RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 Fhl3Q9R059 289 aa13.2□□□□□ -0.3
Col27a1-201ENSMUST00000036300 PtprbB2RU80 1998 aa13.2□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Trav13d-4A0A0G2JFX3 110 aa13.2□□□□□ -0.3
Col27a1-201ENSMUST00000036300 P01837 106 aa13.2□□□□□ -0.3
Col27a1-201ENSMUST00000036300 A730015C16RikQ8C992 119 aa13.2□□□□□ -0.3
Col27a1-201ENSMUST00000036300 BC035044E0CXF8 138 aa13.2□□□□□ -0.3
Col27a1-201ENSMUST00000036300 P01643 108 aa13.2□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Tmem258P61166 79 aa13.2□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Cd33Q63994 403 aa13.2□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Atp5g3P56384 141 aa13.19□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Sec61gP60060 68 aa13.19□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Atp5g1Q9CR84 136 aa13.19□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Trbv14A0A140T8L9 115 aa13.19□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Gata3P23772 443 aa13.19□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Ociad2Q9D8W7 154 aa13.19□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Defb47Q30KN1 79 aa13.19□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Tmem14cQ9CQN6 114 aa13.19□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Mustn1Q99JI1 82 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 MgamB5THE2 1827 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 LoxP28301 411 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 9430097D07RikQ8BS47 195 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Ighv3-1A0A075B5S6 116 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Bex1Q9R224 128 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Trav13-2A0A075B649 110 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 CrygdP04342 174 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Klk12B2RVZ0 247 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Ly6g5bQ8K1T4 194 aa13.18□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Iglv1A0A075B663 117 aa13.17□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Cox17P56394 63 aa13.17□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Ighv6-7A0A0A6YWU3 119 aa13.17□□□□□ -0.3
Col27a1-201ENSMUST00000036300 NmbQ9CR53 121 aa13.17□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Egr2P08152 470 aa13.17□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Gm17324Q8C6J8 137 aa13.17□□□□□ -0.3
Col27a1-201ENSMUST00000036300 SvipQ3UZP4 77 aa13.17□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Ighv1-12A0A0A6YXJ9 117 aa13.17□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Gm17577J3QNF7 156 aa13.16□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Zfp36l1P23950 338 aa13.16□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Loxl1P97873 607 aa13.16□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Fam222aQ6PGH4 453 aa13.16□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Trbv13-1A0A0B4J1P8 112 aa13.16□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Lst1O08843 95 aa13.16□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Ifitm1Q9D103 106 aa13.16□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Carhsp1Q9CR86 148 aa13.16□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Cd300eQ8K249 196 aa13.15□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Tcl1b2P56841 117 aa13.15□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Plscr4P58196 326 aa13.15□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Ighv1-19A0A0A6YWX0 117 aa13.15□□□□□ -0.3
Col27a1-201ENSMUST00000036300 Ighv8-8A0A0A6YXQ0 119 aa13.14□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Ighv1-62-2A0A0A6YXZ4 119 aa13.14□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Sh2d1aO88890 126 aa13.14□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Igkv8-21A0A140T8P7 120 aa13.14□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Ang3P97802 145 aa13.14□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Igkv4-92A0A0B4J1I2 117 aa13.14□□□□□ -0.31
Col27a1-201ENSMUST00000036300 A930003A15RikQ3U552 87 aa13.13□□□□□ -0.31
Col27a1-201ENSMUST00000036300 LenepQ9WVB6 61 aa13.13□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Igkv2-109A0A075B5K6 120 aa13.13□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Gm37389A0A0A6YW05 95 aa13.13□□□□□ -0.31
Col27a1-201ENSMUST00000036300 P01753 117 aa13.12□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Trav4n-4A0A075B615 110 aa13.12□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Q08AU9 97 aa13.12□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Ighv12-3A0A075B5T1 117 aa13.12□□□□□ -0.31
Col27a1-201ENSMUST00000036300 4933414I15RikQ9D4D5 133 aa13.12□□□□□ -0.31
Col27a1-201ENSMUST00000036300 P01750 117 aa13.11□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Igkv12-89A0A0G2JGW8 112 aa13.11□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Gm10638F6QEG2 257 aa13.11□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Rbmy1bQ60990 380 aa13.11□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Brk1Q91VR8 75 aa13.11□□□□□ -0.31
Col27a1-201ENSMUST00000036300 1700074P13RikQ9D9G7 251 aa13.11□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Gphb5Q812B2 130 aa13.11□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Tm2d1Q99MB3 208 aa13.11□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Klf11Q8K1S5 502 aa13.1□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Foxs1Q61574 329 aa13.1□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Znf672Q99LH4 468 aa13.1□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Trav13n-1A0A0G2JEU8 110 aa13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Vpreb3D3Z6J4 130 aa13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Odf1Q61999 247 aa13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Znrf2Q71FD5 238 aa13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Vopp1Q8R1C3 172 aa13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Gm20379A0A087WR34 119 aa13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 H2al1nQ497L1 109 aa13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Foxi3E0CZH3 425 aa13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Nup210Q9QY81 1886 aaKnown RBP13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Defb13Q8R2I4 64 aa13.09□□□□□ -0.31
Col27a1-201ENSMUST00000036300 B230359F08RikA0A0B4J1K3 109 aa13.08□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Fam19a1Q7TPG8 133 aa13.08□□□□□ -0.31
Col27a1-201ENSMUST00000036300 Tomm6Q9CQN3 74 aa13.08□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Pom121l2Q5SW25 972 aa13.08□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Q99M08 65 aa13.08□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Esm1Q9QYY7 184 aa13.08□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Trav13-4-dv7A0A075B6C2 110 aa13.08□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Trav13n-2A0A0G2JF93 110 aa13.08□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Rnf138Q9CQE0 245 aaKnown RBP13.08□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Trav13d-1A0A075B606 110 aa13.07□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Trav13-1A0A075B644 110 aa13.07□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Tet2Q4JK59 1912 aaKnown RBP13.07□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Trav6n-6A0A075B6B2 114 aa13.07□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Fgf6P21658 208 aa13.07□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Myo9aQ8C170 2542 aa13.06□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Naa38Q9D2U5 125 aa13.06□□□□□ -0.32
Col27a1-201ENSMUST00000036300 Tal2Q62282 108 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms