RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C ERV41Q04651 352 aa6.93□□□□□ -1.3
YPT1YFL038C FRA1Q07825 749 aa6.93□□□□□ -1.3
YPT1YFL038C YPL225WQ08971 146 aaKnown RBP6.93□□□□□ -1.3
YPT1YFL038C SLX4Q12098 748 aa6.93□□□□□ -1.3
YPT1YFL038C SEY1Q99287 776 aa6.93□□□□□ -1.3
YPT1YFL038C SPT2P06843 333 aaPredicted RBP6.92□□□□□ -1.3
YPT1YFL038C FBP1P09201 348 aa6.92□□□□□ -1.3
YPT1YFL038C PRP16P15938 1071 aaPredicted RBP6.92□□□□□ -1.3
YPT1YFL038C CAP1P28495 268 aaKnown RBP6.92□□□□□ -1.3
YPT1YFL038C PLC1P32383 869 aa6.92□□□□□ -1.3
YPT1YFL038C GCD6P32501 712 aaKnown RBP6.92□□□□□ -1.3
YPT1YFL038C LOS1P33418 1100 aaPredicted RBP6.92□□□□□ -1.3
YPT1YFL038C SQT1P35184 431 aa6.92□□□□□ -1.3
YPT1YFL038C TIF5P38431 405 aaKnown RBP6.92□□□□□ -1.3
YPT1YFL038C ERC1P38767 581 aa6.92□□□□□ -1.3
YPT1YFL038C END3P39013 349 aa6.92□□□□□ -1.3
YPT1YFL038C HMF1P40037 129 aaKnown RBP6.92□□□□□ -1.3
YPT1YFL038C INA22P40576 216 aa6.92□□□□□ -1.3
YPT1YFL038C YJL007CP47080 104 aa6.92□□□□□ -1.3
YPT1YFL038C HUL5P53119 910 aa6.92□□□□□ -1.3
YPT1YFL038C YGL039WP53183 348 aaKnown RBP6.92□□□□□ -1.3
YPT1YFL038C YGR111WP53265 400 aa6.92□□□□□ -1.3
YPT1YFL038C ROD1Q02805 837 aa6.92□□□□□ -1.3
YPT1YFL038C UBX5Q06682 500 aa6.92□□□□□ -1.3
YPT1YFL038C SDH5Q08230 162 aa6.92□□□□□ -1.3
YPT1YFL038C RPS3P05750 240 aaKnown RBP6.91□□□□□ -1.3
YPT1YFL038C PRE10P21242 288 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
YPT1YFL038C DBF4P32325 704 aa6.91□□□□□ -1.3
YPT1YFL038C YBL055CP34220 418 aaPredicted RBP6.91□□□□□ -1.3
YPT1YFL038C CSG2P35206 410 aa6.91□□□□□ -1.3
YPT1YFL038C OCT1P35999 772 aa6.91□□□□□ -1.3
YPT1YFL038C YKR018CP36114 725 aa6.91□□□□□ -1.3
YPT1YFL038C NCL1P38205 684 aaKnown RBP6.91□□□□□ -1.3
YPT1YFL038C ECM2P38241 364 aaKnown RBP6.91□□□□□ -1.3
YPT1YFL038C NPP2P39997 493 aa6.91□□□□□ -1.3
YPT1YFL038C MRX1P40050 688 aa6.91□□□□□ -1.3
YPT1YFL038C ASG1P40467 964 aa6.91□□□□□ -1.3
YPT1YFL038C URB2P47108 1174 aa6.91□□□□□ -1.3
YPT1YFL038C CLA4P48562 842 aa6.91□□□□□ -1.3
YPT1YFL038C CTR1P49573 406 aa6.91□□□□□ -1.3
YPT1YFL038C CPR6P53691 371 aaKnown RBP6.91□□□□□ -1.3
YPT1YFL038C RPA49Q01080 415 aaPredicted RBP6.91□□□□□ -1.3
YPT1YFL038C YDR222WQ04925 415 aa6.91□□□□□ -1.3
YPT1YFL038C YDR278CQ05612 105 aa6.91□□□□□ -1.3
YPT1YFL038C DUS3Q06053 668 aaKnown RBP6.91□□□□□ -1.3
YPT1YFL038C PIG1Q06216 648 aa6.91□□□□□ -1.3
YPT1YFL038C SMC5Q08204 1093 aa6.91□□□□□ -1.3
YPT1YFL038C TAF10Q12030 206 aa6.91□□□□□ -1.3
YPT1YFL038C NCA2Q12374 616 aa6.91□□□□□ -1.3
YPT1YFL038C ADE3P07245 946 aaKnown RBP6.9□□□□□ -1.3
YPT1YFL038C VMA1P17255 1071 aaKnown RBP6.9□□□□□ -1.3
YPT1YFL038C SFL1P20134 766 aa6.9□□□□□ -1.3
YPT1YFL038C SCJ1P25303 377 aa6.9□□□□□ -1.3
YPT1YFL038C CDC11P32458 415 aa6.9□□□□□ -1.3
YPT1YFL038C PIN4P34217 668 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
YPT1YFL038C RPC37P36121 282 aa6.9□□□□□ -1.3
YPT1YFL038C TVP38P36164 337 aa6.9□□□□□ -1.3
YPT1YFL038C PMC1P38929 1173 aaPredicted RBP6.9□□□□□ -1.3
YPT1YFL038C VAB2P40003 282 aa6.9□□□□□ -1.3
YPT1YFL038C PHO86P46956 311 aa6.9□□□□□ -1.3
YPT1YFL038C SHE10P53075 577 aa6.9□□□□□ -1.3
YPT1YFL038C PPM1Q04081 328 aa6.9□□□□□ -1.3
YPT1YFL038C PNP1Q05788 311 aa6.9□□□□□ -1.3
YPT1YFL038C NOC3Q07896 663 aaPredicted RBP6.9□□□□□ -1.3
YPT1YFL038C YML002WP0CF17 737 aa6.89□□□□□ -1.31
YPT1YFL038C CDC42P19073 191 aa6.89□□□□□ -1.31
YPT1YFL038C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
YPT1YFL038C DAL2P25335 343 aa6.89□□□□□ -1.31
YPT1YFL038C SWI3P32591 825 aa6.89□□□□□ -1.31
YPT1YFL038C RTG2P32608 588 aaKnown RBP6.89□□□□□ -1.31
YPT1YFL038C UTR4P32626 227 aa6.89□□□□□ -1.31
YPT1YFL038C RRN6P32786 894 aa6.89□□□□□ -1.31
YPT1YFL038C SHP1P34223 423 aa6.89□□□□□ -1.31
YPT1YFL038C SLI15P38283 698 aa6.89□□□□□ -1.31
YPT1YFL038C GPB2P39717 880 aa6.89□□□□□ -1.31
YPT1YFL038C DSN1P40568 576 aa6.89□□□□□ -1.31
YPT1YFL038C AVT1P47082 602 aa6.89□□□□□ -1.31
YPT1YFL038C CPR7P47103 393 aa6.89□□□□□ -1.31
YPT1YFL038C HSH155P49955 971 aaKnown RBP6.89□□□□□ -1.31
YPT1YFL038C RTT102P53330 157 aa6.89□□□□□ -1.31
YPT1YFL038C SHR3Q02774 210 aa6.89□□□□□ -1.31
YPT1YFL038C YDR338CQ05497 695 aa6.89□□□□□ -1.31
YPT1YFL038C SVF1Q05515 481 aa6.89□□□□□ -1.31
YPT1YFL038C COQ9Q05779 260 aa6.89□□□□□ -1.31
YPT1YFL038C DUS4Q06063 367 aa6.89□□□□□ -1.31
YPT1YFL038C IWR1Q07532 353 aaPredicted RBP6.89□□□□□ -1.31
YPT1YFL038C IES4Q08561 116 aa6.89□□□□□ -1.31
YPT1YFL038C AIM7Q12156 149 aa6.89□□□□□ -1.31
YPT1YFL038C NCR1Q12200 1170 aa6.89□□□□□ -1.31
YPT1YFL038C GIS3Q12418 502 aa6.89□□□□□ -1.31
YPT1YFL038C YLR278CQ05854 1341 aa6.89□□□□□ -1.31
YPT1YFL038C ARD1P07347 238 aaPredicted RBP6.88□□□□□ -1.31
YPT1YFL038C NAT1P12945 854 aaKnown RBP6.88□□□□□ -1.31
YPT1YFL038C PMR1P13586 950 aa6.88□□□□□ -1.31
YPT1YFL038C PMS1P14242 873 aa6.88□□□□□ -1.31
YPT1YFL038C POL3P15436 1097 aa6.88□□□□□ -1.31
YPT1YFL038C SPO16P17122 198 aa6.88□□□□□ -1.31
YPT1YFL038C TKL1P23254 680 aaKnown RBP6.88□□□□□ -1.31
YPT1YFL038C CDC48P25694 835 aaKnown RBP6.88□□□□□ -1.31
YPT1YFL038C NIP1P32497 812 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms