Protein–RNA interactions for Protein: A0A0A6YXA3

Ighv8-6, Immunoglobulin heavy variable V8-6 (Fragment), mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-6A0A0A6YXA3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25,47■■□□□ 1,67
Ighv8-6A0A0A6YXA3 Gm25239-201ENSMUST00000174915 86 ntBASIC24,99■■□□□ 1,59
Ighv8-6A0A0A6YXA3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,83■■□□□ 1,57
Ighv8-6A0A0A6YXA3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,53■■□□□ 1,52
Ighv8-6A0A0A6YXA3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
Ighv8-6A0A0A6YXA3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,27■■□□□ 1,48
Ighv8-6A0A0A6YXA3 Psd-208ENSMUST00000224556 2034 ntBASIC23,9■■□□□ 1,42
Ighv8-6A0A0A6YXA3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,26■■□□□ 1,31
Ighv8-6A0A0A6YXA3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,1■■□□□ 1,29
Ighv8-6A0A0A6YXA3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22,97■■□□□ 1,27
Ighv8-6A0A0A6YXA3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ighv8-6A0A0A6YXA3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22,8■■□□□ 1,24
Ighv8-6A0A0A6YXA3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,79■■□□□ 1,24
Ighv8-6A0A0A6YXA3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Ighv8-6A0A0A6YXA3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22,75■■□□□ 1,23
Ighv8-6A0A0A6YXA3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22,75■■□□□ 1,23
Ighv8-6A0A0A6YXA3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Ighv8-6A0A0A6YXA3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,64■■□□□ 1,22
Ighv8-6A0A0A6YXA3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,58■■□□□ 1,21
Ighv8-6A0A0A6YXA3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,52■■□□□ 1,2
Ighv8-6A0A0A6YXA3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,47■■□□□ 1,19
Ighv8-6A0A0A6YXA3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22,44■■□□□ 1,18
Ighv8-6A0A0A6YXA3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22,41■■□□□ 1,18
Ighv8-6A0A0A6YXA3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22,31■■□□□ 1,16
Ighv8-6A0A0A6YXA3 Gm15042-201ENSMUST00000120212 883 ntBASIC22,25■■□□□ 1,15
Ighv8-6A0A0A6YXA3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,2■■□□□ 1,14
Ighv8-6A0A0A6YXA3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,11■■□□□ 1,13
Ighv8-6A0A0A6YXA3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,1■■□□□ 1,13
Ighv8-6A0A0A6YXA3 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,04■■□□□ 1,12
Ighv8-6A0A0A6YXA3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21,95■■□□□ 1,1
Ighv8-6A0A0A6YXA3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21,91■■□□□ 1,1
Ighv8-6A0A0A6YXA3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Ighv8-6A0A0A6YXA3 Gm15045-201ENSMUST00000117359 883 ntBASIC21,88■■□□□ 1,09
Ighv8-6A0A0A6YXA3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21,77■■□□□ 1,08
Ighv8-6A0A0A6YXA3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
Ighv8-6A0A0A6YXA3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21,75■■□□□ 1,07
Ighv8-6A0A0A6YXA3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,68■■□□□ 1,06
Ighv8-6A0A0A6YXA3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,67■■□□□ 1,06
Ighv8-6A0A0A6YXA3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21,67■■□□□ 1,06
Ighv8-6A0A0A6YXA3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21,64■■□□□ 1,05
Ighv8-6A0A0A6YXA3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21,64■■□□□ 1,05
Ighv8-6A0A0A6YXA3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21,62■■□□□ 1,05
Ighv8-6A0A0A6YXA3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,62■■□□□ 1,05
Ighv8-6A0A0A6YXA3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21,58■■□□□ 1,04
Ighv8-6A0A0A6YXA3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21,53■■□□□ 1,04
Ighv8-6A0A0A6YXA3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21,51■■□□□ 1,03
Ighv8-6A0A0A6YXA3 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,49■■□□□ 1,03
Ighv8-6A0A0A6YXA3 Gm24109-201ENSMUST00000175489 103 ntBASIC21,49■■□□□ 1,03
Ighv8-6A0A0A6YXA3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Ighv8-6A0A0A6YXA3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Ighv8-6A0A0A6YXA3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Ighv8-6A0A0A6YXA3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,28■■□□□ 1
Ighv8-6A0A0A6YXA3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Ighv8-6A0A0A6YXA3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,24■□□□□ 0,99
Ighv8-6A0A0A6YXA3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21,23■□□□□ 0,99
Ighv8-6A0A0A6YXA3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21,21■□□□□ 0,99
Ighv8-6A0A0A6YXA3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21,19■□□□□ 0,98
Ighv8-6A0A0A6YXA3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,13■□□□□ 0,97
Ighv8-6A0A0A6YXA3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,97
Ighv8-6A0A0A6YXA3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21,08■□□□□ 0,97
Ighv8-6A0A0A6YXA3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21,05■□□□□ 0,96
Ighv8-6A0A0A6YXA3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,03■□□□□ 0,96
Ighv8-6A0A0A6YXA3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,01■□□□□ 0,95
Ighv8-6A0A0A6YXA3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0,95
Ighv8-6A0A0A6YXA3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0,95
Ighv8-6A0A0A6YXA3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0,95
Ighv8-6A0A0A6YXA3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20,99■□□□□ 0,95
Ighv8-6A0A0A6YXA3 Gm23366-201ENSMUST00000175022 89 ntBASIC20,96■□□□□ 0,95
Ighv8-6A0A0A6YXA3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,94■□□□□ 0,94
Ighv8-6A0A0A6YXA3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20,93■□□□□ 0,94
Ighv8-6A0A0A6YXA3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20,9■□□□□ 0,94
Ighv8-6A0A0A6YXA3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20,88■□□□□ 0,93
Ighv8-6A0A0A6YXA3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,87■□□□□ 0,93
Ighv8-6A0A0A6YXA3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20,87■□□□□ 0,93
Ighv8-6A0A0A6YXA3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20,84■□□□□ 0,93
Ighv8-6A0A0A6YXA3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20,83■□□□□ 0,93
Ighv8-6A0A0A6YXA3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,92
Ighv8-6A0A0A6YXA3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,81■□□□□ 0,92
Ighv8-6A0A0A6YXA3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20,81■□□□□ 0,92
Ighv8-6A0A0A6YXA3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20,78■□□□□ 0,92
Ighv8-6A0A0A6YXA3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20,76■□□□□ 0,91
Ighv8-6A0A0A6YXA3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20,74■□□□□ 0,91
Ighv8-6A0A0A6YXA3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20,73■□□□□ 0,91
Ighv8-6A0A0A6YXA3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20,72■□□□□ 0,91
Ighv8-6A0A0A6YXA3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20,7■□□□□ 0,9
Ighv8-6A0A0A6YXA3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20,68■□□□□ 0,9
Ighv8-6A0A0A6YXA3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20,68■□□□□ 0,9
Ighv8-6A0A0A6YXA3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20,66■□□□□ 0,9
Ighv8-6A0A0A6YXA3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20,66■□□□□ 0,9
Ighv8-6A0A0A6YXA3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20,64■□□□□ 0,9
Ighv8-6A0A0A6YXA3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20,63■□□□□ 0,89
Ighv8-6A0A0A6YXA3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20,61■□□□□ 0,89
Ighv8-6A0A0A6YXA3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20,57■□□□□ 0,88
Ighv8-6A0A0A6YXA3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20,56■□□□□ 0,88
Ighv8-6A0A0A6YXA3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20,54■□□□□ 0,88
Ighv8-6A0A0A6YXA3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20,52■□□□□ 0,88
Ighv8-6A0A0A6YXA3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20,48■□□□□ 0,87
Ighv8-6A0A0A6YXA3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20,48■□□□□ 0,87
Ighv8-6A0A0A6YXA3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,48■□□□□ 0,87
Ighv8-6A0A0A6YXA3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20,47■□□□□ 0,87
Retrieved 100 of 76,532 protein–RNA pairs in 41,2 ms