Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Gm25239-201ENSMUST00000174915 86 ntBASIC36.67■■■■□ 3.46
Tnrc6aQ3UHK8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
Tnrc6aQ3UHK8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Tnrc6aQ3UHK8 Gm24109-201ENSMUST00000175489 103 ntBASIC32.03■■■□□ 2.72
Tnrc6aQ3UHK8 Gm15042-201ENSMUST00000120212 883 ntBASIC31.88■■■□□ 2.69
Tnrc6aQ3UHK8 Gm15045-201ENSMUST00000117359 883 ntBASIC31.37■■■□□ 2.61
Tnrc6aQ3UHK8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Tnrc6aQ3UHK8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Tnrc6aQ3UHK8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tnrc6aQ3UHK8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Tnrc6aQ3UHK8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Tnrc6aQ3UHK8 Gm23366-201ENSMUST00000175022 89 ntBASIC30.53■■■□□ 2.48
Tnrc6aQ3UHK8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Tnrc6aQ3UHK8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
Tnrc6aQ3UHK8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.82■■■□□ 2.36
Tnrc6aQ3UHK8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Tnrc6aQ3UHK8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.52■■■□□ 2.32
Tnrc6aQ3UHK8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.4■■■□□ 2.3
Tnrc6aQ3UHK8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Tnrc6aQ3UHK8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
Tnrc6aQ3UHK8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Tnrc6aQ3UHK8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Tnrc6aQ3UHK8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Tnrc6aQ3UHK8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Tnrc6aQ3UHK8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.04■■■□□ 2.24
Tnrc6aQ3UHK8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Tnrc6aQ3UHK8 Gm25238-201ENSMUST00000174914 89 ntBASIC29■■■□□ 2.23
Tnrc6aQ3UHK8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.99■■■□□ 2.23
Tnrc6aQ3UHK8 Psd-208ENSMUST00000224556 2034 ntBASIC28.94■■■□□ 2.22
Tnrc6aQ3UHK8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Tnrc6aQ3UHK8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tnrc6aQ3UHK8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Tnrc6aQ3UHK8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Tnrc6aQ3UHK8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.62■■■□□ 2.17
Tnrc6aQ3UHK8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
Tnrc6aQ3UHK8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tnrc6aQ3UHK8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tnrc6aQ3UHK8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Tnrc6aQ3UHK8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.17■■■□□ 2.1
Tnrc6aQ3UHK8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tnrc6aQ3UHK8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
Tnrc6aQ3UHK8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.08■■■□□ 2.09
Tnrc6aQ3UHK8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Tnrc6aQ3UHK8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.92■■■□□ 2.06
Tnrc6aQ3UHK8 Gm27325-201ENSMUST00000175467 74 ntBASIC27.92■■■□□ 2.06
Tnrc6aQ3UHK8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Tnrc6aQ3UHK8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Tnrc6aQ3UHK8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.79■■■□□ 2.04
Tnrc6aQ3UHK8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Tnrc6aQ3UHK8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Tnrc6aQ3UHK8 Gm25262-201ENSMUST00000174934 133 ntBASIC27.72■■■□□ 2.03
Tnrc6aQ3UHK8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Tnrc6aQ3UHK8 Rab21-202ENSMUST00000218831 843 ntBASIC27.47■■□□□ 1.99
Tnrc6aQ3UHK8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.47■■□□□ 1.99
Tnrc6aQ3UHK8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.42■■□□□ 1.98
Tnrc6aQ3UHK8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Tnrc6aQ3UHK8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Tnrc6aQ3UHK8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Tnrc6aQ3UHK8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.37■■□□□ 1.97
Tnrc6aQ3UHK8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.37■■□□□ 1.97
Tnrc6aQ3UHK8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.37■■□□□ 1.97
Tnrc6aQ3UHK8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Tnrc6aQ3UHK8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Tnrc6aQ3UHK8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Tnrc6aQ3UHK8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.22■■□□□ 1.95
Tnrc6aQ3UHK8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Tnrc6aQ3UHK8 Gm26115-201ENSMUST00000175605 87 ntBASIC27.18■■□□□ 1.94
Tnrc6aQ3UHK8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.18■■□□□ 1.94
Tnrc6aQ3UHK8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Tnrc6aQ3UHK8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Tnrc6aQ3UHK8 Gm8109-201ENSMUST00000194076 746 ntBASIC27.15■■□□□ 1.94
Tnrc6aQ3UHK8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tnrc6aQ3UHK8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.13■■□□□ 1.93
Tnrc6aQ3UHK8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Tnrc6aQ3UHK8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Tnrc6aQ3UHK8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Tnrc6aQ3UHK8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Tnrc6aQ3UHK8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.98■■□□□ 1.91
Tnrc6aQ3UHK8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.97■■□□□ 1.91
Tnrc6aQ3UHK8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.94■■□□□ 1.9
Tnrc6aQ3UHK8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Tnrc6aQ3UHK8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Tnrc6aQ3UHK8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Tnrc6aQ3UHK8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Tnrc6aQ3UHK8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Tnrc6aQ3UHK8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Tnrc6aQ3UHK8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Tnrc6aQ3UHK8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Tnrc6aQ3UHK8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Tnrc6aQ3UHK8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Tnrc6aQ3UHK8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Tnrc6aQ3UHK8 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.64■■□□□ 1.85
Tnrc6aQ3UHK8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.62■■□□□ 1.85
Tnrc6aQ3UHK8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.62■■□□□ 1.85
Tnrc6aQ3UHK8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Tnrc6aQ3UHK8 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.54■■□□□ 1.84
Tnrc6aQ3UHK8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Tnrc6aQ3UHK8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.53■■□□□ 1.84
Tnrc6aQ3UHK8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Tnrc6aQ3UHK8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms