Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm25239-201ENSMUST00000174915 86 ntBASIC31.61■■■□□ 2.65
Cdkn1aP39689 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Cdkn1aP39689 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cdkn1aP39689 Gm15042-201ENSMUST00000120212 883 ntBASIC27.73■■■□□ 2.03
Cdkn1aP39689 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Cdkn1aP39689 Gm24109-201ENSMUST00000175489 103 ntBASIC27.32■■□□□ 1.96
Cdkn1aP39689 Gm15045-201ENSMUST00000117359 883 ntBASIC27.1■■□□□ 1.93
Cdkn1aP39689 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cdkn1aP39689 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cdkn1aP39689 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Cdkn1aP39689 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cdkn1aP39689 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Cdkn1aP39689 Gm23366-201ENSMUST00000175022 89 ntBASIC26.42■■□□□ 1.82
Cdkn1aP39689 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cdkn1aP39689 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cdkn1aP39689 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cdkn1aP39689 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.83■■□□□ 1.73
Cdkn1aP39689 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cdkn1aP39689 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cdkn1aP39689 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Cdkn1aP39689 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.47■■□□□ 1.67
Cdkn1aP39689 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cdkn1aP39689 Psd-208ENSMUST00000224556 2034 ntBASIC25.44■■□□□ 1.66
Cdkn1aP39689 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cdkn1aP39689 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cdkn1aP39689 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cdkn1aP39689 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cdkn1aP39689 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.33■■□□□ 1.65
Cdkn1aP39689 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.24■■□□□ 1.63
Cdkn1aP39689 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
Cdkn1aP39689 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cdkn1aP39689 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cdkn1aP39689 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cdkn1aP39689 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cdkn1aP39689 Gm25238-201ENSMUST00000174914 89 ntBASIC24.9■■□□□ 1.58
Cdkn1aP39689 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.89■■□□□ 1.58
Cdkn1aP39689 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.84■■□□□ 1.57
Cdkn1aP39689 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cdkn1aP39689 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cdkn1aP39689 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cdkn1aP39689 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cdkn1aP39689 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cdkn1aP39689 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cdkn1aP39689 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
Cdkn1aP39689 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.39■■□□□ 1.5
Cdkn1aP39689 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.37■■□□□ 1.49
Cdkn1aP39689 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cdkn1aP39689 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdkn1aP39689 Gm27325-201ENSMUST00000175467 74 ntBASIC24.29■■□□□ 1.48
Cdkn1aP39689 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cdkn1aP39689 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cdkn1aP39689 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.19■■□□□ 1.46
Cdkn1aP39689 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.13■■□□□ 1.45
Cdkn1aP39689 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.08■■□□□ 1.45
Cdkn1aP39689 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cdkn1aP39689 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
Cdkn1aP39689 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.04■■□□□ 1.44
Cdkn1aP39689 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Cdkn1aP39689 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cdkn1aP39689 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cdkn1aP39689 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
Cdkn1aP39689 Gm25262-201ENSMUST00000174934 133 ntBASIC23.82■■□□□ 1.4
Cdkn1aP39689 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdkn1aP39689 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdkn1aP39689 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdkn1aP39689 Rab21-202ENSMUST00000218831 843 ntBASIC23.8■■□□□ 1.4
Cdkn1aP39689 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.79■■□□□ 1.4
Cdkn1aP39689 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdkn1aP39689 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdkn1aP39689 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Cdkn1aP39689 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cdkn1aP39689 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.72■■□□□ 1.39
Cdkn1aP39689 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Cdkn1aP39689 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cdkn1aP39689 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cdkn1aP39689 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cdkn1aP39689 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.63■■□□□ 1.37
Cdkn1aP39689 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cdkn1aP39689 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cdkn1aP39689 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cdkn1aP39689 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.53■■□□□ 1.36
Cdkn1aP39689 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Cdkn1aP39689 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.47■■□□□ 1.35
Cdkn1aP39689 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.47■■□□□ 1.35
Cdkn1aP39689 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cdkn1aP39689 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cdkn1aP39689 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cdkn1aP39689 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.39■■□□□ 1.33
Cdkn1aP39689 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.35■■□□□ 1.33
Cdkn1aP39689 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Cdkn1aP39689 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.34■■□□□ 1.33
Cdkn1aP39689 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cdkn1aP39689 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdkn1aP39689 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdkn1aP39689 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdkn1aP39689 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdkn1aP39689 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.21■■□□□ 1.31
Cdkn1aP39689 Gm26115-201ENSMUST00000175605 87 ntBASIC23.19■■□□□ 1.3
Cdkn1aP39689 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdkn1aP39689 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms