Protein–RNA interactions for Protein: P04918

Saa3, Serum amyloid A-3 protein, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Saa3P04918 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Saa3P04918 Gm25239-201ENSMUST00000174915 86 ntBASIC25.85■■□□□ 1.73
Saa3P04918 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Saa3P04918 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Saa3P04918 Psd-208ENSMUST00000224556 2034 ntBASIC24.54■■□□□ 1.52
Saa3P04918 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Saa3P04918 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Saa3P04918 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Saa3P04918 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Saa3P04918 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Saa3P04918 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Saa3P04918 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Saa3P04918 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Saa3P04918 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Saa3P04918 Gm15042-201ENSMUST00000120212 883 ntBASIC23.31■■□□□ 1.32
Saa3P04918 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Saa3P04918 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.24■■□□□ 1.31
Saa3P04918 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Saa3P04918 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Saa3P04918 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Saa3P04918 Gm15045-201ENSMUST00000117359 883 ntBASIC22.93■■□□□ 1.26
Saa3P04918 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Saa3P04918 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Saa3P04918 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Saa3P04918 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Saa3P04918 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Saa3P04918 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Saa3P04918 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Saa3P04918 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Saa3P04918 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Saa3P04918 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.49■■□□□ 1.19
Saa3P04918 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Saa3P04918 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.41■■□□□ 1.18
Saa3P04918 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.38■■□□□ 1.17
Saa3P04918 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Saa3P04918 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Saa3P04918 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Saa3P04918 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.15■■□□□ 1.14
Saa3P04918 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Saa3P04918 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Saa3P04918 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Saa3P04918 Gm24109-201ENSMUST00000175489 103 ntBASIC22.08■■□□□ 1.13
Saa3P04918 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.08■■□□□ 1.12
Saa3P04918 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22■■□□□ 1.11
Saa3P04918 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Saa3P04918 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Saa3P04918 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.89■■□□□ 1.09
Saa3P04918 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Saa3P04918 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Saa3P04918 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Saa3P04918 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Saa3P04918 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Saa3P04918 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Saa3P04918 Gm23366-201ENSMUST00000175022 89 ntBASIC21.68■■□□□ 1.06
Saa3P04918 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Saa3P04918 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Saa3P04918 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Saa3P04918 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Saa3P04918 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Saa3P04918 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Saa3P04918 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Saa3P04918 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.51■■□□□ 1.03
Saa3P04918 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Saa3P04918 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Saa3P04918 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Saa3P04918 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.41■■□□□ 1.02
Saa3P04918 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Saa3P04918 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Saa3P04918 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Saa3P04918 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Saa3P04918 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.33■■□□□ 1
Saa3P04918 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Saa3P04918 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Saa3P04918 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Saa3P04918 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Saa3P04918 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Saa3P04918 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Saa3P04918 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Saa3P04918 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Saa3P04918 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Saa3P04918 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Saa3P04918 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Saa3P04918 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Saa3P04918 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Saa3P04918 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Saa3P04918 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Saa3P04918 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Saa3P04918 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Saa3P04918 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Saa3P04918 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Saa3P04918 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Saa3P04918 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Saa3P04918 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Saa3P04918 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Saa3P04918 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Saa3P04918 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.78■□□□□ 0.92
Saa3P04918 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.77■□□□□ 0.92
Saa3P04918 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Saa3P04918 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Saa3P04918 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms