Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vamp8O70404 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Vamp8O70404 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Vamp8O70404 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vamp8O70404 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vamp8O70404 Psd-208ENSMUST00000224556 2034 ntBASIC22.82■■□□□ 1.24
Vamp8O70404 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Vamp8O70404 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vamp8O70404 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vamp8O70404 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vamp8O70404 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vamp8O70404 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vamp8O70404 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vamp8O70404 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vamp8O70404 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vamp8O70404 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Vamp8O70404 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vamp8O70404 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vamp8O70404 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vamp8O70404 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vamp8O70404 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vamp8O70404 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vamp8O70404 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.94■□□□□ 0.94
Vamp8O70404 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vamp8O70404 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vamp8O70404 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vamp8O70404 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp8O70404 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.64■□□□□ 0.89
Vamp8O70404 Gm25239-201ENSMUST00000174915 86 ntBASIC20.63■□□□□ 0.89
Vamp8O70404 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vamp8O70404 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.56■□□□□ 0.88
Vamp8O70404 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vamp8O70404 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vamp8O70404 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vamp8O70404 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vamp8O70404 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.45■□□□□ 0.86
Vamp8O70404 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vamp8O70404 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Vamp8O70404 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vamp8O70404 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp8O70404 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp8O70404 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Vamp8O70404 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.2■□□□□ 0.82
Vamp8O70404 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Vamp8O70404 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vamp8O70404 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vamp8O70404 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Vamp8O70404 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vamp8O70404 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vamp8O70404 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vamp8O70404 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.93■□□□□ 0.78
Vamp8O70404 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp8O70404 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Vamp8O70404 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.83■□□□□ 0.77
Vamp8O70404 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vamp8O70404 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vamp8O70404 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.77■□□□□ 0.76
Vamp8O70404 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp8O70404 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp8O70404 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp8O70404 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp8O70404 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp8O70404 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vamp8O70404 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp8O70404 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.69■□□□□ 0.74
Vamp8O70404 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp8O70404 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vamp8O70404 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.67■□□□□ 0.74
Vamp8O70404 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Vamp8O70404 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vamp8O70404 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.64■□□□□ 0.73
Vamp8O70404 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vamp8O70404 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vamp8O70404 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp8O70404 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp8O70404 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.56■□□□□ 0.72
Vamp8O70404 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp8O70404 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vamp8O70404 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vamp8O70404 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vamp8O70404 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp8O70404 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp8O70404 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp8O70404 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp8O70404 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp8O70404 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp8O70404 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vamp8O70404 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Vamp8O70404 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Vamp8O70404 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vamp8O70404 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vamp8O70404 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vamp8O70404 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vamp8O70404 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vamp8O70404 Gm15042-201ENSMUST00000120212 883 ntBASIC19.26■□□□□ 0.67
Vamp8O70404 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vamp8O70404 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.25■□□□□ 0.67
Vamp8O70404 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vamp8O70404 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Vamp8O70404 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms