Protein–RNA interactions for Protein: A0A0G2JFE9

Ighv1-76, Immunoglobulin heavy variable 1-76 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-76A0A0G2JFE9 Gm25239-201ENSMUST00000174915 86 ntBASIC31,57■■■□□ 2,64
Ighv1-76A0A0G2JFE9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,34
Ighv1-76A0A0G2JFE9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,93■■■□□ 2,22
Ighv1-76A0A0G2JFE9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,91■■■□□ 2,22
Ighv1-76A0A0G2JFE9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,74■■■□□ 2,19
Ighv1-76A0A0G2JFE9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Ighv1-76A0A0G2JFE9 Gm15042-201ENSMUST00000120212 883 ntBASIC28,1■■■□□ 2,09
Ighv1-76A0A0G2JFE9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27,64■■■□□ 2,02
Ighv1-76A0A0G2JFE9 Psd-208ENSMUST00000224556 2034 ntBASIC27,62■■■□□ 2,01
Ighv1-76A0A0G2JFE9 Gm15045-201ENSMUST00000117359 883 ntBASIC27,58■■■□□ 2,01
Ighv1-76A0A0G2JFE9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,16■■□□□ 1,94
Ighv1-76A0A0G2JFE9 Gm24109-201ENSMUST00000175489 103 ntBASIC27,14■■□□□ 1,94
Ighv1-76A0A0G2JFE9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,12■■□□□ 1,93
Ighv1-76A0A0G2JFE9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,1■■□□□ 1,93
Ighv1-76A0A0G2JFE9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,04■■□□□ 1,92
Ighv1-76A0A0G2JFE9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Ighv1-76A0A0G2JFE9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,62■■□□□ 1,85
Ighv1-76A0A0G2JFE9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26,58■■□□□ 1,85
Ighv1-76A0A0G2JFE9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Ighv1-76A0A0G2JFE9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26,55■■□□□ 1,84
Ighv1-76A0A0G2JFE9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
Ighv1-76A0A0G2JFE9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,48■■□□□ 1,83
Ighv1-76A0A0G2JFE9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Ighv1-76A0A0G2JFE9 Gm23366-201ENSMUST00000175022 89 ntBASIC26,45■■□□□ 1,82
Ighv1-76A0A0G2JFE9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,43■■□□□ 1,82
Ighv1-76A0A0G2JFE9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26,38■■□□□ 1,81
Ighv1-76A0A0G2JFE9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26,3■■□□□ 1,8
Ighv1-76A0A0G2JFE9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Ighv1-76A0A0G2JFE9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,28■■□□□ 1,8
Ighv1-76A0A0G2JFE9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26,26■■□□□ 1,79
Ighv1-76A0A0G2JFE9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,17■■□□□ 1,78
Ighv1-76A0A0G2JFE9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,14■■□□□ 1,77
Ighv1-76A0A0G2JFE9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26,1■■□□□ 1,77
Ighv1-76A0A0G2JFE9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
Ighv1-76A0A0G2JFE9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26,03■■□□□ 1,76
Ighv1-76A0A0G2JFE9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Ighv1-76A0A0G2JFE9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,84■■□□□ 1,73
Ighv1-76A0A0G2JFE9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,75■■□□□ 1,71
Ighv1-76A0A0G2JFE9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,73■■□□□ 1,71
Ighv1-76A0A0G2JFE9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25,69■■□□□ 1,7
Ighv1-76A0A0G2JFE9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,68■■□□□ 1,7
Ighv1-76A0A0G2JFE9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25,59■■□□□ 1,69
Ighv1-76A0A0G2JFE9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,44■■□□□ 1,66
Ighv1-76A0A0G2JFE9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Ighv1-76A0A0G2JFE9 Gm10524-201ENSMUST00000181931 1893 ntBASIC25,41■■□□□ 1,66
Ighv1-76A0A0G2JFE9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,39■■□□□ 1,66
Ighv1-76A0A0G2JFE9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25,36■■□□□ 1,65
Ighv1-76A0A0G2JFE9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Ighv1-76A0A0G2JFE9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25,17■■□□□ 1,62
Ighv1-76A0A0G2JFE9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Ighv1-76A0A0G2JFE9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Ighv1-76A0A0G2JFE9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25,08■■□□□ 1,61
Ighv1-76A0A0G2JFE9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25,02■■□□□ 1,6
Ighv1-76A0A0G2JFE9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25,02■■□□□ 1,6
Ighv1-76A0A0G2JFE9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
Ighv1-76A0A0G2JFE9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24,9■■□□□ 1,58
Ighv1-76A0A0G2JFE9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24,89■■□□□ 1,57
Ighv1-76A0A0G2JFE9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24,86■■□□□ 1,57
Ighv1-76A0A0G2JFE9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,84■■□□□ 1,57
Ighv1-76A0A0G2JFE9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,84■■□□□ 1,57
Ighv1-76A0A0G2JFE9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24,81■■□□□ 1,56
Ighv1-76A0A0G2JFE9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24,79■■□□□ 1,56
Ighv1-76A0A0G2JFE9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24,78■■□□□ 1,56
Ighv1-76A0A0G2JFE9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24,78■■□□□ 1,56
Ighv1-76A0A0G2JFE9 Gm25238-201ENSMUST00000174914 89 ntBASIC24,75■■□□□ 1,55
Ighv1-76A0A0G2JFE9 Gm42596-201ENSMUST00000196305 1958 ntBASIC24,74■■□□□ 1,55
Ighv1-76A0A0G2JFE9 Gm27325-201ENSMUST00000175467 74 ntBASIC24,74■■□□□ 1,55
Ighv1-76A0A0G2JFE9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24,73■■□□□ 1,55
Ighv1-76A0A0G2JFE9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,69■■□□□ 1,54
Ighv1-76A0A0G2JFE9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,69■■□□□ 1,54
Ighv1-76A0A0G2JFE9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24,55■■□□□ 1,52
Ighv1-76A0A0G2JFE9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Ighv1-76A0A0G2JFE9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24,52■■□□□ 1,52
Ighv1-76A0A0G2JFE9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24,52■■□□□ 1,52
Ighv1-76A0A0G2JFE9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24,51■■□□□ 1,51
Ighv1-76A0A0G2JFE9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Ighv1-76A0A0G2JFE9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Ighv1-76A0A0G2JFE9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Ighv1-76A0A0G2JFE9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24,36■■□□□ 1,49
Ighv1-76A0A0G2JFE9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24,35■■□□□ 1,49
Ighv1-76A0A0G2JFE9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Ighv1-76A0A0G2JFE9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24,32■■□□□ 1,48
Ighv1-76A0A0G2JFE9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24,29■■□□□ 1,48
Ighv1-76A0A0G2JFE9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24,28■■□□□ 1,48
Ighv1-76A0A0G2JFE9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
Ighv1-76A0A0G2JFE9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
Ighv1-76A0A0G2JFE9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24,25■■□□□ 1,47
Ighv1-76A0A0G2JFE9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24,22■■□□□ 1,47
Ighv1-76A0A0G2JFE9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Ighv1-76A0A0G2JFE9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24,19■■□□□ 1,46
Ighv1-76A0A0G2JFE9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Ighv1-76A0A0G2JFE9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24,16■■□□□ 1,46
Ighv1-76A0A0G2JFE9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24,16■■□□□ 1,46
Ighv1-76A0A0G2JFE9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24,16■■□□□ 1,46
Ighv1-76A0A0G2JFE9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Ighv1-76A0A0G2JFE9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24,04■■□□□ 1,44
Ighv1-76A0A0G2JFE9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Ighv1-76A0A0G2JFE9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24,01■■□□□ 1,43
Ighv1-76A0A0G2JFE9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24,01■■□□□ 1,43
Ighv1-76A0A0G2JFE9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23,98■■□□□ 1,43
Retrieved 100 of 76,532 protein–RNA pairs in 13,4 ms