RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Odf1Q61999 247 aa12.92□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Trav13n-2A0A0G2JF93 110 aa12.92□□□□□ -0.34
Shroom3-201ENSMUST00000113051 4930470P17RikQ9D542 155 aa12.92□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Ndufc2Q9CQ54 120 aa12.92□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Gm17577J3QNF7 156 aa12.92□□□□□ -0.34
Shroom3-201ENSMUST00000113051 H2al1nQ497L1 109 aa12.92□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Cfap46E9Q2C0 2641 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Igkv3-4A0A140T8Q4 119 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 GhrhP16043 103 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Gm20379A0A087WR34 119 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Gm20708H3BKF4 155 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 CrygdP04342 174 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Prop1P97458 223 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Ifitm1Q9D103 106 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Tomm6Q9CQN3 74 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Gm10638F6QEG2 257 aa12.91□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Cox17P56394 63 aa12.9□□□□□ -0.34
Shroom3-201ENSMUST00000113051 P01837 106 aa12.9□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Rbmy1bQ60990 380 aa12.9□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Trav9n-4A0A075B631 113 aa12.9□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Igkv2-109A0A075B5K6 120 aa12.9□□□□□ -0.34
Shroom3-201ENSMUST00000113051 Foxi3E0CZH3 425 aa12.89□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Gm10542F6XDR3 90 aa12.89□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Spry4Q9WTP2 300 aa12.89□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Zic4Q61467 341 aa12.89□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Sigmar1O55242 223 aa12.89□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Fam110aQ8R184 296 aa12.89□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Ighv8-2A0A0A6YW58 119 aa12.88□□□□□ -0.35
Shroom3-201ENSMUST00000113051 BikO70337 150 aa12.88□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Gata3P23772 443 aa12.88□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Q99M08 65 aa12.88□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Lst1O08843 95 aa12.88□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Map6d1Q14BB9 191 aa12.88□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Igkv3-3A0A140T8Q0 119 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 9530003J23RikQ8BM26 151 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Tnrc6aQ3UHK8 1896 aaKnown RBP12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Arhgap21Q6DFV3 1944 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Pip4p1Q3TWL2 284 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 SbsponQ3UPR9 264 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 4930442H23RikQ9D5G7 103 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Spry2Q9QXV8 315 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Nsun4C4P6S0 806 aaKnown RBP12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Ociad2Q9D8W7 154 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 CadB2RQC6 2225 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 P84751 237 aa12.87□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Spink4O35679 86 aa12.86□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Rbm3O89086 153 aaKnown RBP12.86□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Igkv1-35A0A0G2JDE5 120 aa12.86□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Acyp1P56376 99 aa12.86□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Greb1Q3UHK3 1954 aa12.86□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Wisp2Q9Z0G4 251 aa12.86□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Ighv1-53A0A075B5W3 117 aa12.86□□□□□ -0.35
Shroom3-201ENSMUST00000113051 P01748 117 aa12.86□□□□□ -0.35
Shroom3-201ENSMUST00000113051 9130230L23RikQ8CC80 163 aa12.86□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Col5a3Q9JLI2 1739 aa12.85□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Foxi2Q3I5G5 311 aa12.85□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Gp9O88186 177 aa12.85□□□□□ -0.35
Shroom3-201ENSMUST00000113051 P04940 107 aa12.85□□□□□ -0.35
Shroom3-201ENSMUST00000113051 P04941 107 aa12.85□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Anapc1P53995 1944 aaKnown RBP12.85□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Ncor1Q60974 2453 aa12.85□□□□□ -0.35
Shroom3-201ENSMUST00000113051 AtrxQ61687 2476 aaKnown RBP12.85□□□□□ -0.35
Shroom3-201ENSMUST00000113051 AvpP35455 168 aa12.85□□□□□ -0.35
Shroom3-201ENSMUST00000113051 Q8C708 225 aa12.84□□□□□ -0.35
Shroom3-201ENSMUST00000113051 C920008G01RikA0A0B4J1N1 112 aa12.83□□□□□ -0.36
Shroom3-201ENSMUST00000113051 P01747 120 aa12.83□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Fam19a1Q7TPG8 133 aa12.83□□□□□ -0.36
Shroom3-201ENSMUST00000113051 9930022D16RikQ8BG27 128 aa12.83□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Arfgef3Q3UGY8 2170 aa12.83□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Abca4O35600 2310 aa12.83□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Plscr4P58196 326 aa12.83□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Fam19a4Q7TPG5 135 aa12.82□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Mrpl35Q9CQL6 188 aa12.82□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Gm10647E9Q8X0 124 aa12.82□□□□□ -0.36
Shroom3-201ENSMUST00000113051 1500011B03RikQ3TTH7 73 aa12.82□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Egr2P08152 470 aa12.82□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Ly6c2P0CW03 131 aa12.81□□□□□ -0.36
Shroom3-201ENSMUST00000113051 2010109I03RikQ9CQ11 111 aa12.81□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Ighv1-62-1A0A075B5U3 116 aa12.8□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Usf3B2RUQ2 2221 aa12.8□□□□□ -0.36
Shroom3-201ENSMUST00000113051 CenpeQ6RT24 2474 aaKnown RBP12.8□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Igkv4-92A0A0B4J1I2 117 aa12.8□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Tmem243B2RVB9 118 aa12.8□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Glrp1E9Q9S8 174 aa12.8□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Trav4n-4A0A075B615 110 aa12.8□□□□□ -0.36
Shroom3-201ENSMUST00000113051 P01630 113 aa12.8□□□□□ -0.36
Shroom3-201ENSMUST00000113051 BB014433Q8C5R5 389 aa12.79□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Trav6n-6A0A075B6B2 114 aa12.79□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Gphb5Q812B2 130 aa12.78□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Gm9936Q8C864 160 aa12.78□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Sptan1P16546 2472 aaKnown RBP12.77□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Col6a6Q8C6K9 2265 aa12.77□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Fgf6P21658 208 aa12.77□□□□□ -0.36
Shroom3-201ENSMUST00000113051 Gm37389A0A0A6YW05 95 aa12.77□□□□□ -0.37
Shroom3-201ENSMUST00000113051 Wipf1Q8K1I7 493 aa12.77□□□□□ -0.37
Shroom3-201ENSMUST00000113051 P04942 107 aa12.77□□□□□ -0.37
Shroom3-201ENSMUST00000113051 Ighv1-62-2A0A0A6YXZ4 119 aa12.76□□□□□ -0.37
Shroom3-201ENSMUST00000113051 PkdrejQ9Z0T6 2126 aa12.76□□□□□ -0.37
Shroom3-201ENSMUST00000113051 Rspo3Q2TJ95 277 aa12.76□□□□□ -0.37
Shroom3-201ENSMUST00000113051 Crip1P63254 77 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms