RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W SGS1P35187 1447 aa6.35□□□□□ -1.39
CHD1YER164W SSN2P38931 1420 aa6.05□□□□□ -1.44
CHD1YER164W INO80P53115 1489 aa6.04□□□□□ -1.44
CHD1YER164W TCB3Q03640 1545 aaKnown RBP6□□□□□ -1.45
CHD1YER164W TY1B-DR4Q07793 1604 aa5.96□□□□□ -1.46
CHD1YER164W SPA2P23201 1466 aaKnown RBP5.95□□□□□ -1.46
CHD1YER164W MON2P48563 1636 aaPredicted RBP5.93□□□□□ -1.46
CHD1YER164W HSL1P34244 1518 aa5.91□□□□□ -1.46
CHD1YER164W DRS1P32892 752 aaKnown RBP5.91□□□□□ -1.46
CHD1YER164W SPT6P23615 1451 aaKnown RBP5.9□□□□□ -1.46
CHD1YER164W SWR1Q05471 1514 aa5.88□□□□□ -1.47
CHD1YER164W XRN1P22147 1528 aaKnown RBP5.82□□□□□ -1.48
CHD1YER164W HIR3P47171 1648 aa5.81□□□□□ -1.48
CHD1YER164W TAF2P23255 1407 aa5.8□□□□□ -1.48
CHD1YER164W DNA2P38859 1522 aa5.77□□□□□ -1.49
CHD1YER164W REV3P14284 1504 aa5.68□□□□□ -1.5
CHD1YER164W ECM5Q03214 1411 aa5.67□□□□□ -1.5
CHD1YER164W KOG1P38873 1557 aa5.62□□□□□ -1.51
CHD1YER164W SKI3P17883 1432 aaKnown RBP5.62□□□□□ -1.51
CHD1YER164W BUD4P47136 1447 aa5.58□□□□□ -1.52
CHD1YER164W SSK2P53599 1579 aa5.57□□□□□ -1.52
CHD1YER164W THO2P53552 1597 aaKnown RBP5.54□□□□□ -1.52
CHD1YER164W SIN3P22579 1536 aa5.54□□□□□ -1.52
CHD1YER164W RSE1Q04693 1361 aaKnown RBP5.53□□□□□ -1.52
CHD1YER164W ATG2P53855 1592 aa5.53□□□□□ -1.52
CHD1YER164W SAS10Q12136 610 aaPredicted RBP5.53□□□□□ -1.52
CHD1YER164W ESP1Q03018 1630 aa5.53□□□□□ -1.52
CHD1YER164W STU1P38198 1513 aa5.5□□□□□ -1.53
CHD1YER164W MDS3P53094 1487 aa5.49□□□□□ -1.53
CHD1YER164W PEP1P32319 1579 aa5.48□□□□□ -1.53
CHD1YER164W BPT1P14772 1559 aa5.47□□□□□ -1.53
CHD1YER164W RQC2Q12532 1038 aaKnown RBP5.46□□□□□ -1.54
CHD1YER164W UFD4P33202 1483 aa5.44□□□□□ -1.54
CHD1YER164W MYO2P19524 1574 aaKnown RBP5.44□□□□□ -1.54
CHD1YER164W SCC2Q04002 1493 aa5.43□□□□□ -1.54
CHD1YER164W YPK9Q12697 1472 aa5.43□□□□□ -1.54
CHD1YER164W POL1P13382 1468 aa5.43□□□□□ -1.54
CHD1YER164W MMS22Q06164 1454 aa5.41□□□□□ -1.54
CHD1YER164W RKR1Q04781 1562 aa5.39□□□□□ -1.55
CHD1YER164W MTC1P47018 478 aaKnown RBP5.38□□□□□ -1.55
CHD1YER164W RPO31P04051 1460 aa5.37□□□□□ -1.55
CHD1YER164W IFH1P39520 1085 aa5.35□□□□□ -1.55
CHD1YER164W YCF1P39109 1515 aaKnown RBP5.35□□□□□ -1.55
CHD1YER164W YOR1P53049 1477 aa5.34□□□□□ -1.55
CHD1YER164W TOP2P06786 1428 aaKnown RBP5.34□□□□□ -1.55
CHD1YER164W YTA7P40340 1379 aa5.34□□□□□ -1.55
CHD1YER164W TY2B-LR1P0C2J3 1770 aa5.34□□□□□ -1.55
CHD1YER164W TY2B-FP0CX63 1770 aa5.34□□□□□ -1.55
CHD1YER164W TY2B-GR2P0CX64 1770 aa5.34□□□□□ -1.55
CHD1YER164W TY2B-CP25384 1770 aa5.34□□□□□ -1.55
CHD1YER164W TY2B-DR2Q03494 1770 aa5.34□□□□□ -1.55
CHD1YER164W TY1B-DR1Q03855 1755 aa5.34□□□□□ -1.55
CHD1YER164W TY2B-DR3Q07791 1770 aaKnown RBP5.34□□□□□ -1.55
CHD1YER164W TY2B-OR1Q12113 1770 aa5.34□□□□□ -1.55
CHD1YER164W TY2B-DR1Q12472 1770 aa5.34□□□□□ -1.55
CHD1YER164W TY2B-OR2Q12501 1770 aa5.34□□□□□ -1.55
CHD1YER164W STH1P32597 1359 aa5.32□□□□□ -1.56
CHD1YER164W TY1B-DR3Q99231 1755 aa5.31□□□□□ -1.56
CHD1YER164W TY2B-BQ12491 1770 aa5.29□□□□□ -1.56
CHD1YER164W CHD1P32657 1468 aa5.29□□□□□ -1.56
CHD1YER164W TRM732Q03496 1420 aa5.28□□□□□ -1.56
CHD1YER164W SMC4Q12267 1418 aa5.28□□□□□ -1.56
CHD1YER164W SNQ2P32568 1501 aaKnown RBP5.27□□□□□ -1.57
CHD1YER164W SPP41P38904 1435 aa5.26□□□□□ -1.57
CHD1YER164W MYO4P32492 1471 aa5.25□□□□□ -1.57
CHD1YER164W TY1B-BRQ12193 1756 aa5.24□□□□□ -1.57
CHD1YER164W TY1B-GR3Q12316 1755 aa5.24□□□□□ -1.57
CHD1YER164W TY1B-ORQ92393 1755 aa5.24□□□□□ -1.57
CHD1YER164W PDR15Q04182 1529 aaKnown RBP5.23□□□□□ -1.57
CHD1YER164W TY1B-HO13535 1793 aa5.23□□□□□ -1.57
CHD1YER164W TY1B-DR5P0C2I2 1755 aa5.23□□□□□ -1.57
CHD1YER164W TY1B-DR6P0C2I3 1755 aa5.23□□□□□ -1.57
CHD1YER164W TY1B-LR2P0C2I5 1755 aa5.23□□□□□ -1.57
CHD1YER164W TY1B-LR3P0C2I6 1755 aaKnown RBP5.23□□□□□ -1.57
CHD1YER164W TY1B-PR1P0C2I9 1755 aaKnown RBP5.23□□□□□ -1.57
CHD1YER164W TY1B-PR2P0C2J0 1756 aa5.23□□□□□ -1.57
CHD1YER164W TY1B-PR3P0C2J1 1755 aaKnown RBP5.23□□□□□ -1.57
CHD1YER164W TY1B-JR1P47098 1755 aa5.23□□□□□ -1.57
CHD1YER164W TY1B-ML2Q03434 1755 aaKnown RBP5.23□□□□□ -1.57
CHD1YER164W TY1B-ER1Q03612 1755 aa5.23□□□□□ -1.57
CHD1YER164W TY1B-ML1Q04711 1755 aaKnown RBP5.23□□□□□ -1.57
CHD1YER164W TY1B-GR2Q12269 1755 aa5.23□□□□□ -1.57
CHD1YER164W TY1B-OLQ12273 1755 aa5.23□□□□□ -1.57
CHD1YER164W TY1B-PLQ12414 1755 aaKnown RBP5.23□□□□□ -1.57
CHD1YER164W SSM4P40318 1319 aa5.23□□□□□ -1.57
CHD1YER164W DNF1P32660 1571 aa5.22□□□□□ -1.57
CHD1YER164W TSC11P40061 1430 aa5.22□□□□□ -1.57
CHD1YER164W ESC1Q03661 1658 aaKnown RBP5.22□□□□□ -1.57
CHD1YER164W CDC25P04821 1589 aa5.21□□□□□ -1.58
CHD1YER164W GEA1P47102 1408 aaPredicted RBP5.21□□□□□ -1.58
CHD1YER164W NOP2P40991 618 aaKnown RBP5.21□□□□□ -1.58
CHD1YER164W PAN1P32521 1480 aa5.2□□□□□ -1.58
CHD1YER164W VTH1P40438 1549 aa5.19□□□□□ -1.58
CHD1YER164W VTH2P40890 1549 aa5.19□□□□□ -1.58
CHD1YER164W MLP2P40457 1679 aa5.19□□□□□ -1.58
CHD1YER164W IKI3Q06706 1349 aaKnown RBP5.19□□□□□ -1.58
CHD1YER164W ULS1Q08562 1619 aa5.18□□□□□ -1.58
CHD1YER164W RTT106P40161 455 aa5.17□□□□□ -1.58
CHD1YER164W TAF7Q05021 590 aa5.17□□□□□ -1.58
CHD1YER164W TY1B-JR2P47100 1755 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms