Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm25239-201ENSMUST00000174915 86 ntBASIC35,03■■■■□ 3,2
NgfP01139 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,42■■■□□ 2,78
NgfP01139 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31,99■■■□□ 2,71
NgfP01139 Gm15042-201ENSMUST00000120212 883 ntBASIC30,56■■■□□ 2,48
NgfP01139 Gm24109-201ENSMUST00000175489 103 ntBASIC30,39■■■□□ 2,46
NgfP01139 Gm15045-201ENSMUST00000117359 883 ntBASIC29,88■■■□□ 2,37
NgfP01139 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
NgfP01139 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,6■■■□□ 2,33
NgfP01139 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
NgfP01139 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,47■■■□□ 2,31
NgfP01139 Gm23366-201ENSMUST00000175022 89 ntBASIC29,28■■■□□ 2,28
NgfP01139 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,11■■■□□ 2,25
NgfP01139 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29,1■■■□□ 2,25
NgfP01139 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,61■■■□□ 2,17
NgfP01139 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
NgfP01139 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,34■■■□□ 2,13
NgfP01139 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,26■■■□□ 2,12
NgfP01139 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,13■■■□□ 2,09
NgfP01139 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,08■■■□□ 2,09
NgfP01139 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,07■■■□□ 2,08
NgfP01139 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28,06■■■□□ 2,08
NgfP01139 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,03■■■□□ 2,08
NgfP01139 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27,95■■■□□ 2,06
NgfP01139 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,91■■■□□ 2,06
NgfP01139 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27,8■■■□□ 2,04
NgfP01139 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27,79■■■□□ 2,04
NgfP01139 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,77■■■□□ 2,04
NgfP01139 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27,7■■■□□ 2,02
NgfP01139 Gm25238-201ENSMUST00000174914 89 ntBASIC27,67■■■□□ 2,02
NgfP01139 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27,66■■■□□ 2,02
NgfP01139 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,63■■■□□ 2,01
NgfP01139 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27,63■■■□□ 2,01
NgfP01139 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,52■■■□□ 2
NgfP01139 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,52■■■□□ 2
NgfP01139 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,33■■□□□ 1,96
NgfP01139 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27,2■■□□□ 1,94
NgfP01139 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,17■■□□□ 1,94
NgfP01139 Psd-208ENSMUST00000224556 2034 ntBASIC27,04■■□□□ 1,92
NgfP01139 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
NgfP01139 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26,98■■□□□ 1,91
NgfP01139 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,96■■□□□ 1,91
NgfP01139 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26,96■■□□□ 1,91
NgfP01139 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26,88■■□□□ 1,89
NgfP01139 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26,88■■□□□ 1,89
NgfP01139 Gm27325-201ENSMUST00000175467 74 ntBASIC26,79■■□□□ 1,88
NgfP01139 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,66■■□□□ 1,86
NgfP01139 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,65■■□□□ 1,86
NgfP01139 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26,61■■□□□ 1,85
NgfP01139 Gm25262-201ENSMUST00000174934 133 ntBASIC26,56■■□□□ 1,84
NgfP01139 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
NgfP01139 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,5■■□□□ 1,83
NgfP01139 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
NgfP01139 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
NgfP01139 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
NgfP01139 Rab21-202ENSMUST00000218831 843 ntBASIC26,35■■□□□ 1,81
NgfP01139 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,31■■□□□ 1,8
NgfP01139 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,28■■□□□ 1,8
NgfP01139 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,21■■□□□ 1,79
NgfP01139 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26,2■■□□□ 1,78
NgfP01139 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,17■■□□□ 1,78
NgfP01139 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,13■■□□□ 1,77
NgfP01139 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26,1■■□□□ 1,77
NgfP01139 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,06■■□□□ 1,76
NgfP01139 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26,04■■□□□ 1,76
NgfP01139 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26,03■■□□□ 1,76
NgfP01139 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,02■■□□□ 1,76
NgfP01139 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
NgfP01139 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26,01■■□□□ 1,75
NgfP01139 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25,98■■□□□ 1,75
NgfP01139 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25,97■■□□□ 1,75
NgfP01139 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25,94■■□□□ 1,74
NgfP01139 Gm26115-201ENSMUST00000175605 87 ntBASIC25,93■■□□□ 1,74
NgfP01139 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25,91■■□□□ 1,74
NgfP01139 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
NgfP01139 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,86■■□□□ 1,73
NgfP01139 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
NgfP01139 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,82■■□□□ 1,72
NgfP01139 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25,81■■□□□ 1,72
NgfP01139 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25,8■■□□□ 1,72
NgfP01139 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
NgfP01139 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
NgfP01139 Gm8109-201ENSMUST00000194076 746 ntBASIC25,74■■□□□ 1,71
NgfP01139 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25,7■■□□□ 1,7
NgfP01139 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25,66■■□□□ 1,7
NgfP01139 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25,66■■□□□ 1,7
NgfP01139 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,65■■□□□ 1,7
NgfP01139 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25,65■■□□□ 1,7
NgfP01139 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25,65■■□□□ 1,7
NgfP01139 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25,65■■□□□ 1,7
NgfP01139 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,69
NgfP01139 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25,62■■□□□ 1,69
NgfP01139 Gm10524-201ENSMUST00000181931 1893 ntBASIC25,58■■□□□ 1,69
NgfP01139 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,57■■□□□ 1,68
NgfP01139 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
NgfP01139 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25,5■■□□□ 1,67
NgfP01139 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
NgfP01139 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25,44■■□□□ 1,66
NgfP01139 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25,43■■□□□ 1,66
NgfP01139 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
NgfP01139 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Retrieved 100 of 76,532 protein–RNA pairs in 43,5 ms