Protein–RNA interactions for Protein: Q03714

USA1, U1 SNP1-associating protein 1, yeastyeast

Predictions only

Length 838 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USA1Q03714 NSR1YGR159C 1245 nt20.73■□□□□ 0.91
USA1Q03714 YML009W-BYML009W-B 477 nt20.48■□□□□ 0.87
USA1Q03714 NOP1YDL014W 984 nt19.65■□□□□ 0.74
USA1Q03714 MDJ1YFL016C 1536 nt18.94■□□□□ 0.62
USA1Q03714 YKL036CYKL036C 393 nt17.74■□□□□ 0.43
USA1Q03714 YJL027CYJL027C 417 nt17.35■□□□□ 0.37
USA1Q03714 SRX1YKL086W 384 nt17.22■□□□□ 0.35
USA1Q03714 Q0297Q0297 156 nt17.1■□□□□ 0.33
USA1Q03714 DBP2YNL112W 1641 nt16.59■□□□□ 0.25
USA1Q03714 YCR051WYCR051W 669 nt16.31■□□□□ 0.2
USA1Q03714 YBR190WYBR190W 312 nt16.19■□□□□ 0.18
USA1Q03714 SCS3YGL126W 1143 nt15.96■□□□□ 0.15
USA1Q03714 TRN1tP(UGG)A 72 nt15.86■□□□□ 0.13
USA1Q03714 SUF9tP(UGG)F 72 nt15.86■□□□□ 0.13
USA1Q03714 SUF8tP(UGG)H 72 nt15.86■□□□□ 0.13
USA1Q03714 tP(UGG)LtP(UGG)L 72 nt15.86■□□□□ 0.13
USA1Q03714 SUF7tP(UGG)M 72 nt15.86■□□□□ 0.13
USA1Q03714 tP(UGG)N1tP(UGG)N1 72 nt15.86■□□□□ 0.13
USA1Q03714 tP(UGG)N2tP(UGG)N2 72 nt15.86■□□□□ 0.13
USA1Q03714 tP(UGG)O1tP(UGG)O1 72 nt15.86■□□□□ 0.13
USA1Q03714 SUF11tP(UGG)O2 72 nt15.86■□□□□ 0.13
USA1Q03714 RTC3YHR087W 336 nt15.82■□□□□ 0.12
USA1Q03714 CCC1YLR220W 969 nt15.73■□□□□ 0.11
USA1Q03714 YOL085CYOL085C 342 nt15.43■□□□□ 0.06
USA1Q03714 RPP1BYDL130W 321 nt15.35■□□□□ 0.05
USA1Q03714 RVS167YDR388W 1449 nt15.34■□□□□ 0.05
USA1Q03714 SCJ1YMR214W 1134 nt15.31■□□□□ 0.04
USA1Q03714 PKP1YIL042C 1185 nt15.29■□□□□ 0.04
USA1Q03714 SSA3YBL075C 1950 nt15.27■□□□□ 0.04
USA1Q03714 PUT4YOR348C 1884 nt15.13■□□□□ 0.01
USA1Q03714 tP(UGG)O3tP(UGG)O3 72 nt14.86□□□□□ -0.03
USA1Q03714 PET122YER153C 765 nt14.76□□□□□ -0.05
USA1Q03714 SHR5YOL110W 714 nt14.74□□□□□ -0.05
USA1Q03714 ARE1YCR048W 1833 nt14.72□□□□□ -0.05
USA1Q03714 URN1YPR152C 1398 nt14.65□□□□□ -0.06
USA1Q03714 POA1YBR022W 534 nt14.61□□□□□ -0.07
USA1Q03714 SAH1YER043C 1350 nt14.6□□□□□ -0.07
USA1Q03714 DEP1YAL013W 1218 nt14.56□□□□□ -0.08
USA1Q03714 OPI9YLR338W 858 nt14.53□□□□□ -0.08
USA1Q03714 YHR049C-AYHR049C-A 297 nt14.5□□□□□ -0.09
USA1Q03714 BSC6YOL137W 1494 nt14.38□□□□□ -0.11
USA1Q03714 SCR1SCR1 522 nt14.37□□□□□ -0.11
USA1Q03714 YDJ1YNL064C 1230 nt14.35□□□□□ -0.11
USA1Q03714 RRN5YLR141W 1092 nt14.28□□□□□ -0.12
USA1Q03714 RPN10YHR200W 807 nt14.23□□□□□ -0.13
USA1Q03714 YNL208WYNL208W 600 nt14.19□□□□□ -0.14
USA1Q03714 GAR1YHR089C 618 nt14.14□□□□□ -0.15
USA1Q03714 SPT5YML010W 3192 nt14.13□□□□□ -0.15
USA1Q03714 ATS1YAL020C 1002 nt14.13□□□□□ -0.15
USA1Q03714 BUD23YCR047C 828 nt14.12□□□□□ -0.15
USA1Q03714 PUN1YLR414C 792 nt14.05□□□□□ -0.16
USA1Q03714 PTC2YER089C 1395 nt14.03□□□□□ -0.16
USA1Q03714 YER088W-BYER088W-B 147 nt14□□□□□ -0.17
USA1Q03714 YJR018WYJR018W 363 nt13.94□□□□□ -0.18
USA1Q03714 NAB2YGL122C 1578 nt13.87□□□□□ -0.19
USA1Q03714 RSB1YOR049C 1065 nt13.81□□□□□ -0.2
USA1Q03714 SSA4YER103W 1929 nt13.79□□□□□ -0.2
USA1Q03714 YJR120WYJR120W 351 nt13.73□□□□□ -0.21
USA1Q03714 TIR1YER011W 765 nt13.68□□□□□ -0.22
USA1Q03714 FIS1YIL065C 468 nt13.68□□□□□ -0.22
USA1Q03714 SSA1YAL005C 1929 nt13.66□□□□□ -0.22
USA1Q03714 DAL1YIR027C 1383 nt13.6□□□□□ -0.23
USA1Q03714 FPR4YLR449W 1179 nt13.58□□□□□ -0.24
USA1Q03714 MEP2YNL142W 1500 nt13.54□□□□□ -0.24
USA1Q03714 PHO4YFR034C 939 nt13.5□□□□□ -0.25
USA1Q03714 INM2YDR287W 879 nt13.46□□□□□ -0.25
USA1Q03714 RPP2BYDR382W 333 nt13.46□□□□□ -0.25
USA1Q03714 SRB2YHR041C 633 nt13.44□□□□□ -0.26
USA1Q03714 YPS1YLR120C 1710 nt13.42□□□□□ -0.26
USA1Q03714 DCW1YKL046C 1350 nt13.37□□□□□ -0.27
USA1Q03714 BDF1YLR399C 2061 nt13.34□□□□□ -0.27
USA1Q03714 YBL100CYBL100C 315 nt13.29□□□□□ -0.28
USA1Q03714 YHR165W-AYHR165W-A 312 nt13.26□□□□□ -0.29
USA1Q03714 YDR095CYDR095C 411 nt13.24□□□□□ -0.29
USA1Q03714 PST2YDR032C 597 nt13.19□□□□□ -0.3
USA1Q03714 BDH2YAL061W 1254 nt13.17□□□□□ -0.3
USA1Q03714 FUN26YAL022C 1554 nt13.14□□□□□ -0.31
USA1Q03714 EMI2YDR516C 1503 nt13.13□□□□□ -0.31
USA1Q03714 TAT1YBR069C 1860 nt13.12□□□□□ -0.31
USA1Q03714 PTP1YDL230W 1008 nt13.07□□□□□ -0.32
USA1Q03714 YBR220CYBR220C 1683 nt13.07□□□□□ -0.32
USA1Q03714 CAC2YML102W 1407 nt13.06□□□□□ -0.32
USA1Q03714 WWM1YFL010C 636 nt13.04□□□□□ -0.32
USA1Q03714 YDL221WYDL221W 552 nt12.99□□□□□ -0.33
USA1Q03714 TRM9YML014W 840 nt12.98□□□□□ -0.33
USA1Q03714 YMR090WYMR090W 684 nt12.98□□□□□ -0.33
USA1Q03714 ALF1YNL148C 765 nt12.98□□□□□ -0.33
USA1Q03714 RPP2AYOL039W 321 nt12.98□□□□□ -0.33
USA1Q03714 SDH1YKL148C 1923 nt12.93□□□□□ -0.34
USA1Q03714 CCT6YDR188W 1641 nt12.9□□□□□ -0.34
USA1Q03714 LSM3YLR438C-A 270 nt12.89□□□□□ -0.35
USA1Q03714 SIS1YNL007C 1059 nt12.86□□□□□ -0.35
USA1Q03714 IRC15YPL017C 1500 nt12.85□□□□□ -0.35
USA1Q03714 SHU1YHL006C 453 nt12.78□□□□□ -0.36
USA1Q03714 SCC4YER147C 1875 nt12.78□□□□□ -0.36
USA1Q03714 YAL037C-BYAL037C-B 975 nt12.77□□□□□ -0.37
USA1Q03714 YFL021C-AYFL021C-A 855 nt12.76□□□□□ -0.37
USA1Q03714 SUF2tP(AGG)C 72 nt12.75□□□□□ -0.37
USA1Q03714 SUF10tP(AGG)N 72 nt12.75□□□□□ -0.37
USA1Q03714 GIS3YLR094C 1509 nt12.75□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms