RNA–Protein interactions for RNA: YDL036C

PUS9, Transcript of Mitochondrial tRNA:pseudouridine synthase, yeast

Gene PUS9, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS9	YDL036C	SMX3	P54999	86 aa	Predicted RBP	5.03	□□□□□ -1.6
PUS9	YDL036C	YSH1	Q06224	779 aa	Predicted RBP	5.03	□□□□□ -1.6
PUS9	YDL036C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
PUS9	YDL036C	THR1	P17423	357 aa	Known RBP	5.02	□□□□□ -1.61
PUS9	YDL036C	SET3	P36124	751 aa		5.02	□□□□□ -1.61
PUS9	YDL036C	MRPL7	P36519	292 aa		5.02	□□□□□ -1.61
PUS9	YDL036C	IDS2	P46958	469 aa		5.02	□□□□□ -1.61
PUS9	YDL036C	YPL108W	Q02872	168 aa	Predicted RBP	5.02	□□□□□ -1.61
PUS9	YDL036C	EFR3	Q03653	782 aa	Known RBP	5.02	□□□□□ -1.61
PUS9	YDL036C	YDL086W	Q07505	273 aa		5.02	□□□□□ -1.61
PUS9	YDL036C	TRM8	Q12009	286 aa		5.02	□□□□□ -1.61
PUS9	YDL036C	TAF3	Q12297	353 aa		5.02	□□□□□ -1.61
PUS9	YDL036C	RTP1	Q12751	981 aa		5.02	□□□□□ -1.61
PUS9	YDL036C	PRE2	P30656	287 aa	Known RBP	5.01	□□□□□ -1.61
PUS9	YDL036C	SWC3	P31376	625 aa		5.01	□□□□□ -1.61
PUS9	YDL036C	TEF4	P36008	412 aa	Known RBP	5.01	□□□□□ -1.61
PUS9	YDL036C	AXL2	P38928	823 aa		5.01	□□□□□ -1.61
PUS9	YDL036C	YER010C	P40011	234 aa		5.01	□□□□□ -1.61
PUS9	YDL036C	CCT7	P42943	550 aa	Known RBP	5.01	□□□□□ -1.61
PUS9	YDL036C	RRT6	P53117	311 aa	Predicted RBP	5.01	□□□□□ -1.61
PUS9	YDL036C	ICL2	Q12031	575 aa		5.01	□□□□□ -1.61
PUS9	YDL036C	USV1	Q12132	391 aa		5.01	□□□□□ -1.61
PUS9	YDL036C	PET122	P10355	254 aa		5	□□□□□ -1.61
PUS9	YDL036C	GUK1	P15454	187 aa	Known RBP	5	□□□□□ -1.61
PUS9	YDL036C	ELF1	P36053	145 aa		5	□□□□□ -1.61
PUS9	YDL036C	YEL020C	P39994	560 aa		5	□□□□□ -1.61
PUS9	YDL036C	YGR151C	P53287	111 aa		5	□□□□□ -1.61
PUS9	YDL036C	CBF2	P32504	956 aa		4.99	□□□□□ -1.61
PUS9	YDL036C	APL3	P38065	1025 aa		4.99	□□□□□ -1.61
PUS9	YDL036C	YHR097C	P38809	366 aa	Known RBP	4.99	□□□□□ -1.61
PUS9	YDL036C	PSP1	P50896	841 aa	Known RBP	4.99	□□□□□ -1.61
PUS9	YDL036C	ESF2	P53743	316 aa	Known RBP	4.99	□□□□□ -1.61
PUS9	YDL036C	ATG4	P53867	494 aa		4.99	□□□□□ -1.61
PUS9	YDL036C	CBK1	P53894	756 aa		4.99	□□□□□ -1.61
PUS9	YDL036C	MDM1	Q01846	1127 aa		4.99	□□□□□ -1.61
PUS9	YDL036C	RIM13	Q03792	727 aa		4.99	□□□□□ -1.61
PUS9	YDL036C	SUL2	Q12325	893 aa		4.99	□□□□□ -1.61
PUS9	YDL036C	TPK1	P06244	397 aa		4.98	□□□□□ -1.61
PUS9	YDL036C	CNS1	P33313	385 aa		4.98	□□□□□ -1.61
PUS9	YDL036C	ARB1	P40024	610 aa	Known RBP	4.98	□□□□□ -1.61
PUS9	YDL036C	THI6	P41835	540 aa		4.98	□□□□□ -1.61
PUS9	YDL036C	DIP5	P53388	608 aa		4.98	□□□□□ -1.61
PUS9	YDL036C	DAK1	P54838	584 aa	Known RBP	4.98	□□□□□ -1.61
PUS9	YDL036C	USA1	Q03714	838 aa		4.98	□□□□□ -1.61
PUS9	YDL036C	UFO1	Q04511	668 aa		4.98	□□□□□ -1.61
PUS9	YDL036C	RKI1	Q12189	258 aa		4.98	□□□□□ -1.61
PUS9	YDL036C	COX17	Q12287	69 aa		4.98	□□□□□ -1.61
PUS9	YDL036C	MED1	Q12321	566 aa		4.98	□□□□□ -1.61
PUS9	YDL036C	RPN13	O13563	156 aa		4.97	□□□□□ -1.61
PUS9	YDL036C	FUM1	P08417	488 aa	Known RBP	4.97	□□□□□ -1.61
PUS9	YDL036C	HOM2	P13663	365 aa	Known RBP	4.97	□□□□□ -1.61
PUS9	YDL036C	YCR061W	P25639	631 aa		4.97	□□□□□ -1.61
PUS9	YDL036C	MFT1	P33441	392 aa	Known RBP	4.97	□□□□□ -1.61
PUS9	YDL036C	NOP16	P40007	231 aa	Known RBP	4.97	□□□□□ -1.61
PUS9	YDL036C	DPH1	P40487	425 aa	Known RBP	4.97	□□□□□ -1.61
PUS9	YDL036C	SNF12	P53628	566 aa		4.97	□□□□□ -1.61
PUS9	YDL036C	VAM6	Q07468	1049 aa		4.97	□□□□□ -1.61
PUS9	YDL036C	BMS1	Q08965	1183 aa	Known RBP	4.97	□□□□□ -1.61
PUS9	YDL036C	ENT1	Q12518	454 aa		4.97	□□□□□ -1.61
PUS9	YDL036C	INH1	P01097	85 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	GCD7	P32502	381 aa	Predicted RBP	4.96	□□□□□ -1.62
PUS9	YDL036C	PAH1	P32567	862 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	NUP120	P35729	1037 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	MUD2	P36084	527 aa	Known RBP	4.96	□□□□□ -1.62
PUS9	YDL036C	SDH8	P38345	138 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	ARG2	P40360	574 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	RIC1	P40395	1056 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	SKP2	P42843	763 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	ZAP1	P47043	880 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	CSL4	P53859	292 aa	Predicted RBP	4.96	□□□□□ -1.62
PUS9	YDL036C	MFM1	Q02783	413 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	TSR2	Q06672	205 aa	Known RBP	4.96	□□□□□ -1.62
PUS9	YDL036C	YPL216W	Q08964	1102 aa		4.96	□□□□□ -1.62
PUS9	YDL036C	SAN1	P22470	610 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	YUR1	P26725	428 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	CCL1	P37366	393 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	KSP1	P38691	1029 aa	Known RBP	4.95	□□□□□ -1.62
PUS9	YDL036C	NDC80	P40460	691 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	IST3	P40565	148 aa	Predicted RBP	4.95	□□□□□ -1.62
PUS9	YDL036C	NMA2	P53204	395 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	RPS15	Q01855	142 aa	Known RBP	4.95	□□□□□ -1.62
PUS9	YDL036C	SNO4	Q04902	237 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	CRF1	Q04930	467 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	HSP33	Q08914	237 aa	Known RBP	4.95	□□□□□ -1.62
PUS9	YDL036C	HSP32	Q08992	237 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	NBP2	Q12163	236 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	PCD1	Q12524	340 aa		4.95	□□□□□ -1.62
PUS9	YDL036C	SEM1	O94742	89 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	LOT5	P34234	306 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	JNM1	P36224	373 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	YEL068C	P39977	110 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	NDE1	P40215	560 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	SRB7	P47822	140 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	UPF3	P48412	387 aa	Known RBP	4.94	□□□□□ -1.62
PUS9	YDL036C	CTR1	P49573	406 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	COG1	P53079	417 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	YIP4	P53093	235 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	BUD17	P53727	317 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	SEG1	Q04279	960 aa		4.94	□□□□□ -1.62
PUS9	YDL036C	IMH1	Q06704	911 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms