Protein–RNA interactions for Protein: P06244

TPK1, cAMP-dependent protein kinase type 1, yeastyeast

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPK1P06244 YML009W-BYML009W-B 477 nt21.79■■□□□ 1.08
TPK1P06244 NSR1YGR159C 1245 nt21.38■■□□□ 1.01
TPK1P06244 NOP1YDL014W 984 nt21.18■□□□□ 0.98
TPK1P06244 YKL036CYKL036C 393 nt19.74■□□□□ 0.75
TPK1P06244 MDJ1YFL016C 1536 nt18.9■□□□□ 0.62
TPK1P06244 Q0297Q0297 156 nt18.59■□□□□ 0.57
TPK1P06244 SRX1YKL086W 384 nt18.51■□□□□ 0.55
TPK1P06244 YJL027CYJL027C 417 nt18.5■□□□□ 0.55
TPK1P06244 SCS3YGL126W 1143 nt18.09■□□□□ 0.49
TPK1P06244 YCR051WYCR051W 669 nt17.64■□□□□ 0.41
TPK1P06244 YOL085CYOL085C 342 nt17.11■□□□□ 0.33
TPK1P06244 PKP1YIL042C 1185 nt16.9■□□□□ 0.3
TPK1P06244 DBP2YNL112W 1641 nt16.77■□□□□ 0.27
TPK1P06244 RPP1BYDL130W 321 nt16.7■□□□□ 0.26
TPK1P06244 TRN1tP(UGG)A 72 nt16.63■□□□□ 0.25
TPK1P06244 SUF9tP(UGG)F 72 nt16.63■□□□□ 0.25
TPK1P06244 SUF8tP(UGG)H 72 nt16.63■□□□□ 0.25
TPK1P06244 tP(UGG)LtP(UGG)L 72 nt16.63■□□□□ 0.25
TPK1P06244 SUF7tP(UGG)M 72 nt16.63■□□□□ 0.25
TPK1P06244 tP(UGG)N1tP(UGG)N1 72 nt16.63■□□□□ 0.25
TPK1P06244 tP(UGG)N2tP(UGG)N2 72 nt16.63■□□□□ 0.25
TPK1P06244 tP(UGG)O1tP(UGG)O1 72 nt16.63■□□□□ 0.25
TPK1P06244 SUF11tP(UGG)O2 72 nt16.63■□□□□ 0.25
TPK1P06244 CCC1YLR220W 969 nt16.55■□□□□ 0.24
TPK1P06244 ATS1YAL020C 1002 nt16.22■□□□□ 0.19
TPK1P06244 SCJ1YMR214W 1134 nt16.16■□□□□ 0.18
TPK1P06244 PET122YER153C 765 nt15.98■□□□□ 0.15
TPK1P06244 YBR190WYBR190W 312 nt15.98■□□□□ 0.15
TPK1P06244 SCR1SCR1 522 nt15.83■□□□□ 0.12
TPK1P06244 tP(UGG)O3tP(UGG)O3 72 nt15.82■□□□□ 0.12
TPK1P06244 RVS167YDR388W 1449 nt15.79■□□□□ 0.12
TPK1P06244 RTC3YHR087W 336 nt15.72■□□□□ 0.11
TPK1P06244 RRN5YLR141W 1092 nt15.53■□□□□ 0.08
TPK1P06244 RSB1YOR049C 1065 nt15.29■□□□□ 0.04
TPK1P06244 SHR5YOL110W 714 nt15.28■□□□□ 0.04
TPK1P06244 YDJ1YNL064C 1230 nt15.24■□□□□ 0.03
TPK1P06244 YER088W-BYER088W-B 147 nt15.22■□□□□ 0.03
TPK1P06244 PST2YDR032C 597 nt14.97□□□□□ -0.01
TPK1P06244 GAR1YHR089C 618 nt14.97□□□□□ -0.01
TPK1P06244 DEP1YAL013W 1218 nt14.88□□□□□ -0.03
TPK1P06244 URN1YPR152C 1398 nt14.77□□□□□ -0.04
TPK1P06244 YNL208WYNL208W 600 nt14.58□□□□□ -0.08
TPK1P06244 RPN10YHR200W 807 nt14.55□□□□□ -0.08
TPK1P06244 YKL097CYKL097C 411 nt14.5□□□□□ -0.09
TPK1P06244 OPI9YLR338W 858 nt14.47□□□□□ -0.09
TPK1P06244 TIR1YER011W 765 nt14.42□□□□□ -0.1
TPK1P06244 PUT4YOR348C 1884 nt14.39□□□□□ -0.11
TPK1P06244 SAH1YER043C 1350 nt14.38□□□□□ -0.11
TPK1P06244 SHU1YHL006C 453 nt14.36□□□□□ -0.11
TPK1P06244 SSA1YAL005C 1929 nt14.23□□□□□ -0.13
TPK1P06244 ARE1YCR048W 1833 nt14.21□□□□□ -0.13
TPK1P06244 SSA3YBL075C 1950 nt14.14□□□□□ -0.15
TPK1P06244 YAL037C-BYAL037C-B 975 nt14.14□□□□□ -0.15
TPK1P06244 YJR018WYJR018W 363 nt14.09□□□□□ -0.15
TPK1P06244 SRB2YHR041C 633 nt14.06□□□□□ -0.16
TPK1P06244 YHR049C-AYHR049C-A 297 nt14.05□□□□□ -0.16
TPK1P06244 PUN1YLR414C 792 nt14.05□□□□□ -0.16
TPK1P06244 POA1YBR022W 534 nt14□□□□□ -0.17
TPK1P06244 YJR120WYJR120W 351 nt13.92□□□□□ -0.18
TPK1P06244 YOR139CYOR139C 393 nt13.9□□□□□ -0.18
TPK1P06244 PTC2YER089C 1395 nt13.89□□□□□ -0.19
TPK1P06244 RPP2BYDR382W 333 nt13.85□□□□□ -0.19
TPK1P06244 WWM1YFL010C 636 nt13.85□□□□□ -0.19
TPK1P06244 BUD23YCR047C 828 nt13.78□□□□□ -0.2
TPK1P06244 MNP1YGL068W 585 nt13.78□□□□□ -0.2
TPK1P06244 YGR021WYGR021W 873 nt13.76□□□□□ -0.21
TPK1P06244 NPL3YDR432W 1245 nt13.75□□□□□ -0.21
TPK1P06244 HOM6YJR139C 1080 nt13.75□□□□□ -0.21
TPK1P06244 NAB2YGL122C 1578 nt13.65□□□□□ -0.22
TPK1P06244 BSC6YOL137W 1494 nt13.64□□□□□ -0.23
TPK1P06244 BDH2YAL061W 1254 nt13.59□□□□□ -0.23
TPK1P06244 FPR4YLR449W 1179 nt13.57□□□□□ -0.24
TPK1P06244 YFL021C-AYFL021C-A 855 nt13.56□□□□□ -0.24
TPK1P06244 RKM5YLR137W 1104 nt13.55□□□□□ -0.24
TPK1P06244 YOL037CYOL037C 354 nt13.53□□□□□ -0.24
TPK1P06244 DAL1YIR027C 1383 nt13.52□□□□□ -0.25
TPK1P06244 INM2YDR287W 879 nt13.51□□□□□ -0.25
TPK1P06244 FIS1YIL065C 468 nt13.49□□□□□ -0.25
TPK1P06244 YBL100CYBL100C 315 nt13.47□□□□□ -0.25
TPK1P06244 LSM3YLR438C-A 270 nt13.42□□□□□ -0.26
TPK1P06244 PHO4YFR034C 939 nt13.4□□□□□ -0.26
TPK1P06244 tM(CAU)CtM(CAU)C 72 nt13.33□□□□□ -0.28
TPK1P06244 IMT4tM(CAU)E 72 nt13.33□□□□□ -0.28
TPK1P06244 IMT3tM(CAU)J3 72 nt13.33□□□□□ -0.28
TPK1P06244 IMT1tM(CAU)O1 72 nt13.33□□□□□ -0.28
TPK1P06244 IMT2tM(CAU)P 72 nt13.33□□□□□ -0.28
TPK1P06244 TRM9YML014W 840 nt13.32□□□□□ -0.28
TPK1P06244 FUN26YAL022C 1554 nt13.32□□□□□ -0.28
TPK1P06244 YLR281CYLR281C 468 nt13.22□□□□□ -0.29
TPK1P06244 PUS2YGL063W 1113 nt13.21□□□□□ -0.29
TPK1P06244 WHI5YOR083W 888 nt13.18□□□□□ -0.3
TPK1P06244 CCT6YDR188W 1641 nt13.14□□□□□ -0.31
TPK1P06244 ALF1YNL148C 765 nt13.09□□□□□ -0.31
TPK1P06244 YPS1YLR120C 1710 nt13.05□□□□□ -0.32
TPK1P06244 SUF2tP(AGG)C 72 nt13.02□□□□□ -0.33
TPK1P06244 SUF10tP(AGG)N 72 nt13.02□□□□□ -0.33
TPK1P06244 YLR154C-GYLR154C-G 150 nt13.01□□□□□ -0.33
TPK1P06244 SPT5YML010W 3192 nt13□□□□□ -0.33
TPK1P06244 YDR095CYDR095C 411 nt12.99□□□□□ -0.33
TPK1P06244 YHR165W-AYHR165W-A 312 nt12.93□□□□□ -0.34
Retrieved 100 of 7,029 protein–RNA pairs in 6.1 ms