RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W RIM4P38741 713 aa5.88□□□□□ -1.47
SHM1YBR263W PEX28P38848 579 aa5.88□□□□□ -1.47
SHM1YBR263W CAJ1P39101 391 aa5.88□□□□□ -1.47
SHM1YBR263W AVT2P39981 480 aa5.88□□□□□ -1.47
SHM1YBR263W MOB1P40484 314 aa5.88□□□□□ -1.47
SHM1YBR263W BRO1P48582 844 aa5.88□□□□□ -1.47
SHM1YBR263W ELP3Q02908 557 aaKnown RBP5.88□□□□□ -1.47
SHM1YBR263W GCN5Q03330 439 aa5.88□□□□□ -1.47
SHM1YBR263W ATG16Q03818 150 aa5.88□□□□□ -1.47
SHM1YBR263W SXM1Q04175 944 aaKnown RBP5.88□□□□□ -1.47
SHM1YBR263W VAC14Q06708 880 aa5.88□□□□□ -1.47
SHM1YBR263W FMP25Q08023 583 aa5.88□□□□□ -1.47
SHM1YBR263W YPQ1Q12010 308 aa5.88□□□□□ -1.47
SHM1YBR263W SPE3Q12074 293 aaKnown RBP5.88□□□□□ -1.47
SHM1YBR263W TRX1P22217 103 aaKnown RBP5.87□□□□□ -1.47
SHM1YBR263W SEC1P30619 724 aaKnown RBP5.87□□□□□ -1.47
SHM1YBR263W SRB4P32569 687 aa5.87□□□□□ -1.47
SHM1YBR263W HSL7P38274 827 aa5.87□□□□□ -1.47
SHM1YBR263W SFB3P38810 929 aa5.87□□□□□ -1.47
SHM1YBR263W NMD3P38861 518 aaKnown RBP5.87□□□□□ -1.47
SHM1YBR263W BTT1P40314 149 aaPredicted RBP5.87□□□□□ -1.47
SHM1YBR263W UTP8P53276 713 aaKnown RBP5.87□□□□□ -1.47
SHM1YBR263W MTD1Q02046 320 aaKnown RBP5.87□□□□□ -1.47
SHM1YBR263W RSC4Q02206 625 aa5.87□□□□□ -1.47
SHM1YBR263W SML1Q04964 104 aa5.87□□□□□ -1.47
SHM1YBR263W SGO1Q08490 590 aa5.87□□□□□ -1.47
SHM1YBR263W APC5Q08683 685 aa5.87□□□□□ -1.47
SHM1YBR263W DAP1Q12091 152 aa5.87□□□□□ -1.47
SHM1YBR263W LCB4Q12246 624 aa5.87□□□□□ -1.47
SHM1YBR263W NDJ1Q12366 352 aa5.87□□□□□ -1.47
SHM1YBR263W VPS5Q92331 675 aa5.87□□□□□ -1.47
SHM1YBR263W DFG16Q99234 619 aa5.87□□□□□ -1.47
SHM1YBR263W YMR084WA2P2R3 262 aa5.86□□□□□ -1.47
SHM1YBR263W YLR462WO13556 202 aa5.86□□□□□ -1.47
SHM1YBR263W GFA1P14742 717 aaKnown RBP5.86□□□□□ -1.47
SHM1YBR263W NPR1P22211 790 aa5.86□□□□□ -1.47
SHM1YBR263W PEX34P25584 144 aa5.86□□□□□ -1.47
SHM1YBR263W SWC5P38326 303 aa5.86□□□□□ -1.47
SHM1YBR263W RIM11P38615 370 aa5.86□□□□□ -1.47
SHM1YBR263W RCK2P38623 610 aa5.86□□□□□ -1.47
SHM1YBR263W YHL049CP38722 271 aa5.86□□□□□ -1.47
SHM1YBR263W PMC1P38929 1173 aaPredicted RBP5.86□□□□□ -1.47
SHM1YBR263W SPC72P39723 622 aa5.86□□□□□ -1.47
SHM1YBR263W LCP5P40079 357 aaPredicted RBP5.86□□□□□ -1.47
SHM1YBR263W YIL054WP40524 105 aa5.86□□□□□ -1.47
SHM1YBR263W YFL064CP43540 174 aa5.86□□□□□ -1.47
SHM1YBR263W ECL1P48235 211 aa5.86□□□□□ -1.47
SHM1YBR263W SPG3Q04398 127 aaPredicted RBP5.86□□□□□ -1.47
SHM1YBR263W BSP1Q06604 576 aa5.86□□□□□ -1.47
SHM1YBR263W THI20Q08224 551 aa5.86□□□□□ -1.47
SHM1YBR263W YLL054CQ12244 843 aa5.86□□□□□ -1.47
SHM1YBR263W RRD2Q12461 358 aa5.86□□□□□ -1.47
SHM1YBR263W CMR1Q12510 522 aaKnown RBP5.86□□□□□ -1.47
SHM1YBR263W YBL111CQ3E7Y5 667 aa5.86□□□□□ -1.47
SHM1YBR263W MTF1P14908 341 aaKnown RBP5.85□□□□□ -1.47
SHM1YBR263W CAP1P28495 268 aaKnown RBP5.85□□□□□ -1.47
SHM1YBR263W PAP1P29468 568 aaKnown RBP5.85□□□□□ -1.47
SHM1YBR263W YBL055CP34220 418 aaPredicted RBP5.85□□□□□ -1.47
SHM1YBR263W LYS9P38999 446 aa5.85□□□□□ -1.47
SHM1YBR263W NUP60P39705 539 aa5.85□□□□□ -1.47
SHM1YBR263W TMA108P40462 946 aa5.85□□□□□ -1.47
SHM1YBR263W GCV1P48015 400 aa5.85□□□□□ -1.47
SHM1YBR263W PSP1P50896 841 aaKnown RBP5.85□□□□□ -1.47
SHM1YBR263W YGR283CP53336 341 aaPredicted RBP5.85□□□□□ -1.47
SHM1YBR263W NOG2P53742 486 aaKnown RBP5.85□□□□□ -1.47
SHM1YBR263W YNL144CP53907 740 aa5.85□□□□□ -1.47
SHM1YBR263W CDC55Q00362 526 aa5.85□□□□□ -1.47
SHM1YBR263W YMR114CQ04471 368 aaKnown RBP5.85□□□□□ -1.47
SHM1YBR263W UFO1Q04511 668 aa5.85□□□□□ -1.47
SHM1YBR263W AIM32Q04689 311 aa5.85□□□□□ -1.47
SHM1YBR263W IVY1Q04934 453 aa5.85□□□□□ -1.47
SHM1YBR263W YIG1Q08956 461 aa5.85□□□□□ -1.47
SHM1YBR263W ARP7Q12406 477 aa5.85□□□□□ -1.47
SHM1YBR263W PAB1P04147 577 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
SHM1YBR263W HTS1P07263 546 aaKnown RBP5.84□□□□□ -1.47
SHM1YBR263W PPH22P23595 377 aa5.84□□□□□ -1.47
SHM1YBR263W DUG2P38149 878 aa5.84□□□□□ -1.47
SHM1YBR263W SMF1P38925 575 aa5.84□□□□□ -1.47
SHM1YBR263W ERP2P39704 215 aa5.84□□□□□ -1.47
SHM1YBR263W KHA1P40309 873 aa5.84□□□□□ -1.47
SHM1YBR263W KTR6P54070 446 aa5.84□□□□□ -1.47
SHM1YBR263W PMT7Q06644 662 aa5.84□□□□□ -1.47
SHM1YBR263W CIR2Q08822 631 aa5.84□□□□□ -1.47
SHM1YBR263W SPO21Q12411 609 aa5.84□□□□□ -1.47
SHM1YBR263W RAD10P06838 210 aa5.83□□□□□ -1.48
SHM1YBR263W YPK1P12688 680 aaKnown RBP5.83□□□□□ -1.48
SHM1YBR263W SFL1P20134 766 aa5.83□□□□□ -1.48
SHM1YBR263W YIH1P25637 258 aa5.83□□□□□ -1.48
SHM1YBR263W HSP78P33416 811 aa5.83□□□□□ -1.48
SHM1YBR263W RDH54P38086 958 aa5.83□□□□□ -1.48
SHM1YBR263W ECM13P38195 257 aa5.83□□□□□ -1.48
SHM1YBR263W SAP185P40856 1058 aa5.83□□□□□ -1.48
SHM1YBR263W YNL040WP53960 456 aaPredicted RBP5.83□□□□□ -1.48
SHM1YBR263W LEE1Q02799 301 aaKnown RBP5.83□□□□□ -1.48
SHM1YBR263W PIR3Q03180 325 aa5.83□□□□□ -1.48
SHM1YBR263W POB3Q04636 552 aaKnown RBP5.83□□□□□ -1.48
SHM1YBR263W KAP95Q06142 861 aaKnown RBP5.83□□□□□ -1.48
SHM1YBR263W THI21Q08975 551 aa5.83□□□□□ -1.48
SHM1YBR263W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SHM1YBR263W LPX1Q12405 387 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms