RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W THI6P41835 540 aa3.93□□□□□ -1.78
CHD1YER164W RPL17BP46990 184 aaKnown RBP3.93□□□□□ -1.78
CHD1YER164W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
CHD1YER164W SHE9Q04172 456 aa3.93□□□□□ -1.78
CHD1YER164W FRA1Q07825 749 aa3.93□□□□□ -1.78
CHD1YER164W PEX2P32800 271 aa3.92□□□□□ -1.78
CHD1YER164W MRP8P35719 219 aa3.92□□□□□ -1.78
CHD1YER164W ALD5P40047 520 aaKnown RBP3.92□□□□□ -1.78
CHD1YER164W IAH1P41734 238 aa3.92□□□□□ -1.78
CHD1YER164W ZIP2P53061 704 aa3.92□□□□□ -1.78
CHD1YER164W CRF1Q04930 467 aa3.92□□□□□ -1.78
CHD1YER164W DUS4Q06063 367 aa3.92□□□□□ -1.78
CHD1YER164W NOP6Q07623 225 aaKnown RBP3.92□□□□□ -1.78
CHD1YER164W YOR223WQ12015 292 aa3.92□□□□□ -1.78
CHD1YER164W SLX4Q12098 748 aa3.92□□□□□ -1.78
CHD1YER164W YDJ1P25491 409 aaKnown RBP3.92□□□□□ -1.78
CHD1YER164W GPI10P30777 616 aa3.92□□□□□ -1.78
CHD1YER164W PTC4P38089 393 aa3.92□□□□□ -1.78
CHD1YER164W YHR078WP38799 552 aa3.92□□□□□ -1.78
CHD1YER164W SHU2P38957 223 aa3.92□□□□□ -1.78
CHD1YER164W YCK3P39962 524 aa3.92□□□□□ -1.78
CHD1YER164W YGL176CP46945 554 aa3.92□□□□□ -1.78
CHD1YER164W URB2P47108 1174 aa3.92□□□□□ -1.78
CHD1YER164W FOB1O13329 566 aa3.92□□□□□ -1.78
CHD1YER164W IME1P21190 360 aa3.92□□□□□ -1.78
CHD1YER164W PDB1P32473 366 aaKnown RBP3.92□□□□□ -1.78
CHD1YER164W CAB2P40506 365 aa3.92□□□□□ -1.78
CHD1YER164W LAM5P43560 674 aa3.92□□□□□ -1.78
CHD1YER164W SCS3P53012 380 aa3.92□□□□□ -1.78
CHD1YER164W BNI4P53858 892 aa3.92□□□□□ -1.78
CHD1YER164W UBX4P54730 416 aa3.92□□□□□ -1.78
CHD1YER164W MSH6Q03834 1242 aa3.92□□□□□ -1.78
CHD1YER164W ADH4P10127 382 aa3.92□□□□□ -1.78
CHD1YER164W ERG11P10614 530 aa3.92□□□□□ -1.78
CHD1YER164W RRN3P36070 627 aa3.92□□□□□ -1.78
CHD1YER164W IRR1P40541 1150 aa3.92□□□□□ -1.78
CHD1YER164W NGL3Q03210 505 aa3.92□□□□□ -1.78
CHD1YER164W NOB1Q08444 459 aaKnown RBP3.92□□□□□ -1.78
CHD1YER164W ARG4P04076 463 aaPredicted RBP3.91□□□□□ -1.78
CHD1YER164W PDC5P16467 563 aaKnown RBP3.91□□□□□ -1.78
CHD1YER164W SRV2P17555 526 aaKnown RBP3.91□□□□□ -1.78
CHD1YER164W AIM21P40563 679 aa3.91□□□□□ -1.78
CHD1YER164W SWP82P43554 623 aa3.91□□□□□ -1.78
CHD1YER164W EEB1Q02891 456 aa3.91□□□□□ -1.78
CHD1YER164W YML082WQ04533 649 aaKnown RBP3.91□□□□□ -1.78
CHD1YER164W SFH1Q06168 426 aa3.91□□□□□ -1.78
CHD1YER164W CRD1Q07560 283 aa3.91□□□□□ -1.78
CHD1YER164W FAL1Q12099 399 aaKnown RBP3.91□□□□□ -1.78
CHD1YER164W SLP1Q12232 587 aa3.91□□□□□ -1.78
CHD1YER164W HIF1Q12373 385 aa3.91□□□□□ -1.78
CHD1YER164W EMP46Q12396 444 aa3.91□□□□□ -1.78
CHD1YER164W GLC3P32775 704 aa3.91□□□□□ -1.78
CHD1YER164W RRN6P32786 894 aa3.91□□□□□ -1.78
CHD1YER164W SEC6P32844 805 aa3.91□□□□□ -1.78
CHD1YER164W ARB1P40024 610 aaKnown RBP3.91□□□□□ -1.78
CHD1YER164W CWC25P53854 179 aaKnown RBP3.91□□□□□ -1.78
CHD1YER164W YCS4Q06156 1176 aa3.91□□□□□ -1.78
CHD1YER164W CLN3P13365 580 aa3.91□□□□□ -1.78
CHD1YER164W RPN3P40016 523 aaKnown RBP3.91□□□□□ -1.78
CHD1YER164W YJR039WP47107 1121 aa3.91□□□□□ -1.78
CHD1YER164W SHR3Q02774 210 aa3.91□□□□□ -1.78
CHD1YER164W ISA1Q07821 250 aaPredicted RBP3.91□□□□□ -1.78
CHD1YER164W MLH2Q07980 695 aa3.91□□□□□ -1.78
CHD1YER164W TRE2Q08693 809 aa3.91□□□□□ -1.78
CHD1YER164W SSB1P11484 613 aaKnown RBP3.9□□□□□ -1.78
CHD1YER164W DPB2P24482 689 aaPredicted RBP3.9□□□□□ -1.78
CHD1YER164W KIP1P28742 1111 aa3.9□□□□□ -1.78
CHD1YER164W SEC21P32074 935 aaKnown RBP3.9□□□□□ -1.78
CHD1YER164W RPC34P32910 317 aa3.9□□□□□ -1.78
CHD1YER164W YKR015CP36111 568 aa3.9□□□□□ -1.78
CHD1YER164W SSB2P40150 613 aaKnown RBP3.9□□□□□ -1.78
CHD1YER164W LCB2P40970 561 aa3.9□□□□□ -1.78
CHD1YER164W CCT7P42943 550 aaKnown RBP3.9□□□□□ -1.78
CHD1YER164W INP52P50942 1183 aa3.9□□□□□ -1.78
CHD1YER164W TAF6P53040 516 aa3.9□□□□□ -1.78
CHD1YER164W UBX5Q06682 500 aa3.9□□□□□ -1.78
CHD1YER164W RRP36Q12481 300 aaPredicted RBP3.9□□□□□ -1.78
CHD1YER164W MVD1P32377 396 aaKnown RBP3.9□□□□□ -1.78
CHD1YER164W MEI5P32489 222 aa3.9□□□□□ -1.78
CHD1YER164W UTR4P32626 227 aa3.9□□□□□ -1.78
CHD1YER164W UGA4P32837 571 aa3.9□□□□□ -1.78
CHD1YER164W UBP13P38187 747 aa3.9□□□□□ -1.78
CHD1YER164W POP4P38336 279 aa3.9□□□□□ -1.78
CHD1YER164W ERP5P38819 212 aa3.9□□□□□ -1.78
CHD1YER164W PCL10P53124 433 aa3.9□□□□□ -1.78
CHD1YER164W LIF1P53150 421 aa3.9□□□□□ -1.78
CHD1YER164W FAP1P53971 965 aa3.9□□□□□ -1.78
CHD1YER164W PPN1Q04119 674 aa3.9□□□□□ -1.78
CHD1YER164W DAS2Q12084 232 aa3.9□□□□□ -1.78
CHD1YER164W CSR2Q12734 1121 aa3.9□□□□□ -1.78
CHD1YER164W REP1P03871 373 aa3.9□□□□□ -1.79
CHD1YER164W PYC1P11154 1178 aaKnown RBP3.9□□□□□ -1.79
CHD1YER164W CHS2P14180 963 aa3.9□□□□□ -1.79
CHD1YER164W DBF4P32325 704 aa3.9□□□□□ -1.79
CHD1YER164W VMA8P32610 256 aaKnown RBP3.9□□□□□ -1.79
CHD1YER164W RIB7P33312 244 aa3.9□□□□□ -1.79
CHD1YER164W IXR1P33417 597 aa3.9□□□□□ -1.79
CHD1YER164W CLU1Q03690 1277 aaKnown RBP3.9□□□□□ -1.79
CHD1YER164W YMR018WQ04364 514 aa3.9□□□□□ -1.79
CHD1YER164W FUS2Q05670 677 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms