RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Rhox8Q6VSS7 320 aa24,5■■□□□ 1,51
Col7a1-201ENSMUST00000026740 Rpgrip1Q9EPQ2 1331 aa23,73■■□□□ 1,39
Col7a1-201ENSMUST00000026740 Cngb1E1AZ71 1325 aa23,49■■□□□ 1,35
Col7a1-201ENSMUST00000026740 Pelp1Q9DBD5 1123 aaKnown RBP23,21■■□□□ 1,31
Col7a1-201ENSMUST00000026740 Las1lA2BE28 776 aaKnown RBP23,13■■□□□ 1,29
Col7a1-201ENSMUST00000026740 Wdr66E9Q743 1299 aa22,25■■□□□ 1,15
Col7a1-201ENSMUST00000026740 Rtl1Q7M732 1744 aa22,21■■□□□ 1,15
Col7a1-201ENSMUST00000026740 Ube2uB1AUC4 352 aa22■■□□□ 1,11
Col7a1-201ENSMUST00000026740 Stra8P70278 393 aa21,85■■□□□ 1,09
Col7a1-201ENSMUST00000026740 Esf1Q3V1V3 845 aaKnown RBP21,81■■□□□ 1,08
Col7a1-201ENSMUST00000026740 Amer1Q7TS75 1132 aa21,74■■□□□ 1,07
Col7a1-201ENSMUST00000026740 Ehmt2Q9Z148 1263 aaKnown RBP21,67■■□□□ 1,06
Col7a1-201ENSMUST00000026740 4930567H17RikQ3V0K5 233 aa21,67■■□□□ 1,06
Col7a1-201ENSMUST00000026740 CenpbP27790 599 aa21,65■■□□□ 1,06
Col7a1-201ENSMUST00000026740 Ccdc180J3QNE4 1664 aa21,62■■□□□ 1,05
Col7a1-201ENSMUST00000026740 Zeb1Q64318 1117 aa21,6■■□□□ 1,05
Col7a1-201ENSMUST00000026740 Trim41Q5NCC3 630 aa21,54■■□□□ 1,04
Col7a1-201ENSMUST00000026740 Npm2Q80W85 207 aa21,5■■□□□ 1,03
Col7a1-201ENSMUST00000026740 Ccdc136Q3TVA9 1136 aa21,36■■□□□ 1,01
Col7a1-201ENSMUST00000026740 NefmP08553 848 aa21,31■■□□□ 1
Col7a1-201ENSMUST00000026740 Myt1Q8CFC2 1127 aa21,29■■□□□ 1
Col7a1-201ENSMUST00000026740 NischQ80TM9 1593 aa21,06■□□□□ 0,96
Col7a1-201ENSMUST00000026740 Gab3Q8BSM5 595 aa21,05■□□□□ 0,96
Col7a1-201ENSMUST00000026740 Myt1lP97500 1187 aa21,04■□□□□ 0,96
Col7a1-201ENSMUST00000026740 Anp32bQ9EST5 272 aaKnown RBP21,03■□□□□ 0,96
Col7a1-201ENSMUST00000026740 NeflP08551 543 aa20,96■□□□□ 0,95
Col7a1-201ENSMUST00000026740 Acin1Q9JIX8 1338 aaKnown RBP20,96■□□□□ 0,95
Col7a1-201ENSMUST00000026740 Tnnt3Q9QZ47 272 aa20,91■□□□□ 0,94
Col7a1-201ENSMUST00000026740 4933416C03RikQ3V063 378 aa20,77■□□□□ 0,92
Col7a1-201ENSMUST00000026740 NrdcQ8BHG1 1161 aa20,75■□□□□ 0,91
Col7a1-201ENSMUST00000026740 Rtl5Q5DTT4 599 aa20,74■□□□□ 0,91
Col7a1-201ENSMUST00000026740 Slc24a1Q91WD8 1130 aa20,71■□□□□ 0,91
Col7a1-201ENSMUST00000026740 Cdk11bP24788 784 aaKnown RBP20,66■□□□□ 0,9
Col7a1-201ENSMUST00000026740 UbtfP25976 765 aaKnown RBP20,63■□□□□ 0,89
Col7a1-201ENSMUST00000026740 Ttbk1Q6PCN3 1308 aa20,6■□□□□ 0,89
Col7a1-201ENSMUST00000026740 HrcG5E8J6 738 aa20,41■□□□□ 0,86
Col7a1-201ENSMUST00000026740 NclP09405 707 aaKnown RBP20,34■□□□□ 0,85
Col7a1-201ENSMUST00000026740 Os9Q8K2C7 672 aa20,31■□□□□ 0,84
Col7a1-201ENSMUST00000026740 Nop58Q6DFW4 536 aaKnown RBP20,26■□□□□ 0,83
Col7a1-201ENSMUST00000026740 Fam50aQ9WV03 339 aaKnown RBP20,16■□□□□ 0,82
Col7a1-201ENSMUST00000026740 Eif5bQ05D44 1216 aaKnown RBP20,07■□□□□ 0,8
Col7a1-201ENSMUST00000026740 Hdac5Q9Z2V6 1113 aa20,06■□□□□ 0,8
Col7a1-201ENSMUST00000026740 TonslQ6NZL6 1363 aa20,05■□□□□ 0,8
Col7a1-201ENSMUST00000026740 Neurod1Q60867 357 aa20,02■□□□□ 0,8
Col7a1-201ENSMUST00000026740 Pcgf6Q99NA9 353 aa19,96■□□□□ 0,79
Col7a1-201ENSMUST00000026740 Il27Q8K3I6 234 aa19,94■□□□□ 0,78
Col7a1-201ENSMUST00000026740 Anp32aO35381 247 aa19,85■□□□□ 0,77
Col7a1-201ENSMUST00000026740 Zcchc6Q5BLK4 1491 aaKnown RBP19,81■□□□□ 0,76
Col7a1-201ENSMUST00000026740 DaxxO35613 739 aa19,79■□□□□ 0,76
Col7a1-201ENSMUST00000026740 Ap3b1Q9Z1T1 1105 aa19,68■□□□□ 0,74
Col7a1-201ENSMUST00000026740 Nlrp6Q91WS2 869 aa19,67■□□□□ 0,74
Col7a1-201ENSMUST00000026740 ClspnQ80YR7 1315 aa19,67■□□□□ 0,74
Col7a1-201ENSMUST00000026740 CatipB9EKE5 520 aa19,64■□□□□ 0,74
Col7a1-201ENSMUST00000026740 Ythdc1E9Q5K9 736 aaKnown RBP19,64■□□□□ 0,74
Col7a1-201ENSMUST00000026740 DiexfQ8BTT6 772 aaKnown RBP19,64■□□□□ 0,74
Col7a1-201ENSMUST00000026740 Gm13697A2AK42 830 aa19,64■□□□□ 0,73
Col7a1-201ENSMUST00000026740 Ccdc9Q8VC31 543 aaKnown RBP19,56■□□□□ 0,72
Col7a1-201ENSMUST00000026740 Upf2A2AT37 1269 aaKnown RBP19,56■□□□□ 0,72
Col7a1-201ENSMUST00000026740 Hsp90aa1P07901 733 aaKnown RBP19,53■□□□□ 0,72
Col7a1-201ENSMUST00000026740 Hnrnpul2Q00PI9 745 aaKnown RBP19,44■□□□□ 0,7
Col7a1-201ENSMUST00000026740 Supt5hO55201 1082 aaKnown RBP19,4■□□□□ 0,7
Col7a1-201ENSMUST00000026740 Ccer2J3QPU5 274 aa19,37■□□□□ 0,69
Col7a1-201ENSMUST00000026740 Npm1Q61937 292 aaKnown RBP19,37■□□□□ 0,69
Col7a1-201ENSMUST00000026740 Gm13695A2AK44 830 aa19,35■□□□□ 0,69
Col7a1-201ENSMUST00000026740 Mier1Q5UAK0 511 aa19,34■□□□□ 0,69
Col7a1-201ENSMUST00000026740 Atp1b4Q99ME6 356 aa19,34■□□□□ 0,69
Col7a1-201ENSMUST00000026740 Polr3glQ8R0C0 218 aa19,31■□□□□ 0,68
Col7a1-201ENSMUST00000026740 Abcc9P70170 1546 aa19,28■□□□□ 0,68
Col7a1-201ENSMUST00000026740 Gm35339A0A140LHH9 1649 aa19,27■□□□□ 0,67
Col7a1-201ENSMUST00000026740 Erich6D3Z6S9 713 aa19,24■□□□□ 0,67
Col7a1-201ENSMUST00000026740 Chic1Q8CBW7 227 aa19,19■□□□□ 0,66
Col7a1-201ENSMUST00000026740 Zbtb7cQ8VCZ7 619 aa19,19■□□□□ 0,66
Col7a1-201ENSMUST00000026740 Trim44Q9QXA7 346 aa19,19■□□□□ 0,66
Col7a1-201ENSMUST00000026740 Brd4Q9ESU6 1400 aaKnown RBP19,17■□□□□ 0,66
Col7a1-201ENSMUST00000026740 Ppargc1bQ8VHJ7 1014 aa19,14■□□□□ 0,65
Col7a1-201ENSMUST00000026740 Adam1bQ8R534 806 aa19,12■□□□□ 0,65
Col7a1-201ENSMUST00000026740 Aplp2Q06335 707 aa19,07■□□□□ 0,64
Col7a1-201ENSMUST00000026740 Znf326O88291 580 aa19,06■□□□□ 0,64
Col7a1-201ENSMUST00000026740 Anks4bQ8K3X6 423 aa19,06■□□□□ 0,64
Col7a1-201ENSMUST00000026740 DekQ7TNV0 380 aaKnown RBP19,05■□□□□ 0,64
Col7a1-201ENSMUST00000026740 Lmod2Q3UHZ5 550 aa19,05■□□□□ 0,64
Col7a1-201ENSMUST00000026740 Clstn2Q9ER65 966 aa19,05■□□□□ 0,64
Col7a1-201ENSMUST00000026740 Plekhg3Q4VAC9 1341 aa19,04■□□□□ 0,64
Col7a1-201ENSMUST00000026740 Calr4Q3TQS0 420 aa19,04■□□□□ 0,64
Col7a1-201ENSMUST00000026740 Dcaf1Q80TR8 1506 aa19,04■□□□□ 0,64
Col7a1-201ENSMUST00000026740 ArxO35085 564 aa19,04■□□□□ 0,64
Col7a1-201ENSMUST00000026740 Fgd1P52734 960 aa18,97■□□□□ 0,63
Col7a1-201ENSMUST00000026740 Lmod3E9QA62 571 aa18,97■□□□□ 0,63
Col7a1-201ENSMUST00000026740 Clip1Q922J3 1391 aa18,96■□□□□ 0,63
Col7a1-201ENSMUST00000026740 Htatsf1Q8BGC0 757 aa18,96■□□□□ 0,63
Col7a1-201ENSMUST00000026740 Wdr43Q6ZQL4 677 aaKnown RBP18,96■□□□□ 0,63
Col7a1-201ENSMUST00000026740 Cep164Q5DU05 1446 aa18,94■□□□□ 0,62
Col7a1-201ENSMUST00000026740 Ppp4r2Q0VGB7 417 aa18,92■□□□□ 0,62
Col7a1-201ENSMUST00000026740 Chmp4bQ9D8B3 224 aaKnown RBP18,91■□□□□ 0,62
Col7a1-201ENSMUST00000026740 Zbtb4Q5F293 982 aa18,89■□□□□ 0,62
Col7a1-201ENSMUST00000026740 Zfp777B9EKF4 885 aa18,89■□□□□ 0,61
Col7a1-201ENSMUST00000026740 Rb1cc1Q9ESK9 1588 aa18,88■□□□□ 0,61
Col7a1-201ENSMUST00000026740 Prdm10Q3UTQ7 1184 aa18,84■□□□□ 0,61
Col7a1-201ENSMUST00000026740 PnnO35691 725 aaKnown RBP18,83■□□□□ 0,61
Col7a1-201ENSMUST00000026740 PtmaP26350 111 aa18,83■□□□□ 0,61
Retrieved 100 of 22,080 RNA–protein pairs in 11,3 ms