RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Rhox8Q6VSS7 320 aa30.18■■■□□ 2.42
Shroom3-201ENSMUST00000113051 Ehmt2Q9Z148 1263 aaKnown RBP27.47■■□□□ 1.99
Shroom3-201ENSMUST00000113051 Esf1Q3V1V3 845 aaKnown RBP26.77■■□□□ 1.88
Shroom3-201ENSMUST00000113051 Cngb1E1AZ71 1325 aa26.77■■□□□ 1.88
Shroom3-201ENSMUST00000113051 Ccdc136Q3TVA9 1136 aa26.75■■□□□ 1.87
Shroom3-201ENSMUST00000113051 Ube2uB1AUC4 352 aa26.73■■□□□ 1.87
Shroom3-201ENSMUST00000113051 Zeb1Q64318 1117 aa26.52■■□□□ 1.84
Shroom3-201ENSMUST00000113051 Wdr66E9Q743 1299 aa26.5■■□□□ 1.83
Shroom3-201ENSMUST00000113051 Gab3Q8BSM5 595 aa26.42■■□□□ 1.82
Shroom3-201ENSMUST00000113051 Npm2Q80W85 207 aa26.2■■□□□ 1.79
Shroom3-201ENSMUST00000113051 Las1lA2BE28 776 aaKnown RBP26.1■■□□□ 1.77
Shroom3-201ENSMUST00000113051 Myt1lP97500 1187 aa26.1■■□□□ 1.77
Shroom3-201ENSMUST00000113051 Rpgrip1Q9EPQ2 1331 aa25.98■■□□□ 1.75
Shroom3-201ENSMUST00000113051 Trim41Q5NCC3 630 aa25.52■■□□□ 1.68
Shroom3-201ENSMUST00000113051 Pelp1Q9DBD5 1123 aaKnown RBP25.45■■□□□ 1.67
Shroom3-201ENSMUST00000113051 Slc24a1Q91WD8 1130 aa25.39■■□□□ 1.65
Shroom3-201ENSMUST00000113051 UbtfP25976 765 aaKnown RBP25.31■■□□□ 1.64
Shroom3-201ENSMUST00000113051 Il27Q8K3I6 234 aa25.27■■□□□ 1.64
Shroom3-201ENSMUST00000113051 Amer1Q7TS75 1132 aa25.04■■□□□ 1.6
Shroom3-201ENSMUST00000113051 Ap3b1Q9Z1T1 1105 aa24.95■■□□□ 1.58
Shroom3-201ENSMUST00000113051 NischQ80TM9 1593 aa24.84■■□□□ 1.57
Shroom3-201ENSMUST00000113051 Neurod1Q60867 357 aa24.83■■□□□ 1.57
Shroom3-201ENSMUST00000113051 Os9Q8K2C7 672 aa24.67■■□□□ 1.54
Shroom3-201ENSMUST00000113051 Fam50aQ9WV03 339 aaKnown RBP24.61■■□□□ 1.53
Shroom3-201ENSMUST00000113051 Ppargc1bQ8VHJ7 1014 aa24.57■■□□□ 1.52
Shroom3-201ENSMUST00000113051 Ttbk1Q6PCN3 1308 aa24.5■■□□□ 1.51
Shroom3-201ENSMUST00000113051 Zbtb7cQ8VCZ7 619 aa24.5■■□□□ 1.51
Shroom3-201ENSMUST00000113051 Eif5bQ05D44 1216 aaKnown RBP24.41■■□□□ 1.5
Shroom3-201ENSMUST00000113051 CenpbP27790 599 aa24.41■■□□□ 1.5
Shroom3-201ENSMUST00000113051 Gm35339A0A140LHH9 1649 aa24.4■■□□□ 1.5
Shroom3-201ENSMUST00000113051 Ifnlr1Q8CGK5 535 aa24.39■■□□□ 1.5
Shroom3-201ENSMUST00000113051 Stra8P70278 393 aa24.35■■□□□ 1.49
Shroom3-201ENSMUST00000113051 NefmP08553 848 aa24.35■■□□□ 1.49
Shroom3-201ENSMUST00000113051 Chic1Q8CBW7 227 aa24.29■■□□□ 1.48
Shroom3-201ENSMUST00000113051 Acin1Q9JIX8 1338 aaKnown RBP24.29■■□□□ 1.48
Shroom3-201ENSMUST00000113051 HrcG5E8J6 738 aa24.28■■□□□ 1.48
Shroom3-201ENSMUST00000113051 Abcc9P70170 1546 aa24.27■■□□□ 1.48
Shroom3-201ENSMUST00000113051 NclP09405 707 aaKnown RBP24.27■■□□□ 1.48
Shroom3-201ENSMUST00000113051 NrdcQ8BHG1 1161 aa24.22■■□□□ 1.47
Shroom3-201ENSMUST00000113051 Plppr3Q7TPB0 716 aa24.15■■□□□ 1.46
Shroom3-201ENSMUST00000113051 Zcchc6Q5BLK4 1491 aaKnown RBP24.13■■□□□ 1.45
Shroom3-201ENSMUST00000113051 Gm13697A2AK42 830 aa24.12■■□□□ 1.45
Shroom3-201ENSMUST00000113051 Anp32bQ9EST5 272 aaKnown RBP24.08■■□□□ 1.45
Shroom3-201ENSMUST00000113051 Zbtb4Q5F293 982 aa24.07■■□□□ 1.44
Shroom3-201ENSMUST00000113051 Hnrnpul2Q00PI9 745 aaKnown RBP24.04■■□□□ 1.44
Shroom3-201ENSMUST00000113051 4933416C03RikQ3V063 378 aa24.04■■□□□ 1.44
Shroom3-201ENSMUST00000113051 NeflP08551 543 aa23.99■■□□□ 1.43
Shroom3-201ENSMUST00000113051 Cdk11bP24788 784 aaKnown RBP23.99■■□□□ 1.43
Shroom3-201ENSMUST00000113051 Lmod2Q3UHZ5 550 aa23.97■■□□□ 1.43
Shroom3-201ENSMUST00000113051 Prdm10Q3UTQ7 1184 aa23.94■■□□□ 1.42
Shroom3-201ENSMUST00000113051 Atp1b4Q99ME6 356 aa23.9■■□□□ 1.42
Shroom3-201ENSMUST00000113051 Erich6D3Z6S9 713 aa23.85■■□□□ 1.41
Shroom3-201ENSMUST00000113051 4930567H17RikQ3V0K5 233 aa23.77■■□□□ 1.4
Shroom3-201ENSMUST00000113051 Fkbp15Q6P9Q6 1216 aaKnown RBP23.76■■□□□ 1.39
Shroom3-201ENSMUST00000113051 Npm1Q61937 292 aaKnown RBP23.73■■□□□ 1.39
Shroom3-201ENSMUST00000113051 Nop58Q6DFW4 536 aaKnown RBP23.73■■□□□ 1.39
Shroom3-201ENSMUST00000113051 Ccdc180J3QNE4 1664 aa23.66■■□□□ 1.38
Shroom3-201ENSMUST00000113051 TonslQ6NZL6 1363 aa23.65■■□□□ 1.38
Shroom3-201ENSMUST00000113051 Plekhg3Q4VAC9 1341 aa23.64■■□□□ 1.38
Shroom3-201ENSMUST00000113051 Gm13695A2AK44 830 aa23.63■■□□□ 1.37
Shroom3-201ENSMUST00000113051 Mapk8ip2Q9ERE9 830 aa23.57■■□□□ 1.36
Shroom3-201ENSMUST00000113051 Polr3glQ8R0C0 218 aa23.56■■□□□ 1.36
Shroom3-201ENSMUST00000113051 Pcgf6Q99NA9 353 aa23.53■■□□□ 1.36
Shroom3-201ENSMUST00000113051 Mier1Q5UAK0 511 aa23.46■■□□□ 1.35
Shroom3-201ENSMUST00000113051 Rangap1P46061 589 aaKnown RBP23.45■■□□□ 1.34
Shroom3-201ENSMUST00000113051 Nlrp6Q91WS2 869 aa23.45■■□□□ 1.34
Shroom3-201ENSMUST00000113051 Supt5hO55201 1082 aaKnown RBP23.44■■□□□ 1.34
Shroom3-201ENSMUST00000113051 Tnnt3Q9QZ47 272 aa23.42■■□□□ 1.34
Shroom3-201ENSMUST00000113051 ArxO35085 564 aa23.41■■□□□ 1.34
Shroom3-201ENSMUST00000113051 Eid3Q3V124 375 aa23.21■■□□□ 1.31
Shroom3-201ENSMUST00000113051 DiexfQ8BTT6 772 aaKnown RBP23.19■■□□□ 1.3
Shroom3-201ENSMUST00000113051 Rtl1Q7M732 1744 aa23.17■■□□□ 1.3
Shroom3-201ENSMUST00000113051 Csrnp3P59055 597 aa23.16■■□□□ 1.3
Shroom3-201ENSMUST00000113051 Safb2Q80YR5 991 aaKnown RBP23.06■■□□□ 1.28
Shroom3-201ENSMUST00000113051 Gm38655A0A286YDK6 273 aa23.04■■□□□ 1.28
Shroom3-201ENSMUST00000113051 DaxxO35613 739 aa22.99■■□□□ 1.27
Shroom3-201ENSMUST00000113051 P3h3Q8CG70 732 aa22.98■■□□□ 1.27
Shroom3-201ENSMUST00000113051 Ubl4bQ9CQ84 188 aa22.94■■□□□ 1.26
Shroom3-201ENSMUST00000113051 Chic2Q9D9G3 165 aa22.93■■□□□ 1.26
Shroom3-201ENSMUST00000113051 Rad21Q61550 635 aaKnown RBP22.88■■□□□ 1.25
Shroom3-201ENSMUST00000113051 Irx6Q9ER75 438 aa22.87■■□□□ 1.25
Shroom3-201ENSMUST00000113051 Myt1Q8CFC2 1127 aa22.79■■□□□ 1.24
Shroom3-201ENSMUST00000113051 ClspnQ80YR7 1315 aa22.76■■□□□ 1.23
Shroom3-201ENSMUST00000113051 Trim26Q99PN3 545 aa22.75■■□□□ 1.23
Shroom3-201ENSMUST00000113051 Clip1Q922J3 1391 aa22.74■■□□□ 1.23
Shroom3-201ENSMUST00000113051 Vsig10D3YX43 558 aa22.64■■□□□ 1.21
Shroom3-201ENSMUST00000113051 Anp32aO35381 247 aa22.62■■□□□ 1.21
Shroom3-201ENSMUST00000113051 Ythdc1E9Q5K9 736 aaKnown RBP22.6■■□□□ 1.21
Shroom3-201ENSMUST00000113051 Hdac5Q9Z2V6 1113 aa22.57■■□□□ 1.2
Shroom3-201ENSMUST00000113051 MyclP10166 368 aa22.54■■□□□ 1.2
Shroom3-201ENSMUST00000113051 Fgd1P52734 960 aa22.51■■□□□ 1.19
Shroom3-201ENSMUST00000113051 Rtl5Q5DTT4 599 aa22.49■■□□□ 1.19
Shroom3-201ENSMUST00000113051 NgefQ8CHT1 710 aa22.48■■□□□ 1.19
Shroom3-201ENSMUST00000113051 Rtn4Q99P72 1162 aaKnown RBP22.47■■□□□ 1.19
Shroom3-201ENSMUST00000113051 CatipB9EKE5 520 aa22.46■■□□□ 1.19
Shroom3-201ENSMUST00000113051 Ppp4r2Q0VGB7 417 aa22.44■■□□□ 1.18
Shroom3-201ENSMUST00000113051 Hsp90aa1P07901 733 aaKnown RBP22.44■■□□□ 1.18
Shroom3-201ENSMUST00000113051 DekQ7TNV0 380 aaKnown RBP22.4■■□□□ 1.18
Shroom3-201ENSMUST00000113051 Rgl3Q3UYI5 709 aa22.4■■□□□ 1.18
Shroom3-201ENSMUST00000113051 Kdm2aP59997 1161 aa22.39■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms