RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 Rhox8Q6VSS7 320 aa29,83■■■□□ 2,37
Col27a1-201ENSMUST00000036300 Ehmt2Q9Z148 1263 aaKnown RBP27,08■■□□□ 1,93
Col27a1-201ENSMUST00000036300 Ube2uB1AUC4 352 aa26,81■■□□□ 1,88
Col27a1-201ENSMUST00000036300 Esf1Q3V1V3 845 aaKnown RBP26,57■■□□□ 1,84
Col27a1-201ENSMUST00000036300 Wdr66E9Q743 1299 aa26,5■■□□□ 1,83
Col27a1-201ENSMUST00000036300 Cngb1E1AZ71 1325 aa26,42■■□□□ 1,82
Col27a1-201ENSMUST00000036300 Zeb1Q64318 1117 aa26,4■■□□□ 1,82
Col27a1-201ENSMUST00000036300 Ccdc136Q3TVA9 1136 aa26,29■■□□□ 1,8
Col27a1-201ENSMUST00000036300 Las1lA2BE28 776 aaKnown RBP26,29■■□□□ 1,8
Col27a1-201ENSMUST00000036300 Rpgrip1Q9EPQ2 1331 aa26,28■■□□□ 1,8
Col27a1-201ENSMUST00000036300 Pelp1Q9DBD5 1123 aaKnown RBP26,24■■□□□ 1,79
Col27a1-201ENSMUST00000036300 Npm2Q80W85 207 aa26,03■■□□□ 1,76
Col27a1-201ENSMUST00000036300 Gab3Q8BSM5 595 aa26,01■■□□□ 1,75
Col27a1-201ENSMUST00000036300 Myt1lP97500 1187 aa25,85■■□□□ 1,73
Col27a1-201ENSMUST00000036300 Amer1Q7TS75 1132 aa25,65■■□□□ 1,7
Col27a1-201ENSMUST00000036300 Slc24a1Q91WD8 1130 aa25,39■■□□□ 1,65
Col27a1-201ENSMUST00000036300 Trim41Q5NCC3 630 aa25,29■■□□□ 1,64
Col27a1-201ENSMUST00000036300 UbtfP25976 765 aaKnown RBP25,09■■□□□ 1,61
Col27a1-201ENSMUST00000036300 Il27Q8K3I6 234 aa24,85■■□□□ 1,57
Col27a1-201ENSMUST00000036300 Ttbk1Q6PCN3 1308 aa24,77■■□□□ 1,56
Col27a1-201ENSMUST00000036300 Stra8P70278 393 aa24,75■■□□□ 1,55
Col27a1-201ENSMUST00000036300 CenpbP27790 599 aa24,72■■□□□ 1,55
Col27a1-201ENSMUST00000036300 Os9Q8K2C7 672 aa24,7■■□□□ 1,55
Col27a1-201ENSMUST00000036300 4930567H17RikQ3V0K5 233 aa24,7■■□□□ 1,54
Col27a1-201ENSMUST00000036300 Neurod1Q60867 357 aa24,68■■□□□ 1,54
Col27a1-201ENSMUST00000036300 Ap3b1Q9Z1T1 1105 aa24,52■■□□□ 1,52
Col27a1-201ENSMUST00000036300 Fam50aQ9WV03 339 aaKnown RBP24,45■■□□□ 1,5
Col27a1-201ENSMUST00000036300 4933416C03RikQ3V063 378 aa24,42■■□□□ 1,5
Col27a1-201ENSMUST00000036300 Eif5bQ05D44 1216 aaKnown RBP24,39■■□□□ 1,5
Col27a1-201ENSMUST00000036300 Anp32bQ9EST5 272 aaKnown RBP24,39■■□□□ 1,49
Col27a1-201ENSMUST00000036300 NrdcQ8BHG1 1161 aa24,38■■□□□ 1,49
Col27a1-201ENSMUST00000036300 NefmP08553 848 aa24,37■■□□□ 1,49
Col27a1-201ENSMUST00000036300 HrcG5E8J6 738 aa24,33■■□□□ 1,49
Col27a1-201ENSMUST00000036300 NeflP08551 543 aa24,32■■□□□ 1,48
Col27a1-201ENSMUST00000036300 NclP09405 707 aaKnown RBP24,25■■□□□ 1,47
Col27a1-201ENSMUST00000036300 Zbtb7cQ8VCZ7 619 aa24,21■■□□□ 1,47
Col27a1-201ENSMUST00000036300 Chic1Q8CBW7 227 aa24,18■■□□□ 1,46
Col27a1-201ENSMUST00000036300 Ppargc1bQ8VHJ7 1014 aa24,15■■□□□ 1,46
Col27a1-201ENSMUST00000036300 NischQ80TM9 1593 aa24,08■■□□□ 1,44
Col27a1-201ENSMUST00000036300 Gm13697A2AK42 830 aa24,07■■□□□ 1,44
Col27a1-201ENSMUST00000036300 Cdk11bP24788 784 aaKnown RBP24,05■■□□□ 1,44
Col27a1-201ENSMUST00000036300 Acin1Q9JIX8 1338 aaKnown RBP24,04■■□□□ 1,44
Col27a1-201ENSMUST00000036300 Ifnlr1Q8CGK5 535 aa24,02■■□□□ 1,44
Col27a1-201ENSMUST00000036300 Hnrnpul2Q00PI9 745 aaKnown RBP23,91■■□□□ 1,42
Col27a1-201ENSMUST00000036300 Plppr3Q7TPB0 716 aa23,89■■□□□ 1,41
Col27a1-201ENSMUST00000036300 Atp1b4Q99ME6 356 aa23,83■■□□□ 1,41
Col27a1-201ENSMUST00000036300 Zbtb4Q5F293 982 aa23,79■■□□□ 1,4
Col27a1-201ENSMUST00000036300 Nop58Q6DFW4 536 aaKnown RBP23,73■■□□□ 1,39
Col27a1-201ENSMUST00000036300 Gm35339A0A140LHH9 1649 aa23,73■■□□□ 1,39
Col27a1-201ENSMUST00000036300 Prdm10Q3UTQ7 1184 aa23,72■■□□□ 1,39
Col27a1-201ENSMUST00000036300 Ccdc180J3QNE4 1664 aa23,69■■□□□ 1,38
Col27a1-201ENSMUST00000036300 Erich6D3Z6S9 713 aa23,67■■□□□ 1,38
Col27a1-201ENSMUST00000036300 Tnnt3Q9QZ47 272 aa23,66■■□□□ 1,38
Col27a1-201ENSMUST00000036300 Gm13695A2AK44 830 aa23,62■■□□□ 1,37
Col27a1-201ENSMUST00000036300 Polr3glQ8R0C0 218 aa23,57■■□□□ 1,36
Col27a1-201ENSMUST00000036300 Lmod2Q3UHZ5 550 aa23,55■■□□□ 1,36
Col27a1-201ENSMUST00000036300 DiexfQ8BTT6 772 aaKnown RBP23,54■■□□□ 1,36
Col27a1-201ENSMUST00000036300 Rtl1Q7M732 1744 aa23,53■■□□□ 1,36
Col27a1-201ENSMUST00000036300 TonslQ6NZL6 1363 aa23,52■■□□□ 1,36
Col27a1-201ENSMUST00000036300 Zcchc6Q5BLK4 1491 aaKnown RBP23,52■■□□□ 1,36
Col27a1-201ENSMUST00000036300 Nlrp6Q91WS2 869 aa23,48■■□□□ 1,35
Col27a1-201ENSMUST00000036300 Abcc9P70170 1546 aa23,48■■□□□ 1,35
Col27a1-201ENSMUST00000036300 Npm1Q61937 292 aaKnown RBP23,43■■□□□ 1,34
Col27a1-201ENSMUST00000036300 ArxO35085 564 aa23,4■■□□□ 1,34
Col27a1-201ENSMUST00000036300 Pcgf6Q99NA9 353 aa23,35■■□□□ 1,33
Col27a1-201ENSMUST00000036300 Rangap1P46061 589 aaKnown RBP23,34■■□□□ 1,33
Col27a1-201ENSMUST00000036300 Fkbp15Q6P9Q6 1216 aaKnown RBP23,34■■□□□ 1,33
Col27a1-201ENSMUST00000036300 DaxxO35613 739 aa23,29■■□□□ 1,32
Col27a1-201ENSMUST00000036300 Plekhg3Q4VAC9 1341 aa23,23■■□□□ 1,31
Col27a1-201ENSMUST00000036300 Mapk8ip2Q9ERE9 830 aa23,18■■□□□ 1,3
Col27a1-201ENSMUST00000036300 Supt5hO55201 1082 aaKnown RBP23,11■■□□□ 1,29
Col27a1-201ENSMUST00000036300 Myt1Q8CFC2 1127 aa23,1■■□□□ 1,29
Col27a1-201ENSMUST00000036300 Mier1Q5UAK0 511 aa23,08■■□□□ 1,29
Col27a1-201ENSMUST00000036300 CatipB9EKE5 520 aa23,01■■□□□ 1,27
Col27a1-201ENSMUST00000036300 Csrnp3P59055 597 aa23,01■■□□□ 1,27
Col27a1-201ENSMUST00000036300 Rtl5Q5DTT4 599 aa22,97■■□□□ 1,27
Col27a1-201ENSMUST00000036300 Safb2Q80YR5 991 aaKnown RBP22,97■■□□□ 1,27
Col27a1-201ENSMUST00000036300 Ythdc1E9Q5K9 736 aaKnown RBP22,86■■□□□ 1,25
Col27a1-201ENSMUST00000036300 Eid3Q3V124 375 aa22,84■■□□□ 1,25
Col27a1-201ENSMUST00000036300 Hsp90aa1P07901 733 aaKnown RBP22,82■■□□□ 1,24
Col27a1-201ENSMUST00000036300 P3h3Q8CG70 732 aa22,82■■□□□ 1,24
Col27a1-201ENSMUST00000036300 Hdac5Q9Z2V6 1113 aa22,82■■□□□ 1,24
Col27a1-201ENSMUST00000036300 Irx6Q9ER75 438 aa22,75■■□□□ 1,23
Col27a1-201ENSMUST00000036300 Anp32aO35381 247 aa22,74■■□□□ 1,23
Col27a1-201ENSMUST00000036300 Lmod3E9QA62 571 aa22,72■■□□□ 1,23
Col27a1-201ENSMUST00000036300 Upf2A2AT37 1269 aaKnown RBP22,72■■□□□ 1,23
Col27a1-201ENSMUST00000036300 Rad21Q61550 635 aaKnown RBP22,72■■□□□ 1,23
Col27a1-201ENSMUST00000036300 Vsig10D3YX43 558 aa22,69■■□□□ 1,22
Col27a1-201ENSMUST00000036300 ClspnQ80YR7 1315 aa22,64■■□□□ 1,22
Col27a1-201ENSMUST00000036300 Gm38655A0A286YDK6 273 aa22,64■■□□□ 1,21
Col27a1-201ENSMUST00000036300 Znf326O88291 580 aa22,64■■□□□ 1,21
Col27a1-201ENSMUST00000036300 Trim26Q99PN3 545 aa22,62■■□□□ 1,21
Col27a1-201ENSMUST00000036300 Fgd1P52734 960 aa22,62■■□□□ 1,21
Col27a1-201ENSMUST00000036300 DekQ7TNV0 380 aaKnown RBP22,57■■□□□ 1,2
Col27a1-201ENSMUST00000036300 Chic2Q9D9G3 165 aa22,5■■□□□ 1,19
Col27a1-201ENSMUST00000036300 Ubl4bQ9CQ84 188 aa22,49■■□□□ 1,19
Col27a1-201ENSMUST00000036300 Rtn4Q99P72 1162 aaKnown RBP22,48■■□□□ 1,19
Col27a1-201ENSMUST00000036300 Ppp4r2Q0VGB7 417 aa22,43■■□□□ 1,18
Col27a1-201ENSMUST00000036300 Clstn1Q9EPL2 979 aa22,42■■□□□ 1,18
Col27a1-201ENSMUST00000036300 Clip1Q922J3 1391 aa22,38■■□□□ 1,17
Retrieved 100 of 22,080 RNA–protein pairs in 28,6 ms