Protein–RNA interactions for Protein: A0A0A6YXA3

Ighv8-6, Immunoglobulin heavy variable V8-6 (Fragment), mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-6A0A0A6YXA3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ighv8-6A0A0A6YXA3 Gm25239-201ENSMUST00000174915 86 ntBASIC24.99■■□□□ 1.59
Ighv8-6A0A0A6YXA3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ighv8-6A0A0A6YXA3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Ighv8-6A0A0A6YXA3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ighv8-6A0A0A6YXA3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ighv8-6A0A0A6YXA3 Psd-208ENSMUST00000224556 2034 ntBASIC23.9■■□□□ 1.42
Ighv8-6A0A0A6YXA3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ighv8-6A0A0A6YXA3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ighv8-6A0A0A6YXA3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ighv8-6A0A0A6YXA3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ighv8-6A0A0A6YXA3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ighv8-6A0A0A6YXA3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ighv8-6A0A0A6YXA3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ighv8-6A0A0A6YXA3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ighv8-6A0A0A6YXA3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ighv8-6A0A0A6YXA3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ighv8-6A0A0A6YXA3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Ighv8-6A0A0A6YXA3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ighv8-6A0A0A6YXA3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ighv8-6A0A0A6YXA3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ighv8-6A0A0A6YXA3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ighv8-6A0A0A6YXA3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.41■■□□□ 1.18
Ighv8-6A0A0A6YXA3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv8-6A0A0A6YXA3 Gm15042-201ENSMUST00000120212 883 ntBASIC22.25■■□□□ 1.15
Ighv8-6A0A0A6YXA3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ighv8-6A0A0A6YXA3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ighv8-6A0A0A6YXA3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ighv8-6A0A0A6YXA3 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.04■■□□□ 1.12
Ighv8-6A0A0A6YXA3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ighv8-6A0A0A6YXA3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv8-6A0A0A6YXA3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ighv8-6A0A0A6YXA3 Gm15045-201ENSMUST00000117359 883 ntBASIC21.88■■□□□ 1.09
Ighv8-6A0A0A6YXA3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ighv8-6A0A0A6YXA3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv8-6A0A0A6YXA3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.75■■□□□ 1.07
Ighv8-6A0A0A6YXA3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv8-6A0A0A6YXA3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.67■■□□□ 1.06
Ighv8-6A0A0A6YXA3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv8-6A0A0A6YXA3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.64■■□□□ 1.05
Ighv8-6A0A0A6YXA3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ighv8-6A0A0A6YXA3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv8-6A0A0A6YXA3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.62■■□□□ 1.05
Ighv8-6A0A0A6YXA3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ighv8-6A0A0A6YXA3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv8-6A0A0A6YXA3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ighv8-6A0A0A6YXA3 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.49■■□□□ 1.03
Ighv8-6A0A0A6YXA3 Gm24109-201ENSMUST00000175489 103 ntBASIC21.49■■□□□ 1.03
Ighv8-6A0A0A6YXA3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv8-6A0A0A6YXA3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv8-6A0A0A6YXA3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv8-6A0A0A6YXA3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ighv8-6A0A0A6YXA3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ighv8-6A0A0A6YXA3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv8-6A0A0A6YXA3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.23■□□□□ 0.99
Ighv8-6A0A0A6YXA3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv8-6A0A0A6YXA3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ighv8-6A0A0A6YXA3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ighv8-6A0A0A6YXA3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv8-6A0A0A6YXA3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv8-6A0A0A6YXA3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv8-6A0A0A6YXA3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv8-6A0A0A6YXA3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv8-6A0A0A6YXA3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv8-6A0A0A6YXA3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv8-6A0A0A6YXA3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv8-6A0A0A6YXA3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv8-6A0A0A6YXA3 Gm23366-201ENSMUST00000175022 89 ntBASIC20.96■□□□□ 0.95
Ighv8-6A0A0A6YXA3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv8-6A0A0A6YXA3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Ighv8-6A0A0A6YXA3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ighv8-6A0A0A6YXA3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.88■□□□□ 0.93
Ighv8-6A0A0A6YXA3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv8-6A0A0A6YXA3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.87■□□□□ 0.93
Ighv8-6A0A0A6YXA3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv8-6A0A0A6YXA3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ighv8-6A0A0A6YXA3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ighv8-6A0A0A6YXA3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.81■□□□□ 0.92
Ighv8-6A0A0A6YXA3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv8-6A0A0A6YXA3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv8-6A0A0A6YXA3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv8-6A0A0A6YXA3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.74■□□□□ 0.91
Ighv8-6A0A0A6YXA3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv8-6A0A0A6YXA3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ighv8-6A0A0A6YXA3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv8-6A0A0A6YXA3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ighv8-6A0A0A6YXA3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ighv8-6A0A0A6YXA3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv8-6A0A0A6YXA3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv8-6A0A0A6YXA3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ighv8-6A0A0A6YXA3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv8-6A0A0A6YXA3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv8-6A0A0A6YXA3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv8-6A0A0A6YXA3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv8-6A0A0A6YXA3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv8-6A0A0A6YXA3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv8-6A0A0A6YXA3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv8-6A0A0A6YXA3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.48■□□□□ 0.87
Ighv8-6A0A0A6YXA3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv8-6A0A0A6YXA3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms