Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm25239-201ENSMUST00000174915 86 ntBASIC32,79■■■□□ 2,84
Cxcl13O55038 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30,28■■■□□ 2,44
Cxcl13O55038 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29,89■■■□□ 2,38
Cxcl13O55038 Gm15042-201ENSMUST00000120212 883 ntBASIC28,74■■■□□ 2,19
Cxcl13O55038 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Cxcl13O55038 Gm24109-201ENSMUST00000175489 103 ntBASIC28,36■■■□□ 2,13
Cxcl13O55038 Gm15045-201ENSMUST00000117359 883 ntBASIC28,09■■■□□ 2,09
Cxcl13O55038 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,91■■■□□ 2,06
Cxcl13O55038 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,86■■■□□ 2,05
Cxcl13O55038 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27,67■■■□□ 2,02
Cxcl13O55038 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27,55■■■□□ 2
Cxcl13O55038 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27,51■■□□□ 1,99
Cxcl13O55038 Gm23366-201ENSMUST00000175022 89 ntBASIC27,42■■□□□ 1,98
Cxcl13O55038 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27,26■■□□□ 1,95
Cxcl13O55038 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Cxcl13O55038 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,8■■□□□ 1,88
Cxcl13O55038 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26,68■■□□□ 1,86
Cxcl13O55038 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26,58■■□□□ 1,85
Cxcl13O55038 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26,51■■□□□ 1,83
Cxcl13O55038 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Cxcl13O55038 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26,43■■□□□ 1,82
Cxcl13O55038 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Cxcl13O55038 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26,28■■□□□ 1,8
Cxcl13O55038 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26,26■■□□□ 1,79
Cxcl13O55038 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26,25■■□□□ 1,79
Cxcl13O55038 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,25■■□□□ 1,79
Cxcl13O55038 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,19■■□□□ 1,78
Cxcl13O55038 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26,16■■□□□ 1,78
Cxcl13O55038 Psd-208ENSMUST00000224556 2034 ntBASIC26,15■■□□□ 1,78
Cxcl13O55038 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,1■■□□□ 1,77
Cxcl13O55038 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Cxcl13O55038 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25,97■■□□□ 1,75
Cxcl13O55038 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25,95■■□□□ 1,74
Cxcl13O55038 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25,95■■□□□ 1,74
Cxcl13O55038 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25,87■■□□□ 1,73
Cxcl13O55038 Gm25238-201ENSMUST00000174914 89 ntBASIC25,85■■□□□ 1,73
Cxcl13O55038 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,7
Cxcl13O55038 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25,66■■□□□ 1,7
Cxcl13O55038 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Cxcl13O55038 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,43■■□□□ 1,66
Cxcl13O55038 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Cxcl13O55038 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25,39■■□□□ 1,66
Cxcl13O55038 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Cxcl13O55038 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25,29■■□□□ 1,64
Cxcl13O55038 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25,2■■□□□ 1,62
Cxcl13O55038 Gm27325-201ENSMUST00000175467 74 ntBASIC25,18■■□□□ 1,62
Cxcl13O55038 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Cxcl13O55038 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25,17■■□□□ 1,62
Cxcl13O55038 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25,14■■□□□ 1,62
Cxcl13O55038 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25,09■■□□□ 1,61
Cxcl13O55038 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,04■■□□□ 1,6
Cxcl13O55038 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25,02■■□□□ 1,6
Cxcl13O55038 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24,99■■□□□ 1,59
Cxcl13O55038 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24,97■■□□□ 1,59
Cxcl13O55038 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
Cxcl13O55038 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,87■■□□□ 1,57
Cxcl13O55038 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,82■■□□□ 1,56
Cxcl13O55038 Gm25262-201ENSMUST00000174934 133 ntBASIC24,77■■□□□ 1,56
Cxcl13O55038 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24,74■■□□□ 1,55
Cxcl13O55038 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,73■■□□□ 1,55
Cxcl13O55038 Rab21-202ENSMUST00000218831 843 ntBASIC24,7■■□□□ 1,54
Cxcl13O55038 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24,7■■□□□ 1,54
Cxcl13O55038 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24,68■■□□□ 1,54
Cxcl13O55038 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24,66■■□□□ 1,54
Cxcl13O55038 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24,65■■□□□ 1,54
Cxcl13O55038 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24,61■■□□□ 1,53
Cxcl13O55038 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24,55■■□□□ 1,52
Cxcl13O55038 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24,55■■□□□ 1,52
Cxcl13O55038 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24,53■■□□□ 1,52
Cxcl13O55038 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24,52■■□□□ 1,52
Cxcl13O55038 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,51■■□□□ 1,51
Cxcl13O55038 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24,49■■□□□ 1,51
Cxcl13O55038 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24,47■■□□□ 1,51
Cxcl13O55038 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
Cxcl13O55038 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
Cxcl13O55038 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,42■■□□□ 1,5
Cxcl13O55038 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24,41■■□□□ 1,5
Cxcl13O55038 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,5
Cxcl13O55038 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24,38■■□□□ 1,49
Cxcl13O55038 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24,35■■□□□ 1,49
Cxcl13O55038 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24,32■■□□□ 1,48
Cxcl13O55038 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24,32■■□□□ 1,48
Cxcl13O55038 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24,31■■□□□ 1,48
Cxcl13O55038 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24,27■■□□□ 1,48
Cxcl13O55038 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24,26■■□□□ 1,47
Cxcl13O55038 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24,24■■□□□ 1,47
Cxcl13O55038 Gm42596-201ENSMUST00000196305 1958 ntBASIC24,2■■□□□ 1,46
Cxcl13O55038 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24,18■■□□□ 1,46
Cxcl13O55038 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24,18■■□□□ 1,46
Cxcl13O55038 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24,17■■□□□ 1,46
Cxcl13O55038 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,16■■□□□ 1,46
Cxcl13O55038 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24,13■■□□□ 1,45
Cxcl13O55038 Gm26115-201ENSMUST00000175605 87 ntBASIC24,11■■□□□ 1,45
Cxcl13O55038 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24,1■■□□□ 1,45
Cxcl13O55038 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24,1■■□□□ 1,45
Cxcl13O55038 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Cxcl13O55038 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,06■■□□□ 1,44
Cxcl13O55038 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24,03■■□□□ 1,44
Cxcl13O55038 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24,03■■□□□ 1,44
Cxcl13O55038 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24,01■■□□□ 1,43
Retrieved 100 of 76,532 protein–RNA pairs in 13,2 ms