RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W BET3P36149 193 aa2.21□□□□□ -2.06
CUL3YGR003W YBR053CP38235 358 aa2.21□□□□□ -2.06
CUL3YGR003W YJL206CP39529 758 aa2.21□□□□□ -2.06
CUL3YGR003W TOK1P40310 691 aa2.21□□□□□ -2.06
CUL3YGR003W SDP1P40479 209 aa2.21□□□□□ -2.06
CUL3YGR003W YKE2P52553 114 aa2.21□□□□□ -2.06
CUL3YGR003W RTA1P53047 317 aa2.21□□□□□ -2.06
CUL3YGR003W SSL2Q00578 843 aa2.21□□□□□ -2.06
CUL3YGR003W NAN1Q02931 896 aaKnown RBP2.21□□□□□ -2.06
CUL3YGR003W YPR071WQ12346 211 aa2.21□□□□□ -2.06
CUL3YGR003W HBN1Q96VH4 193 aa2.21□□□□□ -2.06
CUL3YGR003W STE4P18851 423 aa2.2□□□□□ -2.06
CUL3YGR003W YEL020CP39994 560 aa2.2□□□□□ -2.06
CUL3YGR003W AMA1P50082 593 aa2.2□□□□□ -2.06
CUL3YGR003W MSD1P15179 658 aaKnown RBP2.19□□□□□ -2.06
CUL3YGR003W VPS34P22543 875 aa2.19□□□□□ -2.06
CUL3YGR003W RPD3P32561 433 aa2.19□□□□□ -2.06
CUL3YGR003W EMP70P32802 667 aa2.19□□□□□ -2.06
CUL3YGR003W OCA5P38738 679 aa2.19□□□□□ -2.06
CUL3YGR003W RSP5P39940 809 aaKnown RBP2.19□□□□□ -2.06
CUL3YGR003W SIT1P39980 628 aa2.19□□□□□ -2.06
CUL3YGR003W TIM54P47045 478 aa2.19□□□□□ -2.06
CUL3YGR003W GYP7P48365 746 aa2.19□□□□□ -2.06
CUL3YGR003W UTP8P53276 713 aaKnown RBP2.19□□□□□ -2.06
CUL3YGR003W SRP1Q02821 542 aaKnown RBP2.19□□□□□ -2.06
CUL3YGR003W EAF1Q06337 982 aa2.19□□□□□ -2.06
CUL3YGR003W SGO1Q08490 590 aa2.19□□□□□ -2.06
CUL3YGR003W FLC1Q08967 793 aa2.19□□□□□ -2.06
CUL3YGR003W NOT3P06102 836 aaKnown RBP2.19□□□□□ -2.06
CUL3YGR003W FBP1P09201 348 aa2.19□□□□□ -2.06
CUL3YGR003W AAR2P32357 355 aaPredicted RBP2.19□□□□□ -2.06
CUL3YGR003W YRO2P38079 344 aa2.19□□□□□ -2.06
CUL3YGR003W LTP1P40347 161 aa2.19□□□□□ -2.06
CUL3YGR003W TAF8Q03750 510 aa2.19□□□□□ -2.06
CUL3YGR003W ERR1P0CX10 437 aa2.18□□□□□ -2.06
CUL3YGR003W ERR2P0CX11 437 aa2.18□□□□□ -2.06
CUL3YGR003W PPH3P32345 308 aa2.18□□□□□ -2.06
CUL3YGR003W YGR125WP53273 1036 aa2.18□□□□□ -2.06
CUL3YGR003W NSE3Q05541 303 aa2.18□□□□□ -2.06
CUL3YGR003W CIR2Q08822 631 aa2.18□□□□□ -2.06
CUL3YGR003W TAF3Q12297 353 aa2.18□□□□□ -2.06
CUL3YGR003W YLR149CQ99296 730 aa2.18□□□□□ -2.06
CUL3YGR003W CIT1P00890 479 aa2.18□□□□□ -2.06
CUL3YGR003W ARE1P25628 610 aa2.18□□□□□ -2.06
CUL3YGR003W YBR238CP38330 731 aaKnown RBP2.18□□□□□ -2.06
CUL3YGR003W TY4A-JP47023 414 aa2.18□□□□□ -2.06
CUL3YGR003W IRC13Q08630 104 aa2.18□□□□□ -2.06
CUL3YGR003W CAN1P04817 590 aa2.17□□□□□ -2.06
CUL3YGR003W STE13P33894 931 aa2.17□□□□□ -2.06
CUL3YGR003W PET10P36139 283 aa2.17□□□□□ -2.06
CUL3YGR003W SNF7P39929 240 aaKnown RBP2.17□□□□□ -2.06
CUL3YGR003W GYP8P43570 497 aa2.17□□□□□ -2.06
CUL3YGR003W HDA1P53973 706 aa2.17□□□□□ -2.06
CUL3YGR003W VPS30Q02948 557 aa2.17□□□□□ -2.06
CUL3YGR003W PRP9P19736 530 aaKnown RBP2.17□□□□□ -2.06
CUL3YGR003W HSP60P19882 572 aaKnown RBP2.17□□□□□ -2.06
CUL3YGR003W CDC48P25694 835 aaKnown RBP2.17□□□□□ -2.06
CUL3YGR003W XBP1P40489 647 aa2.17□□□□□ -2.06
CUL3YGR003W MAL11P53048 616 aa2.17□□□□□ -2.06
CUL3YGR003W ERP6P53198 216 aa2.17□□□□□ -2.06
CUL3YGR003W SMX3P54999 86 aaPredicted RBP2.17□□□□□ -2.06
CUL3YGR003W LCD1Q04377 747 aa2.17□□□□□ -2.06
CUL3YGR003W OSW1Q08692 278 aa2.17□□□□□ -2.06
CUL3YGR003W ENV7Q12003 364 aa2.17□□□□□ -2.06
CUL3YGR003W CDC53Q12018 815 aaKnown RBP2.17□□□□□ -2.06
CUL3YGR003W YOL098CQ12496 1037 aa2.17□□□□□ -2.06
CUL3YGR003W TIM23P32897 222 aa2.16□□□□□ -2.06
CUL3YGR003W HIS7P33734 552 aaKnown RBP2.16□□□□□ -2.06
CUL3YGR003W YKR078WP36158 585 aaKnown RBP2.16□□□□□ -2.06
CUL3YGR003W CTF8P38877 133 aa2.16□□□□□ -2.06
CUL3YGR003W YIL108WP40483 696 aaKnown RBP2.16□□□□□ -2.06
CUL3YGR003W BUD6P41697 788 aa2.16□□□□□ -2.06
CUL3YGR003W CCT7P42943 550 aaKnown RBP2.16□□□□□ -2.06
CUL3YGR003W SPO75Q07798 868 aa2.16□□□□□ -2.06
CUL3YGR003W ADE8P04161 214 aa2.15□□□□□ -2.06
CUL3YGR003W YCL002CP25565 263 aa2.15□□□□□ -2.06
CUL3YGR003W PBP2P38151 413 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
CUL3YGR003W UBP6P43593 499 aaKnown RBP2.15□□□□□ -2.06
CUL3YGR003W GIS2P53849 153 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
CUL3YGR003W PRP4P20053 465 aaKnown RBP2.15□□□□□ -2.07
CUL3YGR003W REC104P33323 182 aa2.15□□□□□ -2.07
CUL3YGR003W PAC2P39937 518 aa2.15□□□□□ -2.07
CUL3YGR003W FMP52P40008 231 aa2.15□□□□□ -2.07
CUL3YGR003W NNF1P47149 201 aa2.15□□□□□ -2.07
CUL3YGR003W HSV2P50079 448 aaPredicted RBP2.15□□□□□ -2.07
CUL3YGR003W TEL2P53038 688 aa2.15□□□□□ -2.07
CUL3YGR003W OSH2Q12451 1283 aa2.15□□□□□ -2.07
CUL3YGR003W CIT2P08679 460 aa2.14□□□□□ -2.07
CUL3YGR003W YIR042CP40586 236 aa2.14□□□□□ -2.07
CUL3YGR003W CEP3P40969 608 aa2.14□□□□□ -2.07
CUL3YGR003W KRI1P42846 591 aaKnown RBP2.14□□□□□ -2.07
CUL3YGR003W YJL049WP47048 450 aa2.14□□□□□ -2.07
CUL3YGR003W LRS4Q04087 347 aaKnown RBP2.14□□□□□ -2.07
CUL3YGR003W ERG11P10614 530 aa2.14□□□□□ -2.07
CUL3YGR003W URA1P28272 314 aaPredicted RBP2.14□□□□□ -2.07
CUL3YGR003W YGR283CP53336 341 aaPredicted RBP2.14□□□□□ -2.07
CUL3YGR003W RPN4Q03465 531 aa2.14□□□□□ -2.07
CUL3YGR003W HAL9Q12180 1030 aa2.14□□□□□ -2.07
CUL3YGR003W STI1P15705 589 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
CUL3YGR003W SRP40P32583 406 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms