RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W VPS53P47061 822 aa5.3□□□□□ -1.56
CDC28YBR160W RAT1Q02792 1006 aaKnown RBP5.3□□□□□ -1.56
CDC28YBR160W YML119WQ03208 357 aa5.3□□□□□ -1.56
CDC28YBR160W VTI1Q04338 217 aa5.3□□□□□ -1.56
CDC28YBR160W YDR338CQ05497 695 aa5.3□□□□□ -1.56
CDC28YBR160W MRD1Q06106 887 aaKnown RBP5.3□□□□□ -1.56
CDC28YBR160W TFC6Q06339 672 aa5.3□□□□□ -1.56
CDC28YBR160W TDA5Q06417 326 aaKnown RBP5.3□□□□□ -1.56
CDC28YBR160W MRL1Q06815 381 aa5.3□□□□□ -1.56
CDC28YBR160W HRK1Q08732 759 aaKnown RBP5.3□□□□□ -1.56
CDC28YBR160W RTT10Q08924 1013 aa5.3□□□□□ -1.56
CDC28YBR160W RRI2Q12348 645 aa5.3□□□□□ -1.56
CDC28YBR160W NBL1Q3E7Y6 73 aa5.3□□□□□ -1.56
CDC28YBR160W RIM15P43565 1770 aa5.29□□□□□ -1.56
CDC28YBR160W CYB2P00175 591 aa5.29□□□□□ -1.56
CDC28YBR160W DED1P06634 604 aaKnown RBP5.29□□□□□ -1.56
CDC28YBR160W COQ1P18900 473 aa5.29□□□□□ -1.56
CDC28YBR160W GCG1P32656 232 aaKnown RBP5.29□□□□□ -1.56
CDC28YBR160W LIP5P32875 414 aa5.29□□□□□ -1.56
CDC28YBR160W YKL133CP36066 463 aa5.29□□□□□ -1.56
CDC28YBR160W MAL31P38156 614 aa5.29□□□□□ -1.56
CDC28YBR160W ALG3P38179 458 aa5.29□□□□□ -1.56
CDC28YBR160W NMD3P38861 518 aaKnown RBP5.29□□□□□ -1.56
CDC28YBR160W MRX1P40050 688 aa5.29□□□□□ -1.56
CDC28YBR160W FAA4P47912 694 aaKnown RBP5.29□□□□□ -1.56
CDC28YBR160W SPP382Q06411 708 aaPredicted RBP5.29□□□□□ -1.56
CDC28YBR160W TRE1Q08919 783 aa5.29□□□□□ -1.56
CDC28YBR160W PLP2Q12017 286 aa5.29□□□□□ -1.56
CDC28YBR160W DAS2Q12084 232 aa5.29□□□□□ -1.56
CDC28YBR160W TOM70P07213 617 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W PPR1P07272 904 aaPredicted RBP5.28□□□□□ -1.56
CDC28YBR160W RPB2P08518 1224 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W GAL11P19659 1081 aa5.28□□□□□ -1.56
CDC28YBR160W PAP1P29468 568 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W PDB1P32473 366 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W GRX7P38068 203 aa5.28□□□□□ -1.56
CDC28YBR160W ATG14P38270 344 aa5.28□□□□□ -1.56
CDC28YBR160W RRP8P38961 392 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W LYS14P40971 790 aa5.28□□□□□ -1.56
CDC28YBR160W ALG2P43636 503 aa5.28□□□□□ -1.56
CDC28YBR160W YJR039WP47107 1121 aa5.28□□□□□ -1.56
CDC28YBR160W ORC3P54790 616 aa5.28□□□□□ -1.56
CDC28YBR160W RPS15Q01855 142 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W UME1Q03010 460 aa5.28□□□□□ -1.56
CDC28YBR160W RPN4Q03465 531 aa5.28□□□□□ -1.56
CDC28YBR160W YAP7Q08182 245 aa5.28□□□□□ -1.56
CDC28YBR160W OPI10Q08202 246 aa5.28□□□□□ -1.56
CDC28YBR160W TMA46Q12000 345 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W FAL1Q12099 399 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W RIO1Q12196 484 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W TIP41Q12199 356 aa5.28□□□□□ -1.56
CDC28YBR160W LPX1Q12405 387 aaKnown RBP5.28□□□□□ -1.56
CDC28YBR160W NSI1Q12457 570 aa5.28□□□□□ -1.56
CDC28YBR160W SMC6Q12749 1114 aa5.28□□□□□ -1.56
CDC28YBR160W GLT1Q12680 2145 aaKnown RBP5.27□□□□□ -1.57
CDC28YBR160W RNR3P21672 869 aaKnown RBP5.27□□□□□ -1.57
CDC28YBR160W SEC14P24280 304 aaKnown RBP5.27□□□□□ -1.57
CDC28YBR160W RAD5P32849 1169 aaPredicted RBP5.27□□□□□ -1.57
CDC28YBR160W LOS1P33418 1100 aaPredicted RBP5.27□□□□□ -1.57
CDC28YBR160W MYO3P36006 1272 aa5.27□□□□□ -1.57
CDC28YBR160W LAS1P36146 502 aaPredicted RBP5.27□□□□□ -1.57
CDC28YBR160W PCI8P40512 444 aa5.27□□□□□ -1.57
CDC28YBR160W VTC2P43585 828 aa5.27□□□□□ -1.57
CDC28YBR160W TIM54P47045 478 aa5.27□□□□□ -1.57
CDC28YBR160W ILM1P47155 203 aa5.27□□□□□ -1.57
CDC28YBR160W VPS4P52917 437 aa5.27□□□□□ -1.57
CDC28YBR160W YGR053CP53234 283 aa5.27□□□□□ -1.57
CDC28YBR160W BTN2P53286 410 aa5.27□□□□□ -1.57
CDC28YBR160W NAN1Q02931 896 aaKnown RBP5.27□□□□□ -1.57
CDC28YBR160W SOV1Q04748 898 aa5.27□□□□□ -1.57
CDC28YBR160W OPY2Q06810 360 aa5.27□□□□□ -1.57
CDC28YBR160W BDF2Q07442 638 aa5.27□□□□□ -1.57
CDC28YBR160W SDH5Q08230 162 aa5.27□□□□□ -1.57
CDC28YBR160W TUS1Q06412 1307 aa5.26□□□□□ -1.57
CDC28YBR160W FOB1O13329 566 aa5.26□□□□□ -1.57
CDC28YBR160W CIT2P08679 460 aa5.26□□□□□ -1.57
CDC28YBR160W MRPS28P21771 286 aa5.26□□□□□ -1.57
CDC28YBR160W MAK31P23059 88 aa5.26□□□□□ -1.57
CDC28YBR160W CDC60P26637 1090 aaKnown RBP5.26□□□□□ -1.57
CDC28YBR160W KIP1P28742 1111 aa5.26□□□□□ -1.57
CDC28YBR160W PSO2P30620 661 aa5.26□□□□□ -1.57
CDC28YBR160W NIP1P32497 812 aaKnown RBP5.26□□□□□ -1.57
CDC28YBR160W ZUO1P32527 433 aaKnown RBP5.26□□□□□ -1.57
CDC28YBR160W ANP1P32629 500 aa5.26□□□□□ -1.57
CDC28YBR160W CBF5P33322 483 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
CDC28YBR160W HEL1P36113 551 aa5.26□□□□□ -1.57
CDC28YBR160W YKR018CP36114 725 aa5.26□□□□□ -1.57
CDC28YBR160W UGA2P38067 497 aa5.26□□□□□ -1.57
CDC28YBR160W OLA1P38219 394 aaKnown RBP5.26□□□□□ -1.57
CDC28YBR160W SPP381P38282 291 aaPredicted RBP5.26□□□□□ -1.57
CDC28YBR160W SMC2P38989 1170 aaKnown RBP5.26□□□□□ -1.57
CDC28YBR160W THI6P41835 540 aa5.26□□□□□ -1.57
CDC28YBR160W HUL5P53119 910 aa5.26□□□□□ -1.57
CDC28YBR160W YGL138CP53122 345 aa5.26□□□□□ -1.57
CDC28YBR160W HDA1P53973 706 aa5.26□□□□□ -1.57
CDC28YBR160W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
CDC28YBR160W EEB1Q02891 456 aa5.26□□□□□ -1.57
CDC28YBR160W VPS30Q02948 557 aa5.26□□□□□ -1.57
CDC28YBR160W SSY1Q03770 852 aa5.26□□□□□ -1.57
CDC28YBR160W FIG2P25653 1609 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms