Protein–RNA interactions for Protein: E9Q2C0

Cfap46, Cilia and flagella-associated protein 46, mousemouse

Predictions only

Length 2,641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap46E9Q2C0 Gm25239-201ENSMUST00000174915 86 ntBASIC37.58■■■■□ 3.61
Cfap46E9Q2C0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Cfap46E9Q2C0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Cfap46E9Q2C0 Gm24109-201ENSMUST00000175489 103 ntBASIC33.15■■■□□ 2.9
Cfap46E9Q2C0 Gm15042-201ENSMUST00000120212 883 ntBASIC31.74■■■□□ 2.67
Cfap46E9Q2C0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Cfap46E9Q2C0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Cfap46E9Q2C0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Cfap46E9Q2C0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cfap46E9Q2C0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.02■■■□□ 2.56
Cfap46E9Q2C0 Gm15045-201ENSMUST00000117359 883 ntBASIC31■■■□□ 2.55
Cfap46E9Q2C0 Gm23366-201ENSMUST00000175022 89 ntBASIC30.97■■■□□ 2.55
Cfap46E9Q2C0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cfap46E9Q2C0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cfap46E9Q2C0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.82■■■□□ 2.52
Cfap46E9Q2C0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.78■■■□□ 2.52
Cfap46E9Q2C0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Cfap46E9Q2C0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.14■■■□□ 2.42
Cfap46E9Q2C0 Gm25238-201ENSMUST00000174914 89 ntBASIC29.98■■■□□ 2.39
Cfap46E9Q2C0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Cfap46E9Q2C0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cfap46E9Q2C0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Cfap46E9Q2C0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
Cfap46E9Q2C0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cfap46E9Q2C0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Cfap46E9Q2C0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.27
Cfap46E9Q2C0 Gm25262-201ENSMUST00000174934 133 ntBASIC29.16■■■□□ 2.26
Cfap46E9Q2C0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.15■■■□□ 2.26
Cfap46E9Q2C0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Cfap46E9Q2C0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.89■■■□□ 2.22
Cfap46E9Q2C0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
Cfap46E9Q2C0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.75■■■□□ 2.19
Cfap46E9Q2C0 Gm26115-201ENSMUST00000175605 87 ntBASIC28.69■■■□□ 2.18
Cfap46E9Q2C0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Cfap46E9Q2C0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.56■■■□□ 2.16
Cfap46E9Q2C0 Gm8109-201ENSMUST00000194076 746 ntBASIC28.46■■■□□ 2.15
Cfap46E9Q2C0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cfap46E9Q2C0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Cfap46E9Q2C0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cfap46E9Q2C0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.35■■■□□ 2.13
Cfap46E9Q2C0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cfap46E9Q2C0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.27■■■□□ 2.12
Cfap46E9Q2C0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.26■■■□□ 2.11
Cfap46E9Q2C0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.18■■■□□ 2.1
Cfap46E9Q2C0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cfap46E9Q2C0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.17■■■□□ 2.1
Cfap46E9Q2C0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Cfap46E9Q2C0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Cfap46E9Q2C0 Rab21-202ENSMUST00000218831 843 ntBASIC27.9■■■□□ 2.06
Cfap46E9Q2C0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
Cfap46E9Q2C0 Gm27325-201ENSMUST00000175467 74 ntBASIC27.89■■■□□ 2.06
Cfap46E9Q2C0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Cfap46E9Q2C0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cfap46E9Q2C0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cfap46E9Q2C0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.74■■■□□ 2.03
Cfap46E9Q2C0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.72■■■□□ 2.03
Cfap46E9Q2C0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Cfap46E9Q2C0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cfap46E9Q2C0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Cfap46E9Q2C0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.54■■■□□ 2
Cfap46E9Q2C0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Cfap46E9Q2C0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.53■■■□□ 2
Cfap46E9Q2C0 Gm24804-201ENSMUST00000174982 85 ntBASIC27.5■■□□□ 1.99
Cfap46E9Q2C0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cfap46E9Q2C0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Cfap46E9Q2C0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cfap46E9Q2C0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cfap46E9Q2C0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cfap46E9Q2C0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cfap46E9Q2C0 Psd-208ENSMUST00000224556 2034 ntBASIC27.25■■□□□ 1.95
Cfap46E9Q2C0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.22■■□□□ 1.95
Cfap46E9Q2C0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cfap46E9Q2C0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.21■■□□□ 1.95
Cfap46E9Q2C0 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.13■■□□□ 1.93
Cfap46E9Q2C0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cfap46E9Q2C0 Zfp131-205ENSMUST00000223812 663 ntBASIC27.12■■□□□ 1.93
Cfap46E9Q2C0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.1■■□□□ 1.93
Cfap46E9Q2C0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cfap46E9Q2C0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cfap46E9Q2C0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.03■■□□□ 1.92
Cfap46E9Q2C0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cfap46E9Q2C0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cfap46E9Q2C0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cfap46E9Q2C0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Cfap46E9Q2C0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Cfap46E9Q2C0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
Cfap46E9Q2C0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.8■■□□□ 1.88
Cfap46E9Q2C0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cfap46E9Q2C0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.76■■□□□ 1.87
Cfap46E9Q2C0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cfap46E9Q2C0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cfap46E9Q2C0 Gm27322-201ENSMUST00000184007 104 ntBASIC26.72■■□□□ 1.87
Cfap46E9Q2C0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.71■■□□□ 1.87
Cfap46E9Q2C0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cfap46E9Q2C0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cfap46E9Q2C0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.62■■□□□ 1.85
Cfap46E9Q2C0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.62■■□□□ 1.85
Cfap46E9Q2C0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cfap46E9Q2C0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Cfap46E9Q2C0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms