RNA–Protein interactions for RNA: YDR457W

TOM1, Transcript of E3 ubiquitin ligase of the hect-domain class, yeast

Gene TOM1, Length 9,807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOM1	YDR457W	CDC37	P06101	506 aa	Known RBP	3.25	□□□□□ -1.89
TOM1	YDR457W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.25	□□□□□ -1.89	not detected
TOM1	YDR457W	VPS24	P36095	224 aa	Known RBP	3.25	□□□□□ -1.89
TOM1	YDR457W	SGM1	P47166	707 aa		3.25	□□□□□ -1.89
TOM1	YDR457W	MDM38	Q08179	573 aa		3.25	□□□□□ -1.89
TOM1	YDR457W	NBL1	Q3E7Y6	73 aa		3.25	□□□□□ -1.89
TOM1	YDR457W	ESF1	Q06344	628 aa	Known RBP	3.25	□□□□□ -1.89
TOM1	YDR457W	NOG1	Q02892	647 aa	Known RBP	3.24	□□□□□ -1.89
TOM1	YDR457W	VPS60	Q03390	229 aa		3.24	□□□□□ -1.89
TOM1	YDR457W	SYH1	Q02875	849 aa	Known RBP	3.24	□□□□□ -1.89
TOM1	YDR457W	ITC1	P53125	1264 aa		3.24	□□□□□ -1.89
TOM1	YDR457W	CTR9	P89105	1077 aa		3.24	□□□□□ -1.89
TOM1	YDR457W	CLB5	P30283	435 aa		3.24	□□□□□ -1.89
TOM1	YDR457W	SAS3	P34218	831 aa		3.24	□□□□□ -1.89
TOM1	YDR457W	RPN1	P38764	993 aa	Known RBP	3.24	□□□□□ -1.89
TOM1	YDR457W	RRP8	P38961	392 aa	Known RBP	3.24	□□□□□ -1.89
TOM1	YDR457W	DSN1	P40568	576 aa		3.24	□□□□□ -1.89
TOM1	YDR457W	MGA2	P40578	1113 aa		3.24	□□□□□ -1.89
TOM1	YDR457W	HUL5	P53119	910 aa		3.24	□□□□□ -1.89
TOM1	YDR457W	KEX1	P09620	729 aa		3.23	□□□□□ -1.89
TOM1	YDR457W	HIS4	P00815	799 aa	Known RBP	3.23	□□□□□ -1.89
TOM1	YDR457W	RPS0B	P46654	252 aa	Known RBP	3.23	□□□□□ -1.89
TOM1	YDR457W	RRP14	P36080	434 aa	Known RBP	3.23	□□□□□ -1.89
TOM1	YDR457W	ESF2	P53743	316 aa	Known RBP	3.23	□□□□□ -1.89
TOM1	YDR457W	RNT1	Q02555	471 aa		3.23	□□□□□ -1.89
TOM1	YDR457W	SFB2	P53953	876 aa		3.22	□□□□□ -1.89
TOM1	YDR457W	TY4A-H	Q6Q5P6	413 aa		3.22	□□□□□ -1.89
TOM1	YDR457W	CLB1	P24868	471 aa		3.22	□□□□□ -1.89
TOM1	YDR457W	SPA2	P23201	1466 aa	Known RBP	3.22	□□□□□ -1.89
TOM1	YDR457W	TCD1	P38756	429 aa		3.22	□□□□□ -1.89
TOM1	YDR457W	KAR2	P16474	682 aa	Known RBP	3.22	□□□□□ -1.89
TOM1	YDR457W	OLA1	P38219	394 aa	Known RBP	3.22	□□□□□ -1.89
TOM1	YDR457W	CAJ1	P39101	391 aa		3.22	□□□□□ -1.89
TOM1	YDR457W	MSH4	P40965	878 aa	Predicted RBP	3.22	□□□□□ -1.89
TOM1	YDR457W	TY4A-J	P47023	414 aa		3.22	□□□□□ -1.89
TOM1	YDR457W	RCF1	Q03713	159 aa		3.22	□□□□□ -1.89
TOM1	YDR457W	KRE33	P53914	1056 aa	Known RBP	3.21	□□□□□ -1.89
TOM1	YDR457W	CDC45	Q08032	650 aa		3.21	□□□□□ -1.9
TOM1	YDR457W	IMH1	Q06704	911 aa	Known RBP	3.21	□□□□□ -1.9
TOM1	YDR457W	SFI1	Q12369	946 aa		3.21	□□□□□ -1.9
TOM1	YDR457W	SEC27	P41811	889 aa	Known RBP	3.21	□□□□□ -1.9
TOM1	YDR457W	SIP3	P38717	1229 aa		3.21	□□□□□ -1.9
TOM1	YDR457W	ISW2	Q08773	1120 aa		3.21	□□□□□ -1.9
TOM1	YDR457W	BUG1	Q12191	341 aa		3.21	□□□□□ -1.9
TOM1	YDR457W	HOS4	P40480	1083 aa		3.21	□□□□□ -1.9
TOM1	YDR457W	YJL181W	P46987	611 aa		3.21	□□□□□ -1.9
TOM1	YDR457W	MDG1	P53885	366 aa		3.21	□□□□□ -1.9
TOM1	YDR457W	SEN54	Q02825	467 aa	Predicted RBP	3.21	□□□□□ -1.9
TOM1	YDR457W	SWI6	P09959	803 aa		3.21	□□□□□ -1.9
TOM1	YDR457W	PKH1	Q03407	766 aa		3.2	□□□□□ -1.9
TOM1	YDR457W	DEP1	P31385	405 aa		3.2	□□□□□ -1.9
TOM1	YDR457W	TAF5	P38129	798 aa		3.2	□□□□□ -1.9
TOM1	YDR457W	PLP2	Q12017	286 aa		3.2	□□□□□ -1.9
TOM1	YDR457W	PDS5	Q04264	1277 aa		3.2	□□□□□ -1.9
TOM1	YDR457W	SAC6	P32599	642 aa	Known RBP	3.2	□□□□□ -1.9
TOM1	YDR457W	OSW7	P43611	510 aa		3.2	□□□□□ -1.9
TOM1	YDR457W	FYV8	P46949	817 aa	Known RBP	3.2	□□□□□ -1.9
TOM1	YDR457W	HEM3	P28789	327 aa		3.19	□□□□□ -1.9
TOM1	YDR457W	RTR1	P40084	226 aa	Predicted RBP	3.19	□□□□□ -1.9
TOM1	YDR457W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
TOM1	YDR457W	RPG1	P38249	964 aa	Known RBP	3.19	□□□□□ -1.9
TOM1	YDR457W	ETP1	P38748	585 aa	Known RBP	3.19	□□□□□ -1.9
TOM1	YDR457W	VPS30	Q02948	557 aa		3.19	□□□□□ -1.9
TOM1	YDR457W	VHS3	Q08438	674 aa		3.19	□□□□□ -1.9
TOM1	YDR457W	RSM25	P40496	264 aa		3.19	□□□□□ -1.9
TOM1	YDR457W	YGR130C	P53278	816 aa		3.19	□□□□□ -1.9
TOM1	YDR457W	SMI1	P32566	505 aa		3.19	□□□□□ -1.9
TOM1	YDR457W	SMY2	P32909	740 aa	Known RBP	3.19	□□□□□ -1.9
TOM1	YDR457W	CLB3	P24870	427 aa		3.18	□□□□□ -1.9
TOM1	YDR457W	SSE1	P32589	693 aa	Known RBP	3.18	□□□□□ -1.9
TOM1	YDR457W	HOP2	P53187	214 aa		3.18	□□□□□ -1.9
TOM1	YDR457W	GIR2	Q03768	265 aa	Predicted RBP	3.18	□□□□□ -1.9
TOM1	YDR457W	SPT8	P38915	602 aa		3.18	□□□□□ -1.9
TOM1	YDR457W	BBC1	P47068	1157 aa		3.18	□□□□□ -1.9
TOM1	YDR457W	BIK1	P11709	440 aa		3.18	□□□□□ -1.9
TOM1	YDR457W	TOP1	P04786	769 aa		3.18	□□□□□ -1.9
TOM1	YDR457W	NNF2	P53253	936 aa		3.18	□□□□□ -1.9
TOM1	YDR457W	RRI2	Q12348	645 aa		3.18	□□□□□ -1.9
TOM1	YDR457W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
TOM1	YDR457W	KEL1	P38853	1164 aa	Known RBP	3.18	□□□□□ -1.9
TOM1	YDR457W	UTP9	P38882	575 aa	Known RBP	3.18	□□□□□ -1.9
TOM1	YDR457W	VPS9	P54787	451 aa		3.18	□□□□□ -1.9
TOM1	YDR457W	HCR1	Q05775	265 aa	Known RBP	3.18	□□□□□ -1.9
TOM1	YDR457W	RAT1	Q02792	1006 aa	Known RBP	3.18	□□□□□ -1.9
TOM1	YDR457W	MPP10	P47083	593 aa	Known RBP	3.17	□□□□□ -1.9
TOM1	YDR457W	DIP2	Q12220	943 aa	Predicted RBP	3.17	□□□□□ -1.9
TOM1	YDR457W	VPS72	Q03388	795 aa		3.17	□□□□□ -1.9
TOM1	YDR457W	BRR1	Q99177	341 aa	Predicted RBP	3.17	□□□□□ -1.9
TOM1	YDR457W	RPC37	P36121	282 aa		3.17	□□□□□ -1.9
TOM1	YDR457W	ESL2	P36168	1195 aa		3.17	□□□□□ -1.9
TOM1	YDR457W	OPY2	Q06810	360 aa		3.17	□□□□□ -1.9
TOM1	YDR457W	ARL1	P38116	183 aa	Known RBP	3.17	□□□□□ -1.9
TOM1	YDR457W	SWD1	P39706	426 aa		3.17	□□□□□ -1.9
TOM1	YDR457W	DSL1	P53847	754 aa		3.17	□□□□□ -1.9
TOM1	YDR457W	HSP104	P31539	908 aa	Known RBP	3.17	□□□□□ -1.9
TOM1	YDR457W	YEL1	P34225	687 aa		3.17	□□□□□ -1.9
TOM1	YDR457W	SAP190	P36123	1033 aa		3.17	□□□□□ -1.9
TOM1	YDR457W	NMD3	P38861	518 aa	Known RBP	3.17	□□□□□ -1.9
TOM1	YDR457W	SLK19	Q08581	821 aa	Known RBP	3.17	□□□□□ -1.9
TOM1	YDR457W	PWP2	P25635	923 aa	Known RBP	3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms