RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C TAN1P53072 289 aaPredicted RBP9□□□□□ -0.97
NDE1YMR145C SPP41P38904 1435 aa9□□□□□ -0.97
NDE1YMR145C SWE1P32944 819 aa8.99□□□□□ -0.97
NDE1YMR145C PRP3Q03338 469 aaPredicted RBP8.99□□□□□ -0.97
NDE1YMR145C CFT1Q06632 1357 aaKnown RBP8.99□□□□□ -0.97
NDE1YMR145C CHD1P32657 1468 aa8.98□□□□□ -0.97
NDE1YMR145C MMS22Q06164 1454 aa8.97□□□□□ -0.97
NDE1YMR145C SSA1P10591 642 aaKnown RBP8.96□□□□□ -0.98
NDE1YMR145C SSA2P10592 639 aaKnown RBP8.96□□□□□ -0.98
NDE1YMR145C CBF5P33322 483 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
NDE1YMR145C ECM16Q04217 1267 aaKnown RBP8.96□□□□□ -0.98
NDE1YMR145C RPN7Q06103 429 aaKnown RBP8.96□□□□□ -0.98
NDE1YMR145C ROX1P25042 368 aa8.95□□□□□ -0.98
NDE1YMR145C SPT16P32558 1035 aaKnown RBP8.95□□□□□ -0.98
NDE1YMR145C NOP8Q08287 484 aaPredicted RBP8.95□□□□□ -0.98
NDE1YMR145C GIN4Q12263 1142 aa8.94□□□□□ -0.98
NDE1YMR145C TOP2P06786 1428 aaKnown RBP8.93□□□□□ -0.98
NDE1YMR145C SUB1P54000 292 aaKnown RBP8.93□□□□□ -0.98
NDE1YMR145C PET111P08468 800 aa8.92□□□□□ -0.98
NDE1YMR145C DSN1P40568 576 aa8.91□□□□□ -0.98
NDE1YMR145C SAP190P36123 1033 aa8.91□□□□□ -0.98
NDE1YMR145C ORC1P54784 914 aaPredicted RBP8.9□□□□□ -0.98
NDE1YMR145C SLN1P39928 1220 aaPredicted RBP8.89□□□□□ -0.99
NDE1YMR145C APL5Q08951 932 aaKnown RBP8.89□□□□□ -0.99
NDE1YMR145C XRN1P22147 1528 aaKnown RBP8.89□□□□□ -0.99
NDE1YMR145C RRP14P36080 434 aaKnown RBP8.88□□□□□ -0.99
NDE1YMR145C SRP54P20424 541 aaKnown RBP8.88□□□□□ -0.99
NDE1YMR145C PEA2P40091 420 aa8.87□□□□□ -0.99
NDE1YMR145C MMS1Q06211 1407 aa8.87□□□□□ -0.99
NDE1YMR145C YPP1P46951 817 aa8.86□□□□□ -0.99
NDE1YMR145C BMS1Q08965 1183 aaKnown RBP8.86□□□□□ -0.99
NDE1YMR145C CLB5P30283 435 aa8.85□□□□□ -0.99
NDE1YMR145C DMA1P38823 416 aa8.85□□□□□ -0.99
NDE1YMR145C MPP10P47083 593 aaKnown RBP8.85□□□□□ -0.99
NDE1YMR145C RRP15Q06511 250 aaPredicted RBP8.85□□□□□ -0.99
NDE1YMR145C MED8P38304 223 aa8.84□□□□□ -0.99
NDE1YMR145C CHZ1P40019 153 aaPredicted RBP8.84□□□□□ -0.99
NDE1YMR145C MON2P48563 1636 aaPredicted RBP8.83□□□□□ -1
NDE1YMR145C CDC11P32458 415 aa8.83□□□□□ -1
NDE1YMR145C RSC8P43609 557 aaKnown RBP8.83□□□□□ -1
NDE1YMR145C SRB8P25648 1427 aa8.83□□□□□ -1
NDE1YMR145C PEP1P32319 1579 aa8.82□□□□□ -1
NDE1YMR145C NOT3P06102 836 aaKnown RBP8.82□□□□□ -1
NDE1YMR145C YIR014WP40570 242 aa8.82□□□□□ -1
NDE1YMR145C YLL054CQ12244 843 aa8.82□□□□□ -1
NDE1YMR145C RAD51P25454 400 aa8.81□□□□□ -1
NDE1YMR145C MCM1P11746 286 aa8.81□□□□□ -1
NDE1YMR145C TY1B-AO13527 1196 aaKnown RBP8.8□□□□□ -1
NDE1YMR145C ECM1P39715 212 aa8.8□□□□□ -1
NDE1YMR145C BUD4P47136 1447 aa8.8□□□□□ -1
NDE1YMR145C YVC1Q12324 675 aa8.8□□□□□ -1
NDE1YMR145C DEP1P31385 405 aa8.79□□□□□ -1
NDE1YMR145C ALD3P54114 506 aa8.79□□□□□ -1
NDE1YMR145C ERV41Q04651 352 aa8.79□□□□□ -1
NDE1YMR145C SWI3P32591 825 aa8.78□□□□□ -1
NDE1YMR145C EDE1P34216 1381 aa8.78□□□□□ -1
NDE1YMR145C MYO4P32492 1471 aa8.78□□□□□ -1
NDE1YMR145C SUP35P05453 685 aaKnown RBP8.78□□□□□ -1
NDE1YMR145C HSC82P15108 705 aaKnown RBP8.78□□□□□ -1
NDE1YMR145C VID30P53076 958 aa8.78□□□□□ -1
NDE1YMR145C RPC82P32349 654 aa8.77□□□□□ -1.01
NDE1YMR145C LEM3P42838 414 aa8.77□□□□□ -1.01
NDE1YMR145C PAP2P53632 584 aaKnown RBP8.77□□□□□ -1.01
NDE1YMR145C IKI3Q06706 1349 aaKnown RBP8.77□□□□□ -1.01
NDE1YMR145C YMR124WP39523 943 aaKnown RBP8.76□□□□□ -1.01
NDE1YMR145C SEC9P40357 651 aa8.76□□□□□ -1.01
NDE1YMR145C BRN1P38170 754 aa8.75□□□□□ -1.01
NDE1YMR145C BRL1P38770 471 aa8.75□□□□□ -1.01
NDE1YMR145C VPS72Q03388 795 aa8.75□□□□□ -1.01
NDE1YMR145C TRM732Q03496 1420 aa8.74□□□□□ -1.01
NDE1YMR145C NAB3P38996 802 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
NDE1YMR145C YLR419WQ06698 1435 aaKnown RBP8.74□□□□□ -1.01
NDE1YMR145C HOS4P40480 1083 aa8.73□□□□□ -1.01
NDE1YMR145C DJP1P40564 432 aa8.73□□□□□ -1.01
NDE1YMR145C NOP56Q12460 504 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
NDE1YMR145C AIM20P40451 204 aa8.72□□□□□ -1.01
NDE1YMR145C PRY3P47033 881 aa8.72□□□□□ -1.01
NDE1YMR145C ABP1P15891 592 aaKnown RBP8.71□□□□□ -1.02
NDE1YMR145C CLB1P24868 471 aa8.71□□□□□ -1.02
NDE1YMR145C VPS30Q02948 557 aa8.71□□□□□ -1.02
NDE1YMR145C YMR196WQ04336 1088 aa8.71□□□□□ -1.02
NDE1YMR145C NFI1Q12216 726 aa8.71□□□□□ -1.02
NDE1YMR145C YPK9Q12697 1472 aa8.71□□□□□ -1.02
NDE1YMR145C LEU3P08638 886 aa8.7□□□□□ -1.02
NDE1YMR145C CFT2Q12102 859 aaPredicted RBP8.7□□□□□ -1.02
NDE1YMR145C CIN4P39110 191 aa8.69□□□□□ -1.02
NDE1YMR145C RSC1P53236 928 aa8.69□□□□□ -1.02
NDE1YMR145C YOR389WQ08912 624 aa8.69□□□□□ -1.02
NDE1YMR145C TY4B-PA0A0B7P3V8 1104 aa8.69□□□□□ -1.02
NDE1YMR145C RNT1Q02555 471 aa8.69□□□□□ -1.02
NDE1YMR145C VPS60Q03390 229 aa8.69□□□□□ -1.02
NDE1YMR145C GGA1Q06336 557 aa8.69□□□□□ -1.02
NDE1YMR145C ISW1P38144 1129 aa8.68□□□□□ -1.02
NDE1YMR145C TPM2P40414 161 aa8.68□□□□□ -1.02
NDE1YMR145C BDP1P46678 594 aa8.68□□□□□ -1.02
NDE1YMR145C NOP14Q99207 810 aaKnown RBP8.68□□□□□ -1.02
NDE1YMR145C KAR3P17119 729 aa8.67□□□□□ -1.02
NDE1YMR145C MSP1P28737 362 aa8.67□□□□□ -1.02
NDE1YMR145C KNS1P32350 737 aaPredicted RBP8.67□□□□□ -1.02
NDE1YMR145C UBP10P53874 792 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms