Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm25239-201ENSMUST00000174915 86 ntBASIC23.08■■□□□ 1.29
Cks1bP61025 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cks1bP61025 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cks1bP61025 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cks1bP61025 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cks1bP61025 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cks1bP61025 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Cks1bP61025 Psd-208ENSMUST00000224556 2034 ntBASIC21.52■■□□□ 1.04
Cks1bP61025 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cks1bP61025 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cks1bP61025 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cks1bP61025 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cks1bP61025 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cks1bP61025 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cks1bP61025 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cks1bP61025 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cks1bP61025 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cks1bP61025 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cks1bP61025 Gm15042-201ENSMUST00000120212 883 ntBASIC20.82■□□□□ 0.92
Cks1bP61025 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cks1bP61025 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cks1bP61025 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cks1bP61025 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cks1bP61025 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cks1bP61025 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.59■□□□□ 0.89
Cks1bP61025 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cks1bP61025 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cks1bP61025 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cks1bP61025 Gm15045-201ENSMUST00000117359 883 ntBASIC20.37■□□□□ 0.85
Cks1bP61025 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cks1bP61025 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cks1bP61025 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cks1bP61025 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cks1bP61025 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cks1bP61025 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cks1bP61025 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cks1bP61025 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cks1bP61025 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cks1bP61025 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cks1bP61025 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cks1bP61025 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cks1bP61025 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cks1bP61025 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cks1bP61025 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cks1bP61025 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cks1bP61025 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cks1bP61025 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cks1bP61025 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.95■□□□□ 0.78
Cks1bP61025 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.94■□□□□ 0.78
Cks1bP61025 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.93■□□□□ 0.78
Cks1bP61025 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.9■□□□□ 0.78
Cks1bP61025 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cks1bP61025 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cks1bP61025 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cks1bP61025 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.72■□□□□ 0.75
Cks1bP61025 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cks1bP61025 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.67■□□□□ 0.74
Cks1bP61025 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cks1bP61025 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cks1bP61025 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.65■□□□□ 0.74
Cks1bP61025 Gm24109-201ENSMUST00000175489 103 ntBASIC19.64■□□□□ 0.73
Cks1bP61025 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cks1bP61025 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cks1bP61025 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.59■□□□□ 0.73
Cks1bP61025 Zxda-201ENSMUST00000117281 2621 ntBASIC19.58■□□□□ 0.72
Cks1bP61025 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cks1bP61025 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cks1bP61025 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cks1bP61025 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cks1bP61025 Gm23366-201ENSMUST00000175022 89 ntBASIC19.44■□□□□ 0.7
Cks1bP61025 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cks1bP61025 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cks1bP61025 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.43■□□□□ 0.7
Cks1bP61025 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cks1bP61025 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cks1bP61025 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cks1bP61025 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cks1bP61025 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cks1bP61025 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.33■□□□□ 0.68
Cks1bP61025 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cks1bP61025 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cks1bP61025 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cks1bP61025 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cks1bP61025 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cks1bP61025 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cks1bP61025 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cks1bP61025 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.15■□□□□ 0.66
Cks1bP61025 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cks1bP61025 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cks1bP61025 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cks1bP61025 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cks1bP61025 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cks1bP61025 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.09■□□□□ 0.65
Cks1bP61025 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cks1bP61025 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cks1bP61025 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cks1bP61025 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cks1bP61025 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cks1bP61025 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cks1bP61025 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms