RNA–Protein interactions for RNA: YDL036C

PUS9, Transcript of Mitochondrial tRNA:pseudouridine synthase, yeastyeast

Gene PUS9, Length 1,389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUS9YDL036C MTC1P47018 478 aaKnown RBP19.7■□□□□ 0.74
PUS9YDL036C FAP1P53971 965 aa18.81■□□□□ 0.6
PUS9YDL036C PRY3P47033 881 aa17.7■□□□□ 0.42
PUS9YDL036C DRS1P32892 752 aaKnown RBP17.53■□□□□ 0.4
PUS9YDL036C AAD16Q02895 342 aa17.15■□□□□ 0.34
PUS9YDL036C PRI1P10363 409 aa17.12■□□□□ 0.33
PUS9YDL036C YCK3P39962 524 aa16.64■□□□□ 0.25
PUS9YDL036C ISW2Q08773 1120 aa16.55■□□□□ 0.24
PUS9YDL036C HAA1Q12753 694 aaKnown RBP16.53■□□□□ 0.24
PUS9YDL036C RPG1P38249 964 aaKnown RBP16.41■□□□□ 0.22
PUS9YDL036C TSR3Q12094 313 aaKnown RBP16.16■□□□□ 0.18
PUS9YDL036C DIP2Q12220 943 aaPredicted RBP15.69■□□□□ 0.1
PUS9YDL036C MRPL32P25348 183 aa15.54■□□□□ 0.08
PUS9YDL036C RSE1Q04693 1361 aaKnown RBP15.43■□□□□ 0.06
PUS9YDL036C YGL015CP33199 130 aa15.14■□□□□ 0.01
PUS9YDL036C REB1P21538 810 aa15.03■□□□□ -0
PUS9YDL036C RPL17AP05740 184 aaKnown RBP15□□□□□ -0.01
PUS9YDL036C RPL17BP46990 184 aaKnown RBP15□□□□□ -0.01
PUS9YDL036C AVT3P36062 692 aa14.85□□□□□ -0.03
PUS9YDL036C CDC27P38042 758 aa14.58□□□□□ -0.08
PUS9YDL036C YKR023WP36119 530 aaKnown RBP14.31□□□□□ -0.12
PUS9YDL036C BUD31P25337 157 aaPredicted RBP14.26□□□□□ -0.13
PUS9YDL036C UBP10P53874 792 aaPredicted RBP14.26□□□□□ -0.13
PUS9YDL036C SPT21P35209 758 aa14.25□□□□□ -0.13
PUS9YDL036C MAP2P38174 421 aaKnown RBP14.23□□□□□ -0.13
PUS9YDL036C BFR2Q06631 534 aaKnown RBP14.14□□□□□ -0.15
PUS9YDL036C HOP09932 586 aa14.05□□□□□ -0.16
PUS9YDL036C DCD1P06773 312 aa14.02□□□□□ -0.17
PUS9YDL036C TFC8Q12308 588 aa14.02□□□□□ -0.17
PUS9YDL036C SCY1P53009 804 aa13.8□□□□□ -0.2
PUS9YDL036C TIF4632P39936 914 aaKnown RBP13.71□□□□□ -0.21
PUS9YDL036C SLX5P32828 619 aaKnown RBP13.67□□□□□ -0.22
PUS9YDL036C TGL3P40308 642 aa13.66□□□□□ -0.22
PUS9YDL036C RIM101P33400 625 aa13.57□□□□□ -0.24
PUS9YDL036C BCH2P36122 765 aa13.54□□□□□ -0.24
PUS9YDL036C UBP9P39967 754 aa13.53□□□□□ -0.24
PUS9YDL036C SIS1P25294 352 aaKnown RBP13.52□□□□□ -0.25
PUS9YDL036C EPS1P40557 701 aa13.14□□□□□ -0.31
PUS9YDL036C BDF1P35817 686 aa13.1□□□□□ -0.31
PUS9YDL036C OXP1P28273 1286 aa13.08□□□□□ -0.31
PUS9YDL036C MST1P07236 462 aa12.96□□□□□ -0.33
PUS9YDL036C PTP3P40048 928 aa12.95□□□□□ -0.34
PUS9YDL036C YIL055CP40523 627 aaKnown RBP12.94□□□□□ -0.34
PUS9YDL036C YBL029C-AQ3E756 94 aa12.93□□□□□ -0.34
PUS9YDL036C YOR238WQ08634 303 aa12.9□□□□□ -0.34
PUS9YDL036C NSR1P27476 414 aaKnown RBP RIP-Chip data12.76□□□□□ -0.37not detected
PUS9YDL036C BBC1P47068 1157 aa12.76□□□□□ -0.37
PUS9YDL036C VNX1P42839 908 aa12.74□□□□□ -0.37
PUS9YDL036C RSM7P47150 247 aa12.72□□□□□ -0.37
PUS9YDL036C YAP5P40574 245 aa12.69□□□□□ -0.38
PUS9YDL036C AI2P03876 854 aa12.68□□□□□ -0.38
PUS9YDL036C SPP1Q03012 353 aa12.64□□□□□ -0.39
PUS9YDL036C WSC3Q12215 556 aa12.62□□□□□ -0.39
PUS9YDL036C YAH1Q12184 172 aaKnown RBP12.61□□□□□ -0.39
PUS9YDL036C TIF11P38912 153 aaKnown RBP12.45□□□□□ -0.42
PUS9YDL036C GTT3P39996 337 aa12.45□□□□□ -0.42
PUS9YDL036C AIR2Q12476 344 aaKnown RBP12.43□□□□□ -0.42
PUS9YDL036C YJL171CP46992 396 aa12.4□□□□□ -0.42
PUS9YDL036C FKH1P40466 484 aa12.38□□□□□ -0.43
PUS9YDL036C YLR271WQ06152 274 aa12.33□□□□□ -0.44
PUS9YDL036C PIB1Q06651 286 aa12.29□□□□□ -0.44
PUS9YDL036C LDB19Q12502 818 aa12.27□□□□□ -0.45
PUS9YDL036C ULI1P43604 169 aa12.26□□□□□ -0.45
PUS9YDL036C PSD2P53037 1138 aaKnown RBP12.24□□□□□ -0.45
PUS9YDL036C IOC2Q12072 812 aa12.21□□□□□ -0.45
PUS9YDL036C MRM1P25270 412 aa12.18□□□□□ -0.46
PUS9YDL036C TFA1P36100 482 aa12.15□□□□□ -0.46
PUS9YDL036C BMT6Q12291 365 aa12.15□□□□□ -0.46
PUS9YDL036C MSB4Q12317 492 aa12.08□□□□□ -0.48
PUS9YDL036C EAP1P36041 632 aaKnown RBP12.05□□□□□ -0.48
PUS9YDL036C SET4P42948 560 aa12.01□□□□□ -0.49
PUS9YDL036C YOL036WQ08206 761 aa12□□□□□ -0.49
PUS9YDL036C RTG1P32607 177 aa11.97□□□□□ -0.49
PUS9YDL036C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.97□□□□□ -0.49not detected
PUS9YDL036C TRP5P00931 707 aaKnown RBP11.95□□□□□ -0.5
PUS9YDL036C YMR1P47147 688 aaKnown RBP RIP-Chip data11.95□□□□□ -0.5not detected
PUS9YDL036C SSP1P38871 571 aa11.94□□□□□ -0.5
PUS9YDL036C DBP1P24784 617 aaKnown RBP11.92□□□□□ -0.5
PUS9YDL036C NCR1Q12200 1170 aa11.92□□□□□ -0.5
PUS9YDL036C VPS29P38759 282 aa11.91□□□□□ -0.5
PUS9YDL036C YFR006WP43590 535 aa11.9□□□□□ -0.5
PUS9YDL036C YNL035CP53962 389 aaKnown RBP11.86□□□□□ -0.51
PUS9YDL036C CST9Q06032 482 aa11.86□□□□□ -0.51
PUS9YDL036C RTG3P38165 486 aa11.85□□□□□ -0.51
PUS9YDL036C VMA1P17255 1071 aaKnown RBP11.84□□□□□ -0.51
PUS9YDL036C SEC61P32915 480 aa11.82□□□□□ -0.52
PUS9YDL036C STS1P38637 319 aa11.81□□□□□ -0.52
PUS9YDL036C SAM3Q08986 587 aa11.79□□□□□ -0.52
PUS9YDL036C MGA2P40578 1113 aa11.77□□□□□ -0.53
PUS9YDL036C TFG1P41895 735 aaPredicted RBP11.72□□□□□ -0.53
PUS9YDL036C RCR1P38212 213 aa11.66□□□□□ -0.54
PUS9YDL036C SAP30P38429 201 aa11.64□□□□□ -0.55
PUS9YDL036C DAN4P47179 1161 aa11.64□□□□□ -0.55
PUS9YDL036C JIP4Q03361 876 aa11.63□□□□□ -0.55
PUS9YDL036C GYP5Q12344 894 aa11.61□□□□□ -0.55
PUS9YDL036C ABP1P15891 592 aaKnown RBP11.59□□□□□ -0.55
PUS9YDL036C YDL129WQ07555 291 aa11.56□□□□□ -0.56
PUS9YDL036C HTA1P04911 132 aaKnown RBP11.54□□□□□ -0.56
PUS9YDL036C HTA2P04912 132 aa11.54□□□□□ -0.56
PUS9YDL036C DCW1P36091 449 aa11.54□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms