RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Prr12E9PYL2 2035 aaKnown RBP9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Cdkn1aP39689 159 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Pcnx2Q5DU28 2122 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 C1qtnf5Q8K479 243 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Vmn1r70Q8R254 298 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Iqcf6G3UWF2 157 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Saa3P04918 122 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 GrnP28798 589 aaKnown RBP9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Defa23Q5G866 93 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Pom121l2Q5SW25 972 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Klhdc1Q80YG3 406 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ca5aP23589 299 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Q8BG31 207 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ca1P13634 261 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Cdkn2aQ64364 169 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Tmem129Q8K304 362 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Olfr975Q8VG91 310 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Lsm4Q9QXA5 137 aaKnown RBP9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Timm10bQ9WV96 100 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Arid2E9Q7E2 1828 aa9.56□□□□□ -0.88
Ndc1-204ENSMUST00000139560 MrapQ9D159 127 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm9513B3GLJ6 99 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Cited2O35740 269 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 NdpP48744 131 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Sumo2P61957 95 aaKnown RBP9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Smim6Q3U0I6 56 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 ElaneQ3UP87 265 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Olfr211Q8VGH2 309 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ighv1-76A0A0G2JFE9 117 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 PdpnQ62011 172 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Olfr433Q7TRV9 314 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Fam168aQ8BGZ2 244 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Rnf166Q3U9F6 237 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Trdv4Q5R1A3 115 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm1553Q66VB7 94 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ss18l1Q8BW22 402 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gpr82Q8BZR0 328 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Klhdc3Q8VEM9 382 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 1700008P02RikQ9DAJ8 175 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 CompQ9R0G6 755 aa9.55□□□□□ -0.88
Ndc1-204ENSMUST00000139560 P01792 123 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Avpi1Q9D7H4 142 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Brca2P97929 3329 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Chac1Q8R3J5 223 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Fbln5Q9WVH9 448 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm27027S4R1M6 97 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 DysfQ9ESD7 2090 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Wisp3D3Z5L9 354 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 P01723 117 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Olfr553Q7TRS6 326 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Atp5lQ9CPQ8 103 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Cbln3Q9JHG0 197 aa9.54□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Vamp8O70404 101 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Rps20P60867 119 aaKnown RBP9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Cks1bP61025 79 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Immp1lQ9CQU8 166 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Tet1Q3URK3 2007 aaKnown RBP9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ucp1P12242 307 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Prdm6Q3UZD5 596 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Prima1Q810F0 153 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Olfr1367Q8VFG2 316 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ighv6-7A0A0A6YWU3 119 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Znf385cA2A5E6 429 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm10881P01642 115 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Spata45Q9CVW4 97 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Slc25a39Q9D8K8 359 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gtsf1Q9DAN6 167 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm29666A0A087WQ99 126 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ighv1-37A0A0A6YW32 117 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ighv8-2A0A0A6YW58 119 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ighv8-6A0A0A6YXA3 118 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Mllt11P97783 90 aa9.53□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Tmem141A2AJB2 108 aa9.52□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ear14F6YUX7 155 aa9.52□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Cxcl13O55038 109 aa9.52□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Vmn1r197Q8R265 298 aa9.52□□□□□ -0.88
Ndc1-204ENSMUST00000139560 VsirQ9D659 308 aa9.52□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Plxna4Q80UG2 1893 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 DmdP11531 3678 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 NgfP01139 241 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Dlx6P70397 175 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Znf691Q3TDE8 283 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Pf4Q9Z126 105 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Pcnx3Q8VI59 2028 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Folr2Q05685 251 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Rbfox3Q8BIF2 374 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Tusc5Q8C838 173 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 QrfpQ8CE23 124 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Arpc1aQ9R0Q6 370 aa9.52□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Inafm1E9PV59 130 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Gm20825J3QM67 227 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 P01655 112 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 P03980 138 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 P04219 140 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Klk1b22P15948 259 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Ssty2Q149W4 227 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Olfr761Q7TRJ0 323 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Igkv12-89A0A0G2JGW8 112 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Col8a2P25318 699 aa9.51□□□□□ -0.89
Ndc1-204ENSMUST00000139560 Klf14Q19A41 325 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms