 1664 aa21.62■■□□□ 1.05
Col7a1-201ENSMUST00000026740 Zeb1Q64318 1117 aa21.6■■□□□ 1.05
Col7a1-201ENSMUST00000026740 Trim41Q5NCC3 630 aa21.54■■□□□ 1.04
Col7a1-201ENSMUST00000026740 Npm2Q80W85 207 aa21.5■■□□□ 1.03
Col7a1-201ENSMUST00000026740 Ccdc136Q3TVA9 1136 aa21.36■■□□□ 1.01
Col7a1-201ENSMUST00000026740 NefmP08553 848 aa21.31■■□□□ 1
Col7a1-201ENSMUST00000026740 Myt1Q8CFC2 1127 aa21.29■■□□□ 1
Col7a1-201ENSMUST00000026740 NischQ80TM9 1593 aa21.06■□□□□ 0.96
Col7a1-201ENSMUST00000026740 Gab3Q8BSM5 595 aa21.05■□□□□ 0.96
Col7a1-201ENSMUST00000026740 Myt1lP97500 1187 aa21.04■□□□□ 0.96
Col7a1-201ENSMUST00000026740 Anp32bQ9EST5 272 aaKnown RBP21.03■□□□□ 0.96
Col7a1-201ENSMUST00000026740 NeflP08551 543 aa20.96■□□□□ 0.95
Col7a1-201ENSMUST00000026740 Acin1Q9JIX8 1338 aaKnown RBP20.96■□□□□ 0.95
Col7a1-201ENSMUST00000026740 Tnnt3Q9QZ47 272 aa20.91■□□□□ 0.94
Col7a1-201ENSMUST00000026740 4933416C03RikQ3V063 378 aa20.77■□□□□ 0.92
Col7a1-201ENSMUST00000026740 NrdcQ8BHG1 1161 aa20.75■□□□□ 0.91
Col7a1-201ENSMUST00000026740 Rtl5Q5DTT4 599 aa20.74■□□□□ 0.91
Col7a1-201ENSMUST00000026740 Slc24a1Q91WD8 1130 aa20.71■□□□□ 0.91
Col7a1-201ENSMUST00000026740 Cdk11bP24788 784 aaKnown RBP20.66■□□□□ 0.9
Col7a1-201ENSMUST00000026740 UbtfP25976 765 aaKnown RBP20.63■□□□□ 0.89
Col7a1-201ENSMUST00000026740 Ttbk1Q6PCN3 1308 aa20.6■□□□□ 0.89
Col7a1-201ENSMUST00000026740 HrcG5E8J6 738 aa20.41■□□□□ 0.86
Col7a1-201ENSMUST00000026740 NclP09405 707 aaKnown RBP20.34■□□□□ 0.85
Col7a1-201ENSMUST00000026740 Os9Q8K2C7 672 aa20.31■□□□□ 0.84
Col7a1-201ENSMUST00000026740 Nop58Q6DFW4 536 aaKnown RBP20.26■□□□□ 0.83
Col7a1-201ENSMUST00000026740 Fam50aQ9WV03 339 aaKnown RBP20.16■□□□□ 0.82
Col7a1-201ENSMUST00000026740 Eif5bQ05D44 1216 aaKnown RBP20.07■□□□□ 0.8
Col7a1-201ENSMUST00000026740 Hdac5Q9Z2V6 1113 aa20.06■□□□□ 0.8
Col7a1-201ENSMUST00000026740 TonslQ6NZL6 1363 aa20.05■□□□□ 0.8
Col7a1-201ENSMUST00000026740 Neurod1Q60867 357 aa20.02■□□□□ 0.8
Col7a1-201ENSMUST00000026740 Pcgf6Q99NA9 353 aa19.96■□□□□ 0.79
Col7a1-201ENSMUST00000026740 Il27Q8K3I6 234 aa19.94■□□□□ 0.78
Col7a1-201ENSMUST00000026740 Anp32aO35381 247 aa19.85■□□□□ 0.77
Col7a1-201ENSMUST00000026740 Zcchc6Q5BLK4 1491 aaKnown RBP19.81■□□□□ 0.76
Col7a1-201ENSMUST00000026740 DaxxO35613 739 aa19.79■□□□□ 0.76
Col7a1-201ENSMUST00000026740 Ap3b1Q9Z1T1 1105 aa19.68■□□□□ 0.74
Col7a1-201ENSMUST00000026740 Nlrp6Q91WS2 869 aa19.67■□□□□ 0.74
Col7a1-201ENSMUST00000026740 ClspnQ80YR7 1315 aa19.67■□□□□ 0.74
Col7a1-201ENSMUST00000026740 CatipB9EKE5 520 aa19.64■□□□□ 0.74
Col7a1-201ENSMUST00000026740 Ythdc1E9Q5K9 736 aaKnown RBP19.64■□□□□ 0.74
Col7a1-201ENSMUST00000026740 DiexfQ8BTT6 772 aaKnown RBP19.64■□□□□ 0.74
Col7a1-201ENSMUST00000026740 Gm13697A2AK42 830 aa19.64■□□□□ 0.73
Col7a1-201ENSMUST00000026740 Ccdc9Q8VC31 543 aaKnown RBP19.56■□□□□ 0.72
Col7a1-201ENSMUST00000026740 Upf2A2AT37 1269 aaKnown RBP19.56■□□□□ 0.72
Col7a1-201ENSMUST00000026740 Hsp90aa1P07901 733 aaKnown RBP19.53■□□□□ 0.72
Col7a1-201ENSMUST00000026740 Hnrnpul2Q00PI9 745 aaKnown RBP19.44■□□□□ 0.7
Col7a1-201ENSMUST00000026740 Supt5hO55201 1082 aaKnown RBP19.4■□□□□ 0.7
Col7a1-201ENSMUST00000026740 Ccer2J3QPU5 274 aa19.37■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Npm1Q61937 292 aaKnown RBP19.37■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Gm13695A2AK44 830 aa19.35■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Mier1Q5UAK0 511 aa19.34■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Atp1b4Q99ME6 356 aa19.34■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Polr3glQ8R0C0 218 aa19.31■□□□□ 0.68
Col7a1-201ENSMUST00000026740 Abcc9P70170 1546 aa19.28■□□□□ 0.68
Col7a1-201ENSMUST00000026740 Gm35339A0A140LHH9 1649 aa19.27■□□□□ 0.67
Col7a1-201ENSMUST00000026740 Erich6D3Z6S9 713 aa19.24■□□□□ 0.67
Col7a1-201ENSMUST00000026740 Chic1Q8CBW7 227 aa19.19■□□□□ 0.66
Col7a1-201ENSMUST00000026740 Zbtb7cQ8VCZ7 619 aa19.19■□□□□ 0.66
Col7a1-201ENSMUST00000026740 Trim44Q9QXA7 346 aa19.19■□□□□ 0.66
Col7a1-201ENSMUST00000026740 Brd4Q9ESU6 1400 aaKnown RBP19.17■□□□□ 0.66
Col7a1-201ENSMUST00000026740 Ppargc1bQ8VHJ7 1014 aa19.14■□□□□ 0.65
Col7a1-201ENSMUST00000026740 Adam1bQ8R534 806 aa19.12■□□□□ 0.65
Col7a1-201ENSMUST00000026740 Aplp2Q06335 707 aa19.07■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Znf326O88291 580 aa19.06■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Anks4bQ8K3X6 423 aa19.06■□□□□ 0.64
Col7a1-201ENSMUST00000026740 DekQ7TNV0 380 aaKnown RBP19.05■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Lmod2Q3UHZ5 550 aa19.05■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Clstn2Q9ER65 966 aa19.05■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Plekhg3Q4VAC9 1341 aa19.04■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Calr4Q3TQS0 420 aa19.04■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Dcaf1Q80TR8 1506 aa19.04■□□□□ 0.64
Col7a1-201ENSMUST00000026740 ArxO35085 564 aa19.04■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Fgd1P52734 960 aa18.97■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Lmod3E9QA62 571 aa18.97■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Clip1Q922J3 1391 aa18.96■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Htatsf1Q8BGC0 757 aa18.96■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Wdr43Q6ZQL4 677 aaKnown RBP18.96■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Cep164Q5DU05 1446 aa18.94■□□□□ 0.62
Col7a1-201ENSMUST00000026740 Ppp4r2Q0VGB7 417 aa18.92■□□□□ 0.62
Col7a1-201ENSMUST00000026740 Chmp4bQ9D8B3 224 aaKnown RBP18.91■□□□□ 0.62
Col7a1-201ENSMUST00000026740 Zbtb4Q5F293 982 aa18.89■□□□□ 0.62
Col7a1-201ENSMUST00000026740 Zfp777B9EKF4 885 aa18.89■□□□□ 0.61
Col7a1-201ENSMUST00000026740 Rb1cc1Q9ESK9 1588 aa18.88■□□□□ 0.61
Col7a1-201ENSMUST00000026740 Prdm10Q3UTQ7 1184 aa18.84■□□□□ 0.61
Col7a1-201ENSMUST00000026740 PnnO35691 725 aaKnown RBP18.83■□□□□ 0.61
Col7a1-201ENSMUST00000026740 PtmaP26350 111 aa18.83■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms