Protein–RNA interactions for Protein: Q9JHG0

Cbln3, Cerebellin-3, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbln3Q9JHG0 Gm25239-201ENSMUST00000174915 86 ntBASIC30.58■■■□□ 2.49
Cbln3Q9JHG0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cbln3Q9JHG0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Cbln3Q9JHG0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Cbln3Q9JHG0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Cbln3Q9JHG0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cbln3Q9JHG0 Gm15042-201ENSMUST00000120212 883 ntBASIC26.73■■□□□ 1.87
Cbln3Q9JHG0 Psd-208ENSMUST00000224556 2034 ntBASIC26.67■■□□□ 1.86
Cbln3Q9JHG0 Gm24109-201ENSMUST00000175489 103 ntBASIC26.53■■□□□ 1.84
Cbln3Q9JHG0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cbln3Q9JHG0 Gm15045-201ENSMUST00000117359 883 ntBASIC26.19■■□□□ 1.78
Cbln3Q9JHG0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Cbln3Q9JHG0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Cbln3Q9JHG0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cbln3Q9JHG0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cbln3Q9JHG0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cbln3Q9JHG0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Cbln3Q9JHG0 Gm23366-201ENSMUST00000175022 89 ntBASIC25.57■■□□□ 1.68
Cbln3Q9JHG0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.54■■□□□ 1.68
Cbln3Q9JHG0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cbln3Q9JHG0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cbln3Q9JHG0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cbln3Q9JHG0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cbln3Q9JHG0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Cbln3Q9JHG0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Cbln3Q9JHG0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cbln3Q9JHG0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cbln3Q9JHG0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cbln3Q9JHG0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cbln3Q9JHG0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Cbln3Q9JHG0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cbln3Q9JHG0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cbln3Q9JHG0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.88■■□□□ 1.57
Cbln3Q9JHG0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cbln3Q9JHG0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cbln3Q9JHG0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.79■■□□□ 1.56
Cbln3Q9JHG0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Cbln3Q9JHG0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Cbln3Q9JHG0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Cbln3Q9JHG0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cbln3Q9JHG0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.59■■□□□ 1.53
Cbln3Q9JHG0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.58■■□□□ 1.53
Cbln3Q9JHG0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
Cbln3Q9JHG0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cbln3Q9JHG0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cbln3Q9JHG0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cbln3Q9JHG0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cbln3Q9JHG0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.26■■□□□ 1.47
Cbln3Q9JHG0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cbln3Q9JHG0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cbln3Q9JHG0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.23■■□□□ 1.47
Cbln3Q9JHG0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cbln3Q9JHG0 Gm25238-201ENSMUST00000174914 89 ntBASIC24.15■■□□□ 1.46
Cbln3Q9JHG0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.15■■□□□ 1.46
Cbln3Q9JHG0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cbln3Q9JHG0 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.96■■□□□ 1.43
Cbln3Q9JHG0 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.93■■□□□ 1.42
Cbln3Q9JHG0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cbln3Q9JHG0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.89■■□□□ 1.41
Cbln3Q9JHG0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cbln3Q9JHG0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cbln3Q9JHG0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cbln3Q9JHG0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cbln3Q9JHG0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cbln3Q9JHG0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cbln3Q9JHG0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cbln3Q9JHG0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
Cbln3Q9JHG0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Cbln3Q9JHG0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cbln3Q9JHG0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cbln3Q9JHG0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Cbln3Q9JHG0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cbln3Q9JHG0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cbln3Q9JHG0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.54■■□□□ 1.36
Cbln3Q9JHG0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cbln3Q9JHG0 Gm27325-201ENSMUST00000175467 74 ntBASIC23.49■■□□□ 1.35
Cbln3Q9JHG0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cbln3Q9JHG0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cbln3Q9JHG0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Cbln3Q9JHG0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.43■■□□□ 1.34
Cbln3Q9JHG0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Cbln3Q9JHG0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.41■■□□□ 1.34
Cbln3Q9JHG0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cbln3Q9JHG0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.39■■□□□ 1.34
Cbln3Q9JHG0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Cbln3Q9JHG0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cbln3Q9JHG0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.3■■□□□ 1.32
Cbln3Q9JHG0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cbln3Q9JHG0 Gm25262-201ENSMUST00000174934 133 ntBASIC23.26■■□□□ 1.31
Cbln3Q9JHG0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cbln3Q9JHG0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cbln3Q9JHG0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cbln3Q9JHG0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cbln3Q9JHG0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cbln3Q9JHG0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cbln3Q9JHG0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cbln3Q9JHG0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Cbln3Q9JHG0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cbln3Q9JHG0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cbln3Q9JHG0 Rab21-202ENSMUST00000218831 843 ntBASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms