Protein–RNA interactions for Protein: Q8BW22

Ss18l1, Calcium-responsive transactivator, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18l1Q8BW22 Gm25239-201ENSMUST00000174915 86 ntBASIC35,4■■■■□ 3,26
Ss18l1Q8BW22 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,84■■■□□ 2,85
Ss18l1Q8BW22 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32,33■■■□□ 2,77
Ss18l1Q8BW22 Gm24109-201ENSMUST00000175489 103 ntBASIC30,81■■■□□ 2,52
Ss18l1Q8BW22 Gm15042-201ENSMUST00000120212 883 ntBASIC30,69■■■□□ 2,5
Ss18l1Q8BW22 Gm15045-201ENSMUST00000117359 883 ntBASIC30,01■■■□□ 2,39
Ss18l1Q8BW22 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,91■■■□□ 2,38
Ss18l1Q8BW22 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,84■■■□□ 2,37
Ss18l1Q8BW22 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,72■■■□□ 2,35
Ss18l1Q8BW22 Gm23366-201ENSMUST00000175022 89 ntBASIC29,5■■■□□ 2,31
Ss18l1Q8BW22 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Ss18l1Q8BW22 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,15■■■□□ 2,26
Ss18l1Q8BW22 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,81■■■□□ 2,2
Ss18l1Q8BW22 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Ss18l1Q8BW22 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,18
Ss18l1Q8BW22 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,57■■■□□ 2,16
Ss18l1Q8BW22 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28,48■■■□□ 2,15
Ss18l1Q8BW22 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Ss18l1Q8BW22 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,39■■■□□ 2,14
Ss18l1Q8BW22 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,24■■■□□ 2,11
Ss18l1Q8BW22 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28,18■■■□□ 2,1
Ss18l1Q8BW22 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Ss18l1Q8BW22 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28,07■■■□□ 2,08
Ss18l1Q8BW22 Gm25238-201ENSMUST00000174914 89 ntBASIC28,05■■■□□ 2,08
Ss18l1Q8BW22 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,05■■■□□ 2,08
Ss18l1Q8BW22 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28■■■□□ 2,07
Ss18l1Q8BW22 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,9■■■□□ 2,06
Ss18l1Q8BW22 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,89■■■□□ 2,06
Ss18l1Q8BW22 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27,84■■■□□ 2,05
Ss18l1Q8BW22 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,72■■■□□ 2,03
Ss18l1Q8BW22 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27,6■■■□□ 2,01
Ss18l1Q8BW22 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,59■■■□□ 2,01
Ss18l1Q8BW22 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27,44■■□□□ 1,98
Ss18l1Q8BW22 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,4■■□□□ 1,98
Ss18l1Q8BW22 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27,28■■□□□ 1,96
Ss18l1Q8BW22 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,21■■□□□ 1,95
Ss18l1Q8BW22 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27,18■■□□□ 1,94
Ss18l1Q8BW22 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27,17■■□□□ 1,94
Ss18l1Q8BW22 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27,1■■□□□ 1,93
Ss18l1Q8BW22 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,09■■□□□ 1,93
Ss18l1Q8BW22 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27,08■■□□□ 1,93
Ss18l1Q8BW22 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26,97■■□□□ 1,91
Ss18l1Q8BW22 Gm25262-201ENSMUST00000174934 133 ntBASIC26,93■■□□□ 1,9
Ss18l1Q8BW22 Gm27325-201ENSMUST00000175467 74 ntBASIC26,88■■□□□ 1,89
Ss18l1Q8BW22 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,85■■□□□ 1,89
Ss18l1Q8BW22 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,77■■□□□ 1,88
Ss18l1Q8BW22 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,71■■□□□ 1,87
Ss18l1Q8BW22 Psd-208ENSMUST00000224556 2034 ntBASIC26,69■■□□□ 1,86
Ss18l1Q8BW22 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Ss18l1Q8BW22 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26,54■■□□□ 1,84
Ss18l1Q8BW22 Rab21-202ENSMUST00000218831 843 ntBASIC26,52■■□□□ 1,84
Ss18l1Q8BW22 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,47■■□□□ 1,83
Ss18l1Q8BW22 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26,46■■□□□ 1,83
Ss18l1Q8BW22 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26,46■■□□□ 1,83
Ss18l1Q8BW22 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26,43■■□□□ 1,82
Ss18l1Q8BW22 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Ss18l1Q8BW22 Gm26115-201ENSMUST00000175605 87 ntBASIC26,35■■□□□ 1,81
Ss18l1Q8BW22 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,33■■□□□ 1,81
Ss18l1Q8BW22 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,32■■□□□ 1,8
Ss18l1Q8BW22 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,24■■□□□ 1,79
Ss18l1Q8BW22 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,24■■□□□ 1,79
Ss18l1Q8BW22 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26,23■■□□□ 1,79
Ss18l1Q8BW22 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,22■■□□□ 1,79
Ss18l1Q8BW22 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26,2■■□□□ 1,78
Ss18l1Q8BW22 Gm8109-201ENSMUST00000194076 746 ntBASIC26,2■■□□□ 1,78
Ss18l1Q8BW22 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
Ss18l1Q8BW22 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26,15■■□□□ 1,78
Ss18l1Q8BW22 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,15■■□□□ 1,78
Ss18l1Q8BW22 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Ss18l1Q8BW22 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Ss18l1Q8BW22 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26,06■■□□□ 1,76
Ss18l1Q8BW22 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,03■■□□□ 1,76
Ss18l1Q8BW22 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26,02■■□□□ 1,76
Ss18l1Q8BW22 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Ss18l1Q8BW22 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,96■■□□□ 1,75
Ss18l1Q8BW22 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25,96■■□□□ 1,75
Ss18l1Q8BW22 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25,93■■□□□ 1,74
Ss18l1Q8BW22 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Ss18l1Q8BW22 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25,86■■□□□ 1,73
Ss18l1Q8BW22 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25,79■■□□□ 1,72
Ss18l1Q8BW22 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,76■■□□□ 1,71
Ss18l1Q8BW22 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Ss18l1Q8BW22 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Ss18l1Q8BW22 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25,71■■□□□ 1,71
Ss18l1Q8BW22 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Ss18l1Q8BW22 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25,69■■□□□ 1,7
Ss18l1Q8BW22 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,69■■□□□ 1,7
Ss18l1Q8BW22 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25,66■■□□□ 1,7
Ss18l1Q8BW22 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,63■■□□□ 1,69
Ss18l1Q8BW22 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25,54■■□□□ 1,68
Ss18l1Q8BW22 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25,52■■□□□ 1,68
Ss18l1Q8BW22 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25,52■■□□□ 1,68
Ss18l1Q8BW22 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25,51■■□□□ 1,67
Ss18l1Q8BW22 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25,5■■□□□ 1,67
Ss18l1Q8BW22 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Ss18l1Q8BW22 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Ss18l1Q8BW22 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Ss18l1Q8BW22 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,4■■□□□ 1,66
Ss18l1Q8BW22 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Ss18l1Q8BW22 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25,4■■□□□ 1,66
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms