Protein–RNA interactions for Protein: Q9R0Q6

Arpc1a, Actin-related protein 2/3 complex subunit 1A, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arpc1aQ9R0Q6 Gm25239-201ENSMUST00000174915 86 ntBASIC29,1■■■□□ 2,25
Arpc1aQ9R0Q6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,95■■□□□ 1,91
Arpc1aQ9R0Q6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26,72■■□□□ 1,87
Arpc1aQ9R0Q6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Arpc1aQ9R0Q6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
Arpc1aQ9R0Q6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,05■■□□□ 1,76
Arpc1aQ9R0Q6 Gm15042-201ENSMUST00000120212 883 ntBASIC25,84■■□□□ 1,73
Arpc1aQ9R0Q6 Gm15045-201ENSMUST00000117359 883 ntBASIC25,29■■□□□ 1,64
Arpc1aQ9R0Q6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Arpc1aQ9R0Q6 Gm24109-201ENSMUST00000175489 103 ntBASIC25■■□□□ 1,59
Arpc1aQ9R0Q6 Psd-208ENSMUST00000224556 2034 ntBASIC24,98■■□□□ 1,59
Arpc1aQ9R0Q6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24,93■■□□□ 1,58
Arpc1aQ9R0Q6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24,7■■□□□ 1,54
Arpc1aQ9R0Q6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,66■■□□□ 1,54
Arpc1aQ9R0Q6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,63■■□□□ 1,53
Arpc1aQ9R0Q6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24,53■■□□□ 1,52
Arpc1aQ9R0Q6 Gm23366-201ENSMUST00000175022 89 ntBASIC24,39■■□□□ 1,49
Arpc1aQ9R0Q6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24,37■■□□□ 1,49
Arpc1aQ9R0Q6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,3■■□□□ 1,48
Arpc1aQ9R0Q6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Arpc1aQ9R0Q6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,23■■□□□ 1,47
Arpc1aQ9R0Q6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Arpc1aQ9R0Q6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,2■■□□□ 1,46
Arpc1aQ9R0Q6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,16■■□□□ 1,46
Arpc1aQ9R0Q6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24,15■■□□□ 1,46
Arpc1aQ9R0Q6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,1■■□□□ 1,45
Arpc1aQ9R0Q6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,06■■□□□ 1,44
Arpc1aQ9R0Q6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Arpc1aQ9R0Q6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1,43
Arpc1aQ9R0Q6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,93■■□□□ 1,42
Arpc1aQ9R0Q6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23,81■■□□□ 1,4
Arpc1aQ9R0Q6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23,76■■□□□ 1,39
Arpc1aQ9R0Q6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23,74■■□□□ 1,39
Arpc1aQ9R0Q6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23,71■■□□□ 1,39
Arpc1aQ9R0Q6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,7■■□□□ 1,38
Arpc1aQ9R0Q6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Arpc1aQ9R0Q6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23,52■■□□□ 1,36
Arpc1aQ9R0Q6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,52■■□□□ 1,36
Arpc1aQ9R0Q6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,4■■□□□ 1,34
Arpc1aQ9R0Q6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23,39■■□□□ 1,34
Arpc1aQ9R0Q6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,28■■□□□ 1,32
Arpc1aQ9R0Q6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23,15■■□□□ 1,3
Arpc1aQ9R0Q6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23,12■■□□□ 1,29
Arpc1aQ9R0Q6 Gm10524-201ENSMUST00000181931 1893 ntBASIC23,11■■□□□ 1,29
Arpc1aQ9R0Q6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,1■■□□□ 1,29
Arpc1aQ9R0Q6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,09■■□□□ 1,29
Arpc1aQ9R0Q6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Arpc1aQ9R0Q6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1,27
Arpc1aQ9R0Q6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,99■■□□□ 1,27
Arpc1aQ9R0Q6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,97■■□□□ 1,27
Arpc1aQ9R0Q6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22,92■■□□□ 1,26
Arpc1aQ9R0Q6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Arpc1aQ9R0Q6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22,9■■□□□ 1,26
Arpc1aQ9R0Q6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,85■■□□□ 1,25
Arpc1aQ9R0Q6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,25
Arpc1aQ9R0Q6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,25
Arpc1aQ9R0Q6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22,82■■□□□ 1,24
Arpc1aQ9R0Q6 Gm25238-201ENSMUST00000174914 89 ntBASIC22,81■■□□□ 1,24
Arpc1aQ9R0Q6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,75■■□□□ 1,23
Arpc1aQ9R0Q6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22,72■■□□□ 1,23
Arpc1aQ9R0Q6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Arpc1aQ9R0Q6 Gm27325-201ENSMUST00000175467 74 ntBASIC22,69■■□□□ 1,22
Arpc1aQ9R0Q6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,66■■□□□ 1,22
Arpc1aQ9R0Q6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Arpc1aQ9R0Q6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22,65■■□□□ 1,22
Arpc1aQ9R0Q6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22,64■■□□□ 1,21
Arpc1aQ9R0Q6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22,64■■□□□ 1,21
Arpc1aQ9R0Q6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22,64■■□□□ 1,21
Arpc1aQ9R0Q6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22,61■■□□□ 1,21
Arpc1aQ9R0Q6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22,57■■□□□ 1,2
Arpc1aQ9R0Q6 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,52■■□□□ 1,2
Arpc1aQ9R0Q6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,52■■□□□ 1,19
Arpc1aQ9R0Q6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22,47■■□□□ 1,19
Arpc1aQ9R0Q6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22,45■■□□□ 1,18
Arpc1aQ9R0Q6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Arpc1aQ9R0Q6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,18
Arpc1aQ9R0Q6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,29■■□□□ 1,16
Arpc1aQ9R0Q6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22,26■■□□□ 1,15
Arpc1aQ9R0Q6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22,23■■□□□ 1,15
Arpc1aQ9R0Q6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,23■■□□□ 1,15
Arpc1aQ9R0Q6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
Arpc1aQ9R0Q6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22,19■■□□□ 1,14
Arpc1aQ9R0Q6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22,17■■□□□ 1,14
Arpc1aQ9R0Q6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22,17■■□□□ 1,14
Arpc1aQ9R0Q6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22,17■■□□□ 1,14
Arpc1aQ9R0Q6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,17■■□□□ 1,14
Arpc1aQ9R0Q6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,14■■□□□ 1,13
Arpc1aQ9R0Q6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,09■■□□□ 1,13
Arpc1aQ9R0Q6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22,07■■□□□ 1,12
Arpc1aQ9R0Q6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,06■■□□□ 1,12
Arpc1aQ9R0Q6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
Arpc1aQ9R0Q6 Rab21-202ENSMUST00000218831 843 ntBASIC22,05■■□□□ 1,12
Arpc1aQ9R0Q6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,12
Arpc1aQ9R0Q6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,02■■□□□ 1,12
Arpc1aQ9R0Q6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,01■■□□□ 1,11
Arpc1aQ9R0Q6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Arpc1aQ9R0Q6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21,99■■□□□ 1,11
Arpc1aQ9R0Q6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,98■■□□□ 1,11
Arpc1aQ9R0Q6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21,96■■□□□ 1,11
Arpc1aQ9R0Q6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21,93■■□□□ 1,1
Retrieved 100 of 76,532 protein–RNA pairs in 22,8 ms