RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 Rhox8Q6VSS7 320 aa29.83■■■□□ 2.37
Col27a1-201ENSMUST00000036300 Ehmt2Q9Z148 1263 aaKnown RBP27.08■■□□□ 1.93
Col27a1-201ENSMUST00000036300 Ube2uB1AUC4 352 aa26.81■■□□□ 1.88
Col27a1-201ENSMUST00000036300 Esf1Q3V1V3 845 aaKnown RBP26.57■■□□□ 1.84
Col27a1-201ENSMUST00000036300 Wdr66E9Q743 1299 aa26.5■■□□□ 1.83
Col27a1-201ENSMUST00000036300 Cngb1E1AZ71 1325 aa26.42■■□□□ 1.82
Col27a1-201ENSMUST00000036300 Zeb1Q64318 1117 aa26.4■■□□□ 1.82
Col27a1-201ENSMUST00000036300 Ccdc136Q3TVA9 1136 aa26.29■■□□□ 1.8
Col27a1-201ENSMUST00000036300 Las1lA2BE28 776 aaKnown RBP26.29■■□□□ 1.8
Col27a1-201ENSMUST00000036300 Rpgrip1Q9EPQ2 1331 aa26.28■■□□□ 1.8
Col27a1-201ENSMUST00000036300 Pelp1Q9DBD5 1123 aaKnown RBP26.24■■□□□ 1.79
Col27a1-201ENSMUST00000036300 Npm2Q80W85 207 aa26.03■■□□□ 1.76
Col27a1-201ENSMUST00000036300 Gab3Q8BSM5 595 aa26.01■■□□□ 1.75
Col27a1-201ENSMUST00000036300 Myt1lP97500 1187 aa25.85■■□□□ 1.73
Col27a1-201ENSMUST00000036300 Amer1Q7TS75 1132 aa25.65■■□□□ 1.7
Col27a1-201ENSMUST00000036300 Slc24a1Q91WD8 1130 aa25.39■■□□□ 1.65
Col27a1-201ENSMUST00000036300 Trim41Q5NCC3 630 aa25.29■■□□□ 1.64
Col27a1-201ENSMUST00000036300 UbtfP25976 765 aaKnown RBP25.09■■□□□ 1.61
Col27a1-201ENSMUST00000036300 Il27Q8K3I6 234 aa24.85■■□□□ 1.57
Col27a1-201ENSMUST00000036300 Ttbk1Q6PCN3 1308 aa24.77■■□□□ 1.56
Col27a1-201ENSMUST00000036300 Stra8P70278 393 aa24.75■■□□□ 1.55
Col27a1-201ENSMUST00000036300 CenpbP27790 599 aa24.72■■□□□ 1.55
Col27a1-201ENSMUST00000036300 Os9Q8K2C7 672 aa24.7■■□□□ 1.55
Col27a1-201ENSMUST00000036300 4930567H17RikQ3V0K5 233 aa24.7■■□□□ 1.54
Col27a1-201ENSMUST00000036300 Neurod1Q60867 357 aa24.68■■□□□ 1.54
Col27a1-201ENSMUST00000036300 Ap3b1Q9Z1T1 1105 aa24.52■■□□□ 1.52
Col27a1-201ENSMUST00000036300 Fam50aQ9WV03 339 aaKnown RBP24.45■■□□□ 1.5
Col27a1-201ENSMUST00000036300 4933416C03RikQ3V063 378 aa24.42■■□□□ 1.5
Col27a1-201ENSMUST00000036300 Eif5bQ05D44 1216 aaKnown RBP24.39■■□□□ 1.5
Col27a1-201ENSMUST00000036300 Anp32bQ9EST5 272 aaKnown RBP24.39■■□□□ 1.49
Col27a1-201ENSMUST00000036300 NrdcQ8BHG1 1161 aa24.38■■□□□ 1.49
Col27a1-201ENSMUST00000036300 NefmP08553 848 aa24.37■■□□□ 1.49
Col27a1-201ENSMUST00000036300 HrcG5E8J6 738 aa24.33■■□□□ 1.49
Col27a1-201ENSMUST00000036300 NeflP08551 543 aa24.32■■□□□ 1.48
Col27a1-201ENSMUST00000036300 NclP09405 707 aaKnown RBP24.25■■□□□ 1.47
Col27a1-201ENSMUST00000036300 Zbtb7cQ8VCZ7 619 aa24.21■■□□□ 1.47
Col27a1-201ENSMUST00000036300 Chic1Q8CBW7 227 aa24.18■■□□□ 1.46
Col27a1-201ENSMUST00000036300 Ppargc1bQ8VHJ7 1014 aa24.15■■□□□ 1.46
Col27a1-201ENSMUST00000036300 NischQ80TM9 1593 aa24.08■■□□□ 1.44
Col27a1-201ENSMUST00000036300 Gm13697A2AK42 830 aa24.07■■□□□ 1.44
Col27a1-201ENSMUST00000036300 Cdk11bP24788 784 aaKnown RBP24.05■■□□□ 1.44
Col27a1-201ENSMUST00000036300 Acin1Q9JIX8 1338 aaKnown RBP24.04■■□□□ 1.44
Col27a1-201ENSMUST00000036300 Ifnlr1Q8CGK5 535 aa24.02■■□□□ 1.44
Col27a1-201ENSMUST00000036300 Hnrnpul2Q00PI9 745 aaKnown RBP23.91■■□□□ 1.42
Col27a1-201ENSMUST00000036300 Plppr3Q7TPB0 716 aa23.89■■□□□ 1.41
Col27a1-201ENSMUST00000036300 Atp1b4Q99ME6 356 aa23.83■■□□□ 1.41
Col27a1-201ENSMUST00000036300 Zbtb4Q5F293 982 aa23.79■■□□□ 1.4
Col27a1-201ENSMUST00000036300 Nop58Q6DFW4 536 aaKnown RBP23.73■■□□□ 1.39
Col27a1-201ENSMUST00000036300 Gm35339A0A140LHH9 1649 aa23.73■■□□□ 1.39
Col27a1-201ENSMUST00000036300 Prdm10Q3UTQ7 1184 aa23.72■■□□□ 1.39
Col27a1-201ENSMUST00000036300 Ccdc180J3QNE4 1664 aa23.69■■□□□ 1.38
Col27a1-201ENSMUST00000036300 Erich6D3Z6S9 713 aa23.67■■□□□ 1.38
Col27a1-201ENSMUST00000036300 Tnnt3Q9QZ47 272 aa23.66■■□□□ 1.38
Col27a1-201ENSMUST00000036300 Gm13695A2AK44 830 aa23.62■■□□□ 1.37
Col27a1-201ENSMUST00000036300 Polr3glQ8R0C0 218 aa23.57■■□□□ 1.36
Col27a1-201ENSMUST00000036300 Lmod2Q3UHZ5 550 aa23.55■■□□□ 1.36
Col27a1-201ENSMUST00000036300 DiexfQ8BTT6 772 aaKnown RBP23.54■■□□□ 1.36
Col27a1-201ENSMUST00000036300 Rtl1Q7M732 1744 aa23.53■■□□□ 1.36
Col27a1-201ENSMUST00000036300 TonslQ6NZL6 1363 aa23.52■■□□□ 1.36
Col27a1-201ENSMUST00000036300 Zcchc6Q5BLK4 1491 aaKnown RBP23.52■■□□□ 1.36
Col27a1-201ENSMUST00000036300 Nlrp6Q91WS2 869 aa23.48■■□□□ 1.35
Col27a1-201ENSMUST00000036300 Abcc9P70170 1546 aa23.48■■□□□ 1.35
Col27a1-201ENSMUST00000036300 Npm1Q61937 292 aaKnown RBP23.43■■□□□ 1.34
Col27a1-201ENSMUST00000036300 ArxO35085 564 aa23.4■■□□□ 1.34
Col27a1-201ENSMUST00000036300 Pcgf6Q99NA9 353 aa23.35■■□□□ 1.33
Col27a1-201ENSMUST00000036300 Rangap1P46061 589 aaKnown RBP23.34■■□□□ 1.33
Col27a1-201ENSMUST00000036300 Fkbp15Q6P9Q6 1216 aaKnown RBP23.34■■□□□ 1.33
Col27a1-201ENSMUST00000036300 DaxxO35613 739 aa23.29■■□□□ 1.32
Col27a1-201ENSMUST00000036300 Plekhg3Q4VAC9 1341 aa23.23■■□□□ 1.31
Col27a1-201ENSMUST00000036300 Mapk8ip2Q9ERE9 830 aa23.18■■□□□ 1.3
Col27a1-201ENSMUST00000036300 Supt5hO55201 1082 aaKnown RBP23.11■■□□□ 1.29
Col27a1-201ENSMUST00000036300 Myt1Q8CFC2 1127 aa23.1■■□□□ 1.29
Col27a1-201ENSMUST00000036300 Mier1Q5UAK0 511 aa23.08■■□□□ 1.29
Col27a1-201ENSMUST00000036300 CatipB9EKE5 520 aa23.01■■□□□ 1.27
Col27a1-201ENSMUST00000036300 Csrnp3P59055 597 aa23.01■■□□□ 1.27
Col27a1-201ENSMUST00000036300 Rtl5Q5DTT4 599 aa22.97■■□□□ 1.27
Col27a1-201ENSMUST00000036300 Safb2Q80YR5 991 aaKnown RBP22.97■■□□□ 1.27
Col27a1-201ENSMUST00000036300 Ythdc1E9Q5K9 736 aaKnown RBP22.86■■□□□ 1.25
Col27a1-201ENSMUST00000036300 Eid3Q3V124 375 aa22.84■■□□□ 1.25
Col27a1-201ENSMUST00000036300 Hsp90aa1P07901 733 aaKnown RBP22.82■■□□□ 1.24
Col27a1-201ENSMUST00000036300 P3h3Q8CG70 732 aa22.82■■□□□ 1.24
Col27a1-201ENSMUST00000036300 Hdac5Q9Z2V6 1113 aa22.82■■□□□ 1.24
Col27a1-201ENSMUST00000036300 Irx6Q9ER75 438 aa22.75■■□□□ 1.23
Col27a1-201ENSMUST00000036300 Anp32aO35381 247 aa22.74■■□□□ 1.23
Col27a1-201ENSMUST00000036300 Lmod3E9QA62 571 aa22.72■■□□□ 1.23
Col27a1-201ENSMUST00000036300 Upf2A2AT37 1269 aaKnown RBP22.72■■□□□ 1.23
Col27a1-201ENSMUST00000036300 Rad21Q61550 635 aaKnown RBP22.72■■□□□ 1.23
Col27a1-201ENSMUST00000036300 Vsig10D3YX43 558 aa22.69■■□□□ 1.22
Col27a1-201ENSMUST00000036300 ClspnQ80YR7 1315 aa22.64■■□□□ 1.22
Col27a1-201ENSMUST00000036300 Gm38655A0A286YDK6 273 aa22.64■■□□□ 1.21
Col27a1-201ENSMUST00000036300 Znf326O88291 580 aa22.64■■□□□ 1.21
Col27a1-201ENSMUST00000036300 Trim26Q99PN3 545 aa22.62■■□□□ 1.21
Col27a1-201ENSMUST00000036300 Fgd1P52734 960 aa22.62■■□□□ 1.21
Col27a1-201ENSMUST00000036300 DekQ7TNV0 380 aaKnown RBP22.57■■□□□ 1.2
Col27a1-201ENSMUST00000036300 Chic2Q9D9G3 165 aa22.5■■□□□ 1.19
Col27a1-201ENSMUST00000036300 Ubl4bQ9CQ84 188 aa22.49■■□□□ 1.19
Col27a1-201ENSMUST00000036300 Rtn4Q99P72 1162 aaKnown RBP22.48■■□□□ 1.19
Col27a1-201ENSMUST00000036300 Ppp4r2Q0VGB7 417 aa22.43■■□□□ 1.18
Col27a1-201ENSMUST00000036300 Clstn1Q9EPL2 979 aa22.42■■□□□ 1.18
Col27a1-201ENSMUST00000036300 Clip1Q922J3 1391 aa22.38■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms