Protein–RNA interactions for Protein: Q8BW22

Ss18l1, Calcium-responsive transactivator, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18l1Q8BW22 Gm25239-201ENSMUST00000174915 86 ntBASIC35.4■■■■□ 3.26
Ss18l1Q8BW22 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Ss18l1Q8BW22 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ss18l1Q8BW22 Gm24109-201ENSMUST00000175489 103 ntBASIC30.81■■■□□ 2.52
Ss18l1Q8BW22 Gm15042-201ENSMUST00000120212 883 ntBASIC30.69■■■□□ 2.5
Ss18l1Q8BW22 Gm15045-201ENSMUST00000117359 883 ntBASIC30.01■■■□□ 2.39
Ss18l1Q8BW22 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ss18l1Q8BW22 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ss18l1Q8BW22 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Ss18l1Q8BW22 Gm23366-201ENSMUST00000175022 89 ntBASIC29.5■■■□□ 2.31
Ss18l1Q8BW22 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ss18l1Q8BW22 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ss18l1Q8BW22 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.81■■■□□ 2.2
Ss18l1Q8BW22 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ss18l1Q8BW22 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Ss18l1Q8BW22 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.57■■■□□ 2.16
Ss18l1Q8BW22 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.48■■■□□ 2.15
Ss18l1Q8BW22 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ss18l1Q8BW22 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Ss18l1Q8BW22 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Ss18l1Q8BW22 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ss18l1Q8BW22 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ss18l1Q8BW22 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ss18l1Q8BW22 Gm25238-201ENSMUST00000174914 89 ntBASIC28.05■■■□□ 2.08
Ss18l1Q8BW22 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ss18l1Q8BW22 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28■■■□□ 2.07
Ss18l1Q8BW22 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ss18l1Q8BW22 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.89■■■□□ 2.06
Ss18l1Q8BW22 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ss18l1Q8BW22 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ss18l1Q8BW22 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ss18l1Q8BW22 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ss18l1Q8BW22 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
Ss18l1Q8BW22 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.4■■□□□ 1.98
Ss18l1Q8BW22 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ss18l1Q8BW22 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ss18l1Q8BW22 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Ss18l1Q8BW22 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.17■■□□□ 1.94
Ss18l1Q8BW22 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.1■■□□□ 1.93
Ss18l1Q8BW22 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ss18l1Q8BW22 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ss18l1Q8BW22 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ss18l1Q8BW22 Gm25262-201ENSMUST00000174934 133 ntBASIC26.93■■□□□ 1.9
Ss18l1Q8BW22 Gm27325-201ENSMUST00000175467 74 ntBASIC26.88■■□□□ 1.89
Ss18l1Q8BW22 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.85■■□□□ 1.89
Ss18l1Q8BW22 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.77■■□□□ 1.88
Ss18l1Q8BW22 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ss18l1Q8BW22 Psd-208ENSMUST00000224556 2034 ntBASIC26.69■■□□□ 1.86
Ss18l1Q8BW22 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ss18l1Q8BW22 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.54■■□□□ 1.84
Ss18l1Q8BW22 Rab21-202ENSMUST00000218831 843 ntBASIC26.52■■□□□ 1.84
Ss18l1Q8BW22 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.47■■□□□ 1.83
Ss18l1Q8BW22 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ss18l1Q8BW22 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Ss18l1Q8BW22 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.43■■□□□ 1.82
Ss18l1Q8BW22 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ss18l1Q8BW22 Gm26115-201ENSMUST00000175605 87 ntBASIC26.35■■□□□ 1.81
Ss18l1Q8BW22 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ss18l1Q8BW22 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.32■■□□□ 1.8
Ss18l1Q8BW22 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Ss18l1Q8BW22 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.24■■□□□ 1.79
Ss18l1Q8BW22 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ss18l1Q8BW22 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.22■■□□□ 1.79
Ss18l1Q8BW22 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Ss18l1Q8BW22 Gm8109-201ENSMUST00000194076 746 ntBASIC26.2■■□□□ 1.78
Ss18l1Q8BW22 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ss18l1Q8BW22 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
Ss18l1Q8BW22 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.15■■□□□ 1.78
Ss18l1Q8BW22 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ss18l1Q8BW22 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ss18l1Q8BW22 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ss18l1Q8BW22 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ss18l1Q8BW22 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.02■■□□□ 1.76
Ss18l1Q8BW22 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ss18l1Q8BW22 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ss18l1Q8BW22 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
Ss18l1Q8BW22 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.93■■□□□ 1.74
Ss18l1Q8BW22 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ss18l1Q8BW22 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ss18l1Q8BW22 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ss18l1Q8BW22 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Ss18l1Q8BW22 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ss18l1Q8BW22 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ss18l1Q8BW22 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ss18l1Q8BW22 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ss18l1Q8BW22 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.69■■□□□ 1.7
Ss18l1Q8BW22 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Ss18l1Q8BW22 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ss18l1Q8BW22 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.63■■□□□ 1.69
Ss18l1Q8BW22 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.54■■□□□ 1.68
Ss18l1Q8BW22 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.52■■□□□ 1.68
Ss18l1Q8BW22 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Ss18l1Q8BW22 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ss18l1Q8BW22 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.5■■□□□ 1.67
Ss18l1Q8BW22 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ss18l1Q8BW22 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ss18l1Q8BW22 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ss18l1Q8BW22 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Ss18l1Q8BW22 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ss18l1Q8BW22 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms