Protein–RNA interactions for Protein: P14242

PMS1, DNA mismatch repair protein PMS1, yeastyeast

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PMS1P14242 NSR1YGR159C 1245 nt21.29■■□□□ 1
PMS1P14242 YML009W-BYML009W-B 477 nt21.27■■□□□ 1
PMS1P14242 NOP1YDL014W 984 nt20.62■□□□□ 0.89
PMS1P14242 MDJ1YFL016C 1536 nt19.07■□□□□ 0.64
PMS1P14242 YKL036CYKL036C 393 nt18.82■□□□□ 0.6
PMS1P14242 SRX1YKL086W 384 nt17.98■□□□□ 0.47
PMS1P14242 Q0297Q0297 156 nt17.94■□□□□ 0.46
PMS1P14242 YJL027CYJL027C 417 nt17.62■□□□□ 0.41
PMS1P14242 YCR051WYCR051W 669 nt17.07■□□□□ 0.32
PMS1P14242 SCS3YGL126W 1143 nt17.01■□□□□ 0.31
PMS1P14242 DBP2YNL112W 1641 nt16.76■□□□□ 0.27
PMS1P14242 TRN1tP(UGG)A 72 nt16.36■□□□□ 0.21
PMS1P14242 SUF9tP(UGG)F 72 nt16.36■□□□□ 0.21
PMS1P14242 SUF8tP(UGG)H 72 nt16.36■□□□□ 0.21
PMS1P14242 tP(UGG)LtP(UGG)L 72 nt16.36■□□□□ 0.21
PMS1P14242 SUF7tP(UGG)M 72 nt16.36■□□□□ 0.21
PMS1P14242 tP(UGG)N1tP(UGG)N1 72 nt16.36■□□□□ 0.21
PMS1P14242 tP(UGG)N2tP(UGG)N2 72 nt16.36■□□□□ 0.21
PMS1P14242 tP(UGG)O1tP(UGG)O1 72 nt16.36■□□□□ 0.21
PMS1P14242 SUF11tP(UGG)O2 72 nt16.36■□□□□ 0.21
PMS1P14242 YBR190WYBR190W 312 nt16.33■□□□□ 0.2
PMS1P14242 YOL085CYOL085C 342 nt16.28■□□□□ 0.2
PMS1P14242 CCC1YLR220W 969 nt16.22■□□□□ 0.19
PMS1P14242 RPP1BYDL130W 321 nt16.11■□□□□ 0.17
PMS1P14242 PKP1YIL042C 1185 nt16.07■□□□□ 0.16
PMS1P14242 RTC3YHR087W 336 nt15.99■□□□□ 0.15
PMS1P14242 RVS167YDR388W 1449 nt15.81■□□□□ 0.12
PMS1P14242 SCJ1YMR214W 1134 nt15.6■□□□□ 0.09
PMS1P14242 tP(UGG)O3tP(UGG)O3 72 nt15.42■□□□□ 0.06
PMS1P14242 PET122YER153C 765 nt15.4■□□□□ 0.06
PMS1P14242 SCR1SCR1 522 nt15.24■□□□□ 0.03
PMS1P14242 SHR5YOL110W 714 nt15.17■□□□□ 0.02
PMS1P14242 ATS1YAL020C 1002 nt15.15■□□□□ 0.02
PMS1P14242 RRN5YLR141W 1092 nt14.94□□□□□ -0.02
PMS1P14242 PUT4YOR348C 1884 nt14.93□□□□□ -0.02
PMS1P14242 YDJ1YNL064C 1230 nt14.93□□□□□ -0.02
PMS1P14242 URN1YPR152C 1398 nt14.87□□□□□ -0.03
PMS1P14242 DEP1YAL013W 1218 nt14.8□□□□□ -0.04
PMS1P14242 OPI9YLR338W 858 nt14.69□□□□□ -0.06
PMS1P14242 RPN10YHR200W 807 nt14.65□□□□□ -0.06
PMS1P14242 YER088W-BYER088W-B 147 nt14.64□□□□□ -0.07
PMS1P14242 SAH1YER043C 1350 nt14.63□□□□□ -0.07
PMS1P14242 GAR1YHR089C 618 nt14.63□□□□□ -0.07
PMS1P14242 ARE1YCR048W 1833 nt14.6□□□□□ -0.07
PMS1P14242 RSB1YOR049C 1065 nt14.6□□□□□ -0.07
PMS1P14242 YNL208WYNL208W 600 nt14.56□□□□□ -0.08
PMS1P14242 POA1YBR022W 534 nt14.47□□□□□ -0.09
PMS1P14242 YHR049C-AYHR049C-A 297 nt14.46□□□□□ -0.09
PMS1P14242 SSA3YBL075C 1950 nt14.34□□□□□ -0.11
PMS1P14242 PUN1YLR414C 792 nt14.28□□□□□ -0.12
PMS1P14242 BSC6YOL137W 1494 nt14.19□□□□□ -0.14
PMS1P14242 YJR018WYJR018W 363 nt14.18□□□□□ -0.14
PMS1P14242 TIR1YER011W 765 nt14.15□□□□□ -0.14
PMS1P14242 BUD23YCR047C 828 nt14.13□□□□□ -0.15
PMS1P14242 PTC2YER089C 1395 nt14.11□□□□□ -0.15
PMS1P14242 PST2YDR032C 597 nt14.05□□□□□ -0.16
PMS1P14242 SSA1YAL005C 1929 nt13.99□□□□□ -0.17
PMS1P14242 NAB2YGL122C 1578 nt13.97□□□□□ -0.17
PMS1P14242 RPP2BYDR382W 333 nt13.88□□□□□ -0.19
PMS1P14242 YJR120WYJR120W 351 nt13.85□□□□□ -0.19
PMS1P14242 DAL1YIR027C 1383 nt13.75□□□□□ -0.21
PMS1P14242 FPR4YLR449W 1179 nt13.74□□□□□ -0.21
PMS1P14242 FIS1YIL065C 468 nt13.72□□□□□ -0.21
PMS1P14242 INM2YDR287W 879 nt13.71□□□□□ -0.21
PMS1P14242 SRB2YHR041C 633 nt13.67□□□□□ -0.22
PMS1P14242 PHO4YFR034C 939 nt13.61□□□□□ -0.23
PMS1P14242 SPT5YML010W 3192 nt13.58□□□□□ -0.24
PMS1P14242 BDH2YAL061W 1254 nt13.54□□□□□ -0.24
PMS1P14242 YBL100CYBL100C 315 nt13.54□□□□□ -0.24
PMS1P14242 SHU1YHL006C 453 nt13.53□□□□□ -0.24
PMS1P14242 WWM1YFL010C 636 nt13.48□□□□□ -0.25
PMS1P14242 YKL097CYKL097C 411 nt13.43□□□□□ -0.26
PMS1P14242 YPS1YLR120C 1710 nt13.41□□□□□ -0.26
PMS1P14242 YAL037C-BYAL037C-B 975 nt13.39□□□□□ -0.27
PMS1P14242 YGR021WYGR021W 873 nt13.38□□□□□ -0.27
PMS1P14242 FUN26YAL022C 1554 nt13.37□□□□□ -0.27
PMS1P14242 MEP2YNL142W 1500 nt13.34□□□□□ -0.27
PMS1P14242 TRM9YML014W 840 nt13.33□□□□□ -0.28
PMS1P14242 LSM3YLR438C-A 270 nt13.32□□□□□ -0.28
PMS1P14242 YHR165W-AYHR165W-A 312 nt13.3□□□□□ -0.28
PMS1P14242 YDR095CYDR095C 411 nt13.29□□□□□ -0.28
PMS1P14242 YFL021C-AYFL021C-A 855 nt13.28□□□□□ -0.28
PMS1P14242 HOM6YJR139C 1080 nt13.28□□□□□ -0.28
PMS1P14242 ALF1YNL148C 765 nt13.25□□□□□ -0.29
PMS1P14242 SSA4YER103W 1929 nt13.22□□□□□ -0.29
PMS1P14242 MNP1YGL068W 585 nt13.19□□□□□ -0.3
PMS1P14242 CCT6YDR188W 1641 nt13.17□□□□□ -0.3
PMS1P14242 SUF2tP(AGG)C 72 nt13.12□□□□□ -0.31
PMS1P14242 SUF10tP(AGG)N 72 nt13.12□□□□□ -0.31
PMS1P14242 DCW1YKL046C 1350 nt13.11□□□□□ -0.31
PMS1P14242 RKM5YLR137W 1104 nt13.1□□□□□ -0.31
PMS1P14242 RPP2AYOL039W 321 nt13.06□□□□□ -0.32
PMS1P14242 SIS1YNL007C 1059 nt13□□□□□ -0.33
PMS1P14242 Q0182Q0182 405 nt12.98□□□□□ -0.33
PMS1P14242 PTP1YDL230W 1008 nt12.97□□□□□ -0.33
PMS1P14242 EMI2YDR516C 1503 nt12.97□□□□□ -0.33
PMS1P14242 YMR090WYMR090W 684 nt12.94□□□□□ -0.34
PMS1P14242 YOL037CYOL037C 354 nt12.92□□□□□ -0.34
PMS1P14242 CAC2YML102W 1407 nt12.9□□□□□ -0.34
PMS1P14242 NPL3YDR432W 1245 nt12.89□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 10.9 ms