Protein–RNA interactions for Protein: E0CZH3

Foxi3, Forkhead box I3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxi3E0CZH3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Foxi3E0CZH3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Foxi3E0CZH3 Gm25239-201ENSMUST00000174915 86 ntBASIC25.23■■□□□ 1.63
Foxi3E0CZH3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Foxi3E0CZH3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Foxi3E0CZH3 Psd-208ENSMUST00000224556 2034 ntBASIC24.78■■□□□ 1.56
Foxi3E0CZH3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Foxi3E0CZH3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Foxi3E0CZH3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Foxi3E0CZH3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Foxi3E0CZH3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Foxi3E0CZH3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Foxi3E0CZH3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Foxi3E0CZH3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Foxi3E0CZH3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Foxi3E0CZH3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Foxi3E0CZH3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Foxi3E0CZH3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxi3E0CZH3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Foxi3E0CZH3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Foxi3E0CZH3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23■■□□□ 1.27
Foxi3E0CZH3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Foxi3E0CZH3 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.91■■□□□ 1.26
Foxi3E0CZH3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Foxi3E0CZH3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Foxi3E0CZH3 Gm15042-201ENSMUST00000120212 883 ntBASIC22.71■■□□□ 1.23
Foxi3E0CZH3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Foxi3E0CZH3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Foxi3E0CZH3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Foxi3E0CZH3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.48■■□□□ 1.19
Foxi3E0CZH3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Foxi3E0CZH3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Foxi3E0CZH3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.32■■□□□ 1.16
Foxi3E0CZH3 Gm15045-201ENSMUST00000117359 883 ntBASIC22.28■■□□□ 1.16
Foxi3E0CZH3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxi3E0CZH3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.22■■□□□ 1.15
Foxi3E0CZH3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxi3E0CZH3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Foxi3E0CZH3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Foxi3E0CZH3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Foxi3E0CZH3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Foxi3E0CZH3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Foxi3E0CZH3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Foxi3E0CZH3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxi3E0CZH3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxi3E0CZH3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Foxi3E0CZH3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Foxi3E0CZH3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxi3E0CZH3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxi3E0CZH3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxi3E0CZH3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.72■■□□□ 1.07
Foxi3E0CZH3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxi3E0CZH3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxi3E0CZH3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxi3E0CZH3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.67■■□□□ 1.06
Foxi3E0CZH3 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.65■■□□□ 1.06
Foxi3E0CZH3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.64■■□□□ 1.05
Foxi3E0CZH3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxi3E0CZH3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxi3E0CZH3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxi3E0CZH3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxi3E0CZH3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.58■■□□□ 1.05
Foxi3E0CZH3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxi3E0CZH3 Gm24109-201ENSMUST00000175489 103 ntBASIC21.57■■□□□ 1.04
Foxi3E0CZH3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.56■■□□□ 1.04
Foxi3E0CZH3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Foxi3E0CZH3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Foxi3E0CZH3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Foxi3E0CZH3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Foxi3E0CZH3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Foxi3E0CZH3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Foxi3E0CZH3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxi3E0CZH3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxi3E0CZH3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxi3E0CZH3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Foxi3E0CZH3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Foxi3E0CZH3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.26■□□□□ 0.99
Foxi3E0CZH3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxi3E0CZH3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Foxi3E0CZH3 Gm23366-201ENSMUST00000175022 89 ntBASIC21.22■□□□□ 0.99
Foxi3E0CZH3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Foxi3E0CZH3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxi3E0CZH3 Zxda-201ENSMUST00000117281 2621 ntBASIC21.17■□□□□ 0.98
Foxi3E0CZH3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxi3E0CZH3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxi3E0CZH3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Foxi3E0CZH3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Foxi3E0CZH3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Foxi3E0CZH3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Foxi3E0CZH3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxi3E0CZH3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxi3E0CZH3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Foxi3E0CZH3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxi3E0CZH3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxi3E0CZH3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxi3E0CZH3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxi3E0CZH3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxi3E0CZH3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxi3E0CZH3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxi3E0CZH3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms